Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CTA-292E10.1	Gene	0	13.94	4.33	5.59	12.02	9.30	6.18	8.11	3.34	3.72	5.76	1.91	2.67	5.96	2.17	7.29	6.63	3.08	5.63	11.40	2.76	9.61	6.27	10.67
2	458080	Transcript	0	18.85	3.41	2.72	10.10	9.15	11.79	11.97	2.09	2.06	4.81	2.23	0.68	1.17	1.07	5.40	4.36	1.01	4.82	10.34	0.97	8.31	7.43	10.12
3	418292	Transcript	0	4.96	2.68	3.75	5.66	4.71	5.79	3.49	4.14	2.12	4.24	0.28	0.00	3.64	0.56	1.93	3.02	0.48	1.08	5.14	0.94	2.26	2.74	6.44
4	451486	Transcript	0	12.57	6.04	1.36	3.52	4.64	0.91	4.92	0.00	0.46	1.69	0.00	6.37	11.88	0.73	3.13	1.47	0.82	0.46	3.94	1.58	2.24	1.03	3.68
5	422972	Transcript	0	2.94	0.63	1.98	3.78	2.89	1.13	0.63	0.40	1.71	1.32	0.00	2.19	1.76	1.32	5.98	1.38	2.04	4.14	5.42	0.99	3.41	1.58	2.27
6	ER1a	ExonRegion	0	4.14	1.39	1.28	2.73	1.22	5.83	8.55	0.00	0.00	1.36	0.26	0.00	0.00	1.70	11.21	3.11	1.35	2.52	1.59	1.74	3.21	1.89	7.48
7	ER1b	ExonRegion	0	40.98	6.10	6.83	18.87	11.92	31.95	29.97	3.56	2.06	6.33	4.80	0.00	0.00	4.48	14.68	16.21	3.30	13.27	14.77	2.13	21.04	19.07	33.19
8	E1_Da	NovelBoundary	0	83.27	2.96	40.89	58.27	36.93	15.79	57.68	13.23	1.79	15.66	2.68	0.00	5.68	9.89	45.49	35.89	30.67	25.87	36.52	29.91	50.35	17.70	71.02
9	E1a_E4a	KnownJunction	0	80.09	8.68	10.64	33.06	30.90	52.41	38.55	6.49	6.28	10.96	10.48	0.00	0.00	0.00	6.06	20.34	3.74	19.28	30.31	0.00	36.26	29.02	45.50
10	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	I1	Intron	0	15.56	2.89	11.70	11.24	6.14	2.90	3.98	3.26	2.33	4.73	1.53	23.18	4.34	4.28	8.64	5.64	6.26	6.90	8.82	5.72	8.19	3.95	12.07
12	I1_AR1	ActiveIntronRegion	0	14.92	2.56	13.17	15.16	6.18	2.04	2.83	4.00	1.99	5.20	1.79	28.09	3.10	5.14	11.13	6.91	6.15	6.86	8.19	5.82	10.50	4.91	13.43
13	I1_SR1	SilentIntronRegion	0	16.71	3.44	9.44	5.09	6.12	4.30	5.85	2.12	2.88	4.02	1.13	15.54	6.35	2.96	4.74	3.67	6.50	7.03	9.89	5.61	4.57	2.47	10.02
14	E2_Aa	NovelBoundary	0	75.57	3.09	19.40	34.09	83.28	5.68	47.25	8.42	7.73	15.53	0.00	36.61	13.31	9.36	6.06	24.52	18.61	5.89	14.12	6.26	6.24	3.06	37.30
15	ER2a	ExonRegion	0	25.13	12.08	2.71	7.04	9.27	1.82	9.83	0.00	0.91	3.39	0.00	12.74	23.77	1.47	6.25	2.94	1.63	0.91	7.89	3.16	4.47	2.06	7.36
16	E2_Da	NovelBoundary	0	28.89	2.43	20.14	25.04	25.64	13.63	15.32	4.39	3.21	3.12	0.00	12.60	13.47	2.47	20.89	4.19	0.00	1.99	17.60	12.66	2.41	6.25	0.00
17	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	I2	Intron	0	14.47	4.40	8.05	12.62	8.40	2.81	8.14	3.58	2.59	4.30	0.85	6.45	6.35	2.18	5.39	4.53	2.56	4.42	6.85	4.09	3.63	2.72	7.14
19	I2_SR1	SilentIntronRegion	0	15.26	5.11	9.62	14.47	8.54	2.99	7.91	3.75	2.81	4.91	0.88	7.36	6.91	2.23	5.18	4.92	2.63	4.64	7.10	4.72	3.52	2.96	6.58
20	I2_AR1	ActiveIntronRegion	0	13.14	3.43	4.11	8.18	8.52	1.97	10.55	4.04	1.88	4.01	1.21	4.48	6.42	2.70	6.62	4.03	3.56	3.84	5.75	2.29	4.12	2.32	6.66
21	I2_AR2	ActiveIntronRegion	0	17.75	2.21	5.66	9.88	11.12	1.45	9.62	3.41	2.67	1.59	0.60	7.63	5.80	1.98	6.55	3.47	1.02	2.71	8.54	3.02	5.36	1.22	12.66
22	I2_AR3	ActiveIntronRegion	0	35.16	0.00	2.31	5.45	6.39	12.84	13.17	1.73	1.24	0.13	0.00	4.33	3.39	0.00	7.41	2.97	0.00	5.54	7.43	3.66	11.75	0.69	23.49
23	I2_AR4	ActiveIntronRegion	0	4.87	0.00	3.06	6.13	0.00	12.84	14.56	2.59	1.98	1.15	0.00	2.16	16.88	0.00	1.16	0.00	0.00	5.54	3.19	0.00	3.97	0.00	17.03
24	E3_Aa	NovelBoundary	0	6.89	7.76	12.21	25.27	4.33	8.23	12.23	0.00	1.39	4.46	2.00	25.21	0.00	4.77	20.27	12.56	0.00	13.56	9.04	12.53	5.50	8.82	11.18
25	ER3a	ExonRegion	0	5.89	1.26	3.95	7.56	5.79	2.27	1.26	0.80	3.41	2.64	0.00	4.38	3.52	2.65	6.03	2.76	4.08	8.28	10.83	1.97	6.81	3.17	4.54
26	E3_Da	NovelBoundary	0	19.86	9.01	15.94	25.11	34.55	2.90	12.94	4.48	4.66	7.84	0.00	5.70	0.00	9.83	0.00	11.62	12.90	18.36	4.80	2.62	0.00	13.90	14.68
27	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	I3_AR1	ActiveIntronRegion	0	16.80	5.05	6.89	15.43	7.09	3.41	7.60	4.55	2.55	3.41	0.00	4.35	4.24	3.45	8.00	7.24	1.29	8.46	7.39	4.17	5.42	5.06	9.72
29	E4_Aa	NovelBoundary	0	2.82	8.95	12.71	11.69	0.00	12.27	16.87	3.94	2.92	3.63	0.00	0.00	0.00	2.24	0.00	8.72	17.39	13.14	0.00	6.52	5.99	5.94	3.24
30	ER4a	ExonRegion	0	19.12	4.57	10.83	27.80	11.71	7.07	13.07	5.05	8.17	10.43	7.62	0.90	0.77	3.87	12.25	16.39	8.24	12.60	14.82	5.22	22.80	12.40	20.84
31	E4_Da	KnownBoundary	0	47.64	6.18	6.59	17.91	16.30	5.79	5.74	0.00	4.86	4.22	0.00	0.00	12.66	0.00	10.88	16.66	0.00	6.43	17.60	2.56	6.30	8.76	39.10
32	E4a_E6a	KnownJunction	0	3.26	2.57	0.00	13.48	0.00	2.10	3.36	1.68	0.00	8.78	2.32	0.00	0.00	0.00	0.00	0.00	0.00	3.69	4.52	0.00	0.00	2.33	0.00
33	ER4b	ExonRegion	0	12.46	1.53	0.20	4.66	4.09	3.11	0.85	0.00	1.51	1.08	0.00	0.00	5.99	0.00	1.21	6.69	0.00	1.75	6.64	0.00	2.88	4.34	11.26
34	E4_Db	NovelBoundary	0	11.26	6.45	16.65	21.54	12.90	2.90	11.84	0.00	5.32	11.07	0.00	0.00	0.00	2.47	19.16	14.70	4.21	4.23	44.71	12.14	14.33	2.57	15.71
35	I4	Intron	0	19.51	3.85	5.69	12.98	11.35	3.67	8.05	3.86	2.70	6.22	0.54	3.79	6.09	1.73	5.10	5.22	2.99	5.03	7.55	3.46	5.86	3.80	9.73
36	I4_SR1	SilentIntronRegion	0	9.90	3.81	5.98	7.60	6.26	0.00	7.43	3.62	1.72	1.60	0.90	3.34	10.58	1.25	10.14	9.73	4.63	1.29	8.94	2.99	6.19	4.87	13.74
37	I4_SR2	SilentIntronRegion	0	20.35	4.16	6.66	13.27	11.11	3.75	8.54	4.26	2.68	7.72	0.38	6.25	8.06	2.07	5.45	7.25	3.33	5.49	9.82	4.30	5.74	4.38	12.93
38	I4_AR1	ActiveIntronRegion	0	42.61	8.60	8.05	21.13	17.58	7.16	13.63	5.56	3.96	7.47	1.14	1.83	4.59	1.95	5.52	4.78	2.78	7.08	8.70	3.63	6.53	4.09	10.84
39	I4_SR3	SilentIntronRegion	0	14.34	2.56	4.30	11.28	10.52	3.04	6.45	3.15	2.49	4.86	0.54	2.02	4.40	1.41	4.43	3.24	2.65	4.38	5.20	2.71	5.81	3.17	6.41
40	I4	Intron	0	10.27	1.55	5.04	10.05	5.35	4.54	4.16	4.17	2.28	7.48	0.18	1.99	3.39	0.24	4.45	3.11	0.94	5.59	6.67	2.02	4.82	3.37	11.18
41	I4_SR1	SilentIntronRegion	0	10.31	1.55	5.06	10.09	5.37	4.55	4.17	4.18	2.28	7.51	0.18	1.99	3.40	0.24	4.47	3.12	0.95	5.61	6.69	2.03	4.84	3.38	11.22
42	E5_Aa	NovelBoundary	0	9.71	0.00	4.49	8.99	3.23	2.21	6.23	7.31	8.62	7.49	0.00	6.30	0.00	0.00	0.00	0.00	0.00	6.43	17.04	0.00	5.19	11.14	3.50
43	ER5a	ExonRegion	0	9.93	5.36	7.49	11.31	9.41	8.79	6.99	8.27	4.24	8.48	0.57	0.00	7.28	1.12	3.85	6.05	0.97	2.16	10.27	1.87	4.52	5.47	12.88
44	E5_Da	NovelBoundary	0	18.15	0.00	10.35	23.34	7.56	0.00	0.00	9.65	4.75	5.69	0.00	0.00	0.00	2.47	8.90	0.00	0.00	11.57	8.66	0.00	13.84	5.33	7.94
45	E6_Aa	NovelBoundary	0	46.67	3.29	19.69	29.37	18.93	5.51	6.32	10.93	4.51	9.97	0.00	12.15	0.00	0.00	0.00	0.00	0.00	1.70	7.91	0.00	0.00	6.25	6.57
46	ER6a	ExonRegion	0	18.56	7.22	0.00	7.06	13.09	5.55	12.91	2.01	6.06	3.61	0.34	3.02	0.00	0.29	10.73	0.00	0.00	0.68	14.09	1.49	3.08	8.85	5.99
47	E6_Da	NovelBoundary	0	15.93	8.95	20.08	86.57	34.04	18.17	38.82	8.38	7.55	18.53	0.00	11.85	6.49	6.89	29.92	0.00	8.70	2.57	22.49	0.00	13.78	5.45	11.18
48	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	4.50	0.00	0.00	0.00	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	E7_Aa	NovelBoundary	0	21.63	19.67	44.79	35.69	4.24	7.89	21.07	71.72	47.63	66.73	7.74	7.50	0.00	5.06	4.45	21.11	9.07	46.39	9.51	9.52	3.15	9.00	11.87
50	ER7a	ExonRegion	0	7.06	0.61	4.41	4.27	9.69	4.84	3.92	2.35	0.01	4.13	0.00	1.08	7.05	1.98	4.43	2.69	1.00	2.78	11.54	2.57	7.32	2.50	1.77