Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 XRCC6 Gene 0 421.27 701.64 697.09 584.91 491.23 372.94 527.35 452.77 312.32 670.89 1320.22 857.90 379.08 1257.29 1212.71 1055.15 1154.93 675.45 539.27 584.54 579.50 554.47 397.99 2 360079 Transcript 0 0.37 1.02 0.89 0.42 2.37 0.96 2.16 0.25 0.02 0.80 3.24 1.09 0.00 5.22 3.07 7.08 5.48 2.18 1.72 1.64 2.45 1.57 0.51 3 464116 Transcript 0 5.20 6.70 16.04 10.53 8.33 6.33 5.78 11.31 2.23 4.09 0.00 0.49 4.21 0.48 13.15 6.01 2.36 6.59 1.85 4.50 2.45 1.30 9.14 4 402580 Transcript 0 1.06 8.13 0.00 1.36 1.34 0.00 1.99 0.00 0.00 2.29 4.83 2.16 0.00 6.92 15.28 2.97 0.00 0.00 1.59 2.13 1.10 3.13 0.00 5 433991 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 428575 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 359308 Transcript 0 5.01 6.76 10.78 6.27 3.93 9.20 4.19 7.01 5.54 6.03 3.34 2.48 1.60 4.97 6.61 4.27 3.77 17.99 9.61 10.28 9.86 6.59 9.23 8 405878 Transcript 0 0.00 3.35 0.00 1.93 0.00 0.00 0.00 3.49 1.79 5.18 0.00 0.00 0.00 0.00 4.45 0.00 3.93 3.86 0.00 8.63 3.09 4.96 0.00 9 402409 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 405506 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 478914 Transcript 1 15.85 15.70 5.49 14.80 20.02 7.73 21.76 9.12 6.66 10.14 4.83 14.91 16.96 5.13 9.45 8.49 8.39 3.97 5.73 13.17 2.13 7.27 6.94 12 ER1a ExonRegion 0 0.37 1.02 0.89 0.42 2.37 0.96 2.16 0.25 0.02 0.80 3.24 1.09 0.00 5.22 3.07 7.08 5.48 2.18 1.72 1.64 2.45 1.57 0.51 13 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 5.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.36 4.82 8.12 3.83 0.00 0.00 0.00 2.97 3.00 0.00 14 E1_Ac KnownBoundary 0 14.00 33.68 7.27 7.03 28.18 22.37 44.96 9.16 1.24 6.45 99.39 0.00 6.33 61.51 71.33 92.37 132.21 33.58 33.51 29.53 43.24 31.05 16.13 15 ER1b ExonRegion 0 12.91 33.55 8.09 6.54 31.04 28.79 43.96 8.64 1.73 7.23 102.06 0.00 0.00 88.51 80.36 91.54 104.31 33.63 34.08 33.62 34.60 32.29 24.08 16 ER1c ExonRegion 1 196.52 273.86 60.09 88.08 413.95 255.98 527.52 50.77 37.51 71.87 700.93 7.70 72.26 954.56 471.83 562.94 735.24 184.09 251.05 218.28 340.11 249.25 187.84 17 E1a_E2e KnownJunction 1 2262.85 2851.20 445.99 513.29 2652.55 1886.75 3213.41 350.28 278.18 554.38 3567.96 59.87 75.16 3756.57 2121.03 3123.97 3406.92 1052.58 1311.76 1358.18 1579.28 1580.31 1268.33 18 ER1d ExonRegion 1 1176.88 1605.73 297.18 342.68 1535.06 1129.22 1880.95 250.55 196.65 396.38 2546.97 26.92 81.77 3052.71 1529.09 2098.45 2437.93 791.16 889.41 875.95 1112.78 1044.30 810.39 19 ER2a ExonRegion 0 3.86 7.41 3.36 1.85 3.66 14.20 3.01 5.86 1.96 3.48 3.71 2.71 0.00 6.66 5.60 2.71 3.60 16.61 12.00 11.85 7.99 8.56 10.70 20 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 2.58 2.16 6.30 0.00 2.12 0.00 0.00 4.68 4.77 4.14 0.00 10.93 0.00 0.00 21 ER2b ExonRegion 0 0.34 3.25 7.53 1.94 3.33 0.13 1.82 6.93 4.77 6.54 2.56 1.90 0.00 4.22 7.94 1.44 4.04 11.93 11.96 12.31 10.48 6.97 4.99 22 E2_Da KnownBoundary 0 0.00 0.00 11.29 5.06 8.66 0.00 0.00 6.61 5.01 2.79 0.00 0.00 0.00 0.00 0.00 3.33 0.00 20.52 8.38 0.00 3.09 5.69 15.02 23 E2a_E2e KnownJunction 0 0.00 3.35 0.00 1.93 0.00 0.00 0.00 3.49 1.79 5.18 0.00 0.00 0.00 0.00 4.45 0.00 3.93 3.86 0.00 8.63 3.09 4.96 0.00 24 ER2c ExonRegion 0 6.17 6.12 18.21 10.68 4.21 4.21 5.36 8.15 9.11 8.59 2.98 2.26 3.19 3.29 7.62 5.84 3.94 19.36 7.21 8.70 11.72 4.61 7.77 25 E2_Ac KnownBoundary 0 10.08 5.92 11.59 17.51 0.00 4.77 4.24 12.77 13.22 8.60 4.58 5.70 0.00 2.30 0.00 3.16 0.00 12.48 8.28 2.75 2.84 0.00 3.41 26 E2_Ad KnownBoundary 0 0.00 0.00 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E2_Ae KnownBoundary 0 14.52 13.09 11.62 8.52 0.00 0.00 1.99 4.39 7.49 8.00 6.69 0.00 6.82 2.47 5.19 0.00 7.85 8.83 0.00 6.52 6.30 9.06 13.06 28 ER2d ExonRegion 0 16.93 14.24 19.61 25.89 0.00 3.67 5.30 15.56 23.47 14.91 9.66 4.33 14.07 4.87 17.41 2.97 6.60 27.72 15.93 10.64 11.02 8.33 14.68 29 ER2e ExonRegion 1 310.52 400.03 92.43 99.88 313.83 234.99 391.33 82.97 84.87 122.39 553.36 12.37 26.13 510.67 296.34 456.01 510.70 212.49 216.15 241.03 241.46 201.51 187.95 30 ER2f ExonRegion 1 1006.05 1482.97 529.23 498.56 1113.36 830.25 1280.70 499.36 436.81 758.84 2042.93 443.63 413.26 972.97 850.34 1620.43 1780.63 927.44 773.08 850.68 743.02 682.40 616.66 31 E2b_E3a KnownJunction 1 212.85 420.39 384.26 355.47 384.38 140.54 303.44 293.97 247.94 473.90 1488.01 992.42 419.78 436.64 478.77 232.16 1088.17 150.89 183.53 331.99 678.38 266.12 81.69 32 E2b_E4a KnownJunction 0 0.00 2.63 2.31 2.76 0.00 0.00 11.57 2.46 0.00 3.98 0.00 6.30 6.82 0.00 0.00 0.00 0.00 2.16 0.00 3.26 0.00 0.00 0.00 33 ER3a ExonRegion 0 222.89 616.16 697.26 678.34 353.48 150.47 250.65 584.91 500.02 955.40 3283.89 1627.34 770.66 2070.02 1446.31 1512.31 2648.69 632.63 788.17 1163.71 1011.62 1058.13 525.30 34 E3_Da KnownBoundary 0 12.89 5.53 43.11 24.37 7.98 0.00 5.79 28.09 7.00 7.12 0.00 0.00 7.30 3.00 11.00 25.29 7.20 15.84 0.00 12.08 8.46 0.00 15.28 35 E3a_E4a KnownJunction 1 205.00 1058.82 1072.58 1164.42 378.61 247.98 331.49 849.00 624.91 1223.11 1502.85 2821.22 1298.94 1810.42 2710.68 3143.19 1184.85 1328.62 1262.15 1472.59 279.23 1392.02 1171.78 36 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER3b ExonRegion 0 5.20 6.70 16.04 10.53 8.33 6.33 5.78 11.31 2.23 4.09 0.00 0.49 4.21 0.48 13.15 6.01 2.36 6.59 1.85 4.50 2.45 1.30 9.14 38 ER4a ExonRegion 0 152.39 1000.09 1119.90 1133.79 1404.51 1123.25 1720.87 778.56 634.82 1194.62 2181.04 2748.51 1248.83 1746.54 1605.07 2008.85 1776.97 1032.88 880.09 1233.73 596.17 1243.58 706.88 39 E4a_E5a KnownJunction 1 787.25 2511.33 1621.82 1625.80 950.26 796.08 1331.42 1115.98 839.29 1611.07 2885.89 5166.18 1741.61 3447.31 3062.13 2757.31 2760.91 1644.29 1758.92 1716.62 1043.60 2036.32 1023.59 40 ER4b ExonRegion 1 545.36 1996.03 1377.15 1406.13 1086.89 973.75 1534.65 1001.58 749.39 1455.19 2944.32 4844.10 1901.34 3346.01 2750.77 2802.71 2660.52 1555.93 1614.13 1559.57 978.59 1884.06 961.46 41 ER5a ExonRegion 0 757.21 1388.77 1035.18 925.06 659.48 557.71 722.08 761.77 586.55 1189.74 2672.09 2889.50 1208.76 2710.08 2014.79 2056.18 2444.48 1469.59 1093.29 1154.45 1250.92 1140.19 757.25 42 E5a_E6a KnownJunction 0 368.21 1011.27 952.75 752.39 805.26 663.03 820.59 621.20 477.71 1017.07 2449.94 1701.55 537.46 2473.14 1744.98 1872.16 2164.84 1364.65 1115.14 1165.85 1090.12 905.83 717.56 43 ER6a ExonRegion 0 344.28 767.76 910.53 671.11 591.56 514.62 688.29 634.43 463.97 1020.83 1999.30 1509.64 504.89 2353.67 1682.13 1883.21 1858.46 1281.28 914.58 908.40 970.49 845.66 690.40 44 E6a_E7a KnownJunction 0 429.34 921.22 911.65 608.91 543.89 496.59 771.96 681.83 462.87 1077.97 2190.98 913.05 415.56 2301.74 1435.32 1732.37 1886.11 1029.33 915.32 896.57 887.56 878.03 665.66 45 ER7a ExonRegion 0 532.75 908.92 956.42 751.09 745.57 681.51 900.91 676.36 453.54 1084.07 1888.73 1188.94 552.42 1869.32 1407.81 1629.36 1749.93 993.46 828.04 772.82 853.66 809.93 590.22 46 E7a_E8a KnownJunction 0 944.39 1230.50 1090.38 910.74 1088.54 651.67 1123.23 731.45 459.78 1100.75 2259.05 1904.57 1037.43 2712.59 1999.88 2172.68 2233.75 1016.52 976.12 1042.04 1024.39 918.56 859.09 47 ER8a ExonRegion 0 583.52 982.59 1115.29 949.54 725.81 596.70 841.73 688.43 517.64 1174.15 1922.56 1494.13 680.67 1809.02 1489.13 1504.70 1885.46 1181.83 756.61 778.14 942.08 786.44 607.19 48 E8a_E9a KnownJunction 0 559.88 786.04 1128.73 838.62 591.85 503.52 642.39 638.04 496.78 994.72 1441.94 1111.26 511.82 1773.27 1432.23 1467.05 1278.82 1026.14 573.76 807.21 677.45 725.37 624.52 49 ER9a ExonRegion 0 555.14 1067.73 1173.70 916.39 688.97 670.93 915.40 709.77 535.06 1126.61 2159.00 1231.01 492.77 1909.96 1841.11 1808.30 1743.57 1290.41 781.59 867.44 982.95 697.09 701.75 50 E9a_E10a KnownJunction 0 857.11 1251.68 1382.71 1039.13 1095.33 779.84 1227.19 767.10 600.40 1218.89 2688.21 953.26 455.98 2654.26 2810.07 2017.42 1985.97 1180.18 932.26 1143.80 1171.85 964.43 883.17 51 ER10a ExonRegion 0 767.80 1162.73 1388.97 1035.69 933.21 749.02 1112.15 779.13 548.29 1222.22 2265.62 708.33 391.02 2153.71 1894.40 1761.19 1802.29 1219.04 786.41 979.01 996.16 696.92 740.78 52 E10_Ab KnownBoundary 1 1282.60 1670.76 1610.53 1131.59 1220.37 871.77 1404.46 884.45 575.02 1352.31 2408.03 711.68 584.38 2520.53 2347.74 2172.76 1981.67 1218.85 944.59 1191.99 965.83 699.41 835.11 53 ER10b ExonRegion 0 817.40 1455.19 1358.30 1119.22 811.94 683.94 916.94 781.46 530.11 1242.30 2249.97 866.50 442.17 2535.19 2596.18 2135.27 1897.60 1244.10 1109.55 989.90 1025.20 949.24 860.92 54 E10a_E11a KnownJunction 0 1111.31 1977.61 1640.13 1407.38 862.48 598.80 913.68 882.85 606.16 1314.01 2591.45 770.35 367.35 2646.90 2840.48 2464.99 1965.31 1325.18 1193.26 957.22 1075.98 1057.62 1076.86 55 ER11a ExonRegion 0 1119.89 1443.38 1496.68 1104.75 791.33 532.40 734.51 816.65 522.71 1143.50 2026.63 664.04 329.70 2067.50 2142.22 1612.22 1698.43 999.65 773.63 866.94 994.61 748.87 662.26 56 E11a_E12a KnownJunction 0 1130.20 1562.55 1388.15 1057.51 1190.75 706.13 1032.08 877.38 492.18 1149.66 2021.25 943.81 397.70 2109.20 2494.60 1398.78 1483.78 881.63 704.49 1074.26 876.87 756.48 592.85 57 ER12a ExonRegion 0 1184.19 1475.13 1845.19 1595.33 1150.20 657.47 991.37 1101.21 569.43 1321.03 2302.93 964.41 369.24 2349.92 2840.94 1891.58 1763.43 1184.63 1052.51 1058.81 969.03 1029.70 781.79 58 E12_Da KnownBoundary 0 10.96 6.12 0.00 8.39 7.64 5.79 19.56 11.30 4.40 15.55 11.21 5.70 6.82 10.01 4.45 10.77 13.46 8.95 0.00 12.66 2.41 18.98 3.59 59 E12a_E13a KnownJunction 0 2686.18 1841.91 2227.01 1860.34 1095.67 630.32 1013.05 1233.99 590.39 1246.61 2138.44 914.40 365.40 2434.06 3726.94 1916.68 1742.12 1044.63 1037.68 976.34 1033.47 1033.01 789.01 60 E12a_E13b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 ER12b ExonRegion 0 15.85 15.70 5.49 14.80 20.02 7.73 21.76 9.12 6.66 10.14 4.83 14.91 16.96 5.13 9.45 8.49 8.39 3.97 5.73 13.17 2.13 7.27 6.94 62 E13_Ab NovelBoundary 0 656.26 1135.26 1053.78 918.36 477.42 415.95 599.60 676.04 349.53 729.92 1237.16 415.19 208.43 1329.51 1969.10 1180.97 978.49 546.65 661.57 741.44 448.13 689.73 447.39 63 ER13a ExonRegion 0 1530.45 1530.88 1868.45 1534.68 758.98 556.28 793.91 1137.75 556.42 1229.02 1961.89 741.20 314.00 2144.08 3068.80 1768.86 1553.73 1030.03 901.46 954.46 834.21 934.77 675.28 64 ER13b ExonRegion 0 615.28 1448.51 1567.15 1256.40 634.80 576.36 831.16 1078.46 579.90 1269.16 1874.76 691.78 255.80 2043.49 3286.96 1564.06 1413.68 1019.06 761.82 1058.77 740.21 983.25 579.15 65 E13_Da KnownBoundary 0 445.63 1594.39 1235.62 940.21 945.42 663.14 1078.41 874.71 509.20 1137.60 1856.36 839.67 301.12 2039.98 3257.19 1475.08 1423.84 851.41 713.15 1186.24 801.07 1100.24 562.37 66 ER13c ExonRegion 0 618.34 845.80 1049.34 861.98 565.74 296.34 395.07 607.43 328.42 770.52 1227.40 457.63 219.54 1243.80 2204.01 924.22 1110.27 610.87 597.60 641.23 638.85 627.60 317.94 67 E13_Db KnownBoundary 1 4036.42 2359.19 611.60 606.85 1911.97 748.21 961.47 296.14 143.40 377.57 1083.91 466.05 461.82 1616.23 3719.77 1113.72 1330.25 352.48 887.93 564.01 714.21 366.91 345.46 68 ER13d ExonRegion 1 1353.97 891.94 301.62 300.47 654.79 260.46 348.67 118.34 61.09 152.05 472.04 231.16 210.72 785.73 1706.04 455.69 559.27 189.13 388.16 216.26 339.92 160.06 144.11 69 ER13e ExonRegion 0 59.26 74.73 21.14 20.44 42.14 23.38 26.15 22.04 11.42 22.36 84.56 33.55 11.73 101.91 160.29 40.12 36.31 23.10 15.13 48.94 41.87 27.61 19.09 70 ER13f ExonRegion 0 8.47 26.44 0.00 5.45 10.70 0.00 6.62 3.46 0.00 6.88 28.99 4.33 0.00 32.48 55.12 8.92 3.30 3.70 6.37 10.64 8.81 10.42 8.81 71 ER13g ExonRegion 0 2.12 16.27 0.00 2.73 2.68 0.00 3.97 0.00 0.00 4.59 9.66 4.33 0.00 11.37 26.11 5.94 0.00 0.00 3.19 4.26 2.20 6.25 0.00