Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC117 Gene 0 108.77 105.68 78.32 106.24 117.13 61.72 92.92 86.17 67.58 94.89 127.28 295.75 209.25 159.38 117.31 118.28 140.36 39.05 47.42 60.38 43.95 128.52 66.53 2 421503 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 249064 Transcript 0 4.62 20.69 6.41 10.67 8.66 12.63 9.27 11.46 14.08 16.18 27.90 11.39 17.69 48.37 27.62 34.86 56.10 28.35 6.96 10.19 28.60 18.06 14.26 4 453543 Transcript 0 0.29 0.27 0.28 0.54 0.00 0.00 1.35 0.00 0.78 0.23 0.49 0.00 0.52 0.27 0.82 4.47 0.06 0.43 3.81 4.34 1.21 0.02 0.40 5 444523 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 448492 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 443309 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 432510 Transcript 0 1.48 0.00 1.27 1.06 0.93 0.00 0.23 0.00 0.96 0.00 0.00 0.62 0.00 0.20 0.86 0.00 0.00 0.00 0.00 0.77 0.77 0.73 0.51 9 ER1a ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 1.32 0.00 0.00 1.59 6.55 0.00 0.00 0.73 1.78 5.27 2.45 4.11 0.00 0.21 0.92 1.61 4.07 10 E1_Ac KnownBoundary 1 9.85 3.09 2.96 1.76 4.24 33.39 8.70 6.04 9.40 10.99 85.71 0.00 0.00 60.57 29.67 82.97 105.66 30.88 8.19 6.46 33.17 38.64 88.01 11 ER1b ExonRegion 1 3.79 1.44 2.04 1.36 2.45 11.84 4.58 3.24 2.01 5.64 48.64 0.00 0.00 28.63 13.66 40.50 52.95 10.62 3.58 3.90 17.54 17.36 47.48 12 ER1c ExonRegion 1 2.84 1.44 1.51 0.24 1.63 6.98 3.24 1.54 3.86 5.17 32.49 6.64 0.82 17.53 9.11 23.48 33.12 7.44 6.03 1.88 13.59 12.95 21.88 13 E1_Ae KnownBoundary 0 0.00 0.00 0.00 1.50 0.00 0.00 1.63 1.85 1.71 4.70 30.11 0.00 5.84 2.35 14.22 3.59 21.97 6.63 0.00 0.00 17.67 0.00 0.00 14 ER1d ExonRegion 1 0.00 0.00 3.68 0.00 2.68 0.00 0.00 0.00 4.94 6.88 33.83 10.82 4.69 9.74 8.70 2.97 29.71 5.54 1.59 1.06 25.34 0.00 0.00 15 ER1e ExonRegion 1 0.00 0.08 3.68 0.00 0.43 0.81 0.00 0.00 3.95 7.25 54.74 4.68 3.56 15.98 15.09 2.97 65.75 4.07 0.00 4.00 32.97 6.33 2.00 16 E1_Db KnownBoundary 1 0.00 0.00 5.26 1.90 0.00 2.78 0.00 2.18 6.51 7.52 61.12 6.90 0.00 18.48 19.28 3.76 128.75 0.00 0.00 9.14 48.68 14.94 4.35 17 E1b_E4c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER1f ExonRegion 1 0.00 0.00 3.68 0.00 0.00 1.83 0.00 0.00 3.71 8.19 61.30 4.33 0.00 21.58 15.75 2.97 93.84 3.70 0.00 6.38 38.09 12.50 2.94 19 ER1g ExonRegion 0 2.24 9.08 6.68 3.20 6.99 5.48 5.12 12.54 13.11 16.37 46.83 7.32 21.78 75.61 29.39 55.84 60.85 44.97 19.78 20.53 36.74 26.54 38.89 20 E1_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.16 2.26 0.00 0.00 4.77 4.70 4.02 0.00 1.74 0.00 0.00 0.00 0.00 0.00 21 E1c_E3a KnownJunction 0 2.89 41.37 11.59 19.98 11.97 25.27 14.57 22.92 28.15 32.37 55.80 18.46 35.39 95.12 49.45 69.73 112.20 56.71 13.93 20.39 57.21 36.13 28.51 22 E1c_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER1h ExonRegion 0 0.57 0.55 0.56 1.08 0.00 0.00 0.80 0.00 0.45 0.46 0.97 0.00 1.04 0.55 1.64 1.34 0.12 0.85 0.27 3.17 2.43 0.03 0.79 24 E1d_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.90 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 7.60 0.00 0.00 7.34 5.50 0.00 0.00 0.00 25 ER2a ExonRegion 0 2.96 0.00 2.54 2.13 1.87 0.00 0.46 0.00 1.93 0.00 0.00 1.25 0.00 0.40 1.73 0.00 0.00 0.00 0.00 1.53 1.54 1.46 1.03 26 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3a ExonRegion 1 10.90 39.96 22.67 26.58 44.30 44.11 33.49 29.48 43.37 37.10 111.86 71.20 49.51 146.74 46.69 65.83 127.02 61.04 29.91 56.19 80.27 61.77 33.99 28 E3a_E4a KnownJunction 0 20.45 34.80 28.56 39.19 46.60 56.10 64.30 40.01 53.85 43.25 104.71 152.60 92.85 163.64 62.43 70.58 155.40 56.00 42.26 32.79 81.86 80.46 32.52 29 ER4a ExonRegion 0 30.28 85.94 37.03 59.61 35.44 25.12 43.20 54.90 75.30 80.05 160.65 166.06 170.35 187.83 91.70 103.92 177.22 70.78 32.99 75.73 90.22 95.97 54.62 30 E4_Ab KnownBoundary 0 43.64 48.74 25.55 31.50 19.78 5.22 25.61 25.63 43.00 50.15 127.61 91.68 83.44 73.64 34.61 63.91 116.78 34.20 17.60 48.26 71.29 89.16 38.84 31 E4_Ac KnownBoundary 0 21.49 69.59 12.98 28.57 12.05 0.00 28.26 20.00 23.70 35.70 93.18 69.92 76.13 119.08 46.36 65.45 113.88 15.71 8.94 44.29 36.45 47.09 25.52 32 ER4b ExonRegion 0 43.84 103.13 51.29 58.99 26.76 5.76 39.72 65.43 86.28 99.29 229.74 225.75 232.49 237.12 85.38 109.12 260.77 66.26 19.11 90.27 112.39 122.93 56.64 33 ER4c ExonRegion 1 30.50 151.14 53.74 68.14 37.78 20.87 49.03 62.58 92.49 102.18 221.49 241.43 220.29 268.65 79.10 120.72 248.15 61.63 37.47 81.98 88.60 114.10 68.67 34 E4_Da KnownBoundary 1 24.60 211.02 63.57 65.26 56.88 45.43 57.23 61.36 88.97 81.71 205.21 304.00 242.68 246.93 58.10 125.27 208.04 50.49 60.61 74.21 82.16 126.26 92.62 35 ER4d ExonRegion 0 28.07 179.60 61.36 101.94 72.79 36.28 49.10 54.96 96.97 111.78 180.29 338.70 212.41 230.48 113.57 170.14 217.00 83.18 67.08 84.98 82.56 190.51 86.87 36 E4b_E5a KnownJunction 0 24.45 153.39 64.22 135.11 136.08 42.93 60.37 61.45 95.17 112.55 147.25 513.17 336.18 219.79 141.42 237.97 190.74 107.70 69.08 97.92 50.16 241.99 122.07 37 ER5a ExonRegion 0 29.88 117.55 66.46 115.19 92.58 57.58 93.03 75.64 102.70 114.96 186.78 574.50 379.08 252.87 110.00 217.42 268.23 84.43 81.11 113.71 74.10 216.91 105.27 38 E5_Da NovelBoundary 0 3.70 3.35 12.77 37.12 3.31 5.79 3.84 19.30 12.76 11.66 5.37 32.11 30.84 4.94 4.45 15.64 9.54 2.57 9.51 14.45 0.00 2.57 12.72 39 E5a_E6a KnownJunction 1 53.19 193.32 71.76 146.73 95.16 70.02 120.34 102.32 112.61 121.01 232.06 597.64 344.94 274.71 86.41 296.50 298.36 98.04 118.97 129.37 102.92 299.43 167.40 40 E6_Aa NovelBoundary 0 106.98 32.36 33.74 50.28 22.67 7.21 10.47 23.17 18.78 12.41 2.16 12.00 20.45 9.18 9.64 11.96 7.67 8.12 12.71 8.82 3.15 46.97 28.08 41 ER6a ExonRegion 0 45.29 164.72 72.05 130.56 88.30 56.85 112.54 88.15 103.50 124.32 216.10 714.36 369.57 297.21 107.35 291.86 318.21 101.26 114.67 117.02 109.74 277.94 162.69 42 ER6b ExonRegion 1 54.25 190.21 48.80 81.30 116.59 66.74 96.29 57.41 75.06 100.03 170.03 595.40 347.79 235.65 81.99 182.01 238.02 67.62 57.83 92.83 98.96 169.88 117.08 43 E6_Db KnownBoundary 0 47.79 175.30 34.95 54.74 127.33 34.01 125.51 54.75 79.92 90.15 121.45 464.55 301.93 213.85 81.83 112.53 166.62 48.38 52.33 52.73 51.65 104.71 51.22 44 ER6c ExonRegion 1 46.17 146.77 57.59 76.80 86.34 63.59 88.24 65.07 78.39 95.91 179.54 505.20 349.16 263.58 85.38 151.62 176.30 66.55 57.46 73.75 86.04 129.02 100.65 45 E6_Dc KnownBoundary 1 46.60 112.68 60.88 100.45 115.03 77.97 65.32 80.96 80.67 103.07 207.05 421.64 205.18 249.22 94.94 174.91 155.31 46.51 41.88 106.49 66.60 155.96 91.17 46 ER6d ExonRegion 0 54.16 77.84 61.53 95.95 101.69 54.96 93.74 95.25 85.52 100.89 162.62 393.27 268.95 203.33 89.44 127.16 152.68 34.17 36.02 73.46 27.19 145.61 77.07 47 E6_Dd KnownBoundary 0 116.24 101.03 85.89 92.76 104.58 32.94 76.09 99.97 98.73 125.42 149.77 423.74 302.74 148.92 79.61 83.74 164.00 35.82 56.57 48.07 29.04 199.74 45.24 48 ER6e ExonRegion 0 167.57 132.72 109.24 143.91 162.99 82.68 123.61 114.40 77.98 118.67 138.16 330.57 236.94 170.52 159.07 134.73 152.14 38.55 58.80 66.42 44.26 153.43 73.56 49 ER6f ExonRegion 0 6.35 0.00 1.23 1.36 5.35 0.00 3.97 0.00 0.00 0.00 0.00 4.33 0.00 1.62 5.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 IG27_AR2 ActiveIntergenicRegion 0 19.83 8.82 13.30 10.22 6.50 2.53 12.40 4.47 7.66 3.56 3.35 84.79 29.15 5.27 51.70 6.70 21.76 1.12 9.38 10.33 3.06 12.65 12.74