Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RNF185	Gene	0	90.11	108.04	79.09	118.45	92.61	114.08	84.54	93.01	89.44	100.26	127.00	90.45	88.40	136.35	118.09	141.41	121.23	104.63	100.72	63.94	152.06	153.19	145.63
2	426256	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	424472	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	419966	Transcript	0	9.11	32.63	32.23	43.32	0.00	26.06	22.04	49.95	31.54	52.97	32.32	0.00	6.66	21.31	4.82	35.63	42.54	51.90	7.62	29.02	63.51	48.31	59.75
5	436825	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	494514	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	326132	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	471384	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	468921	Transcript	0	0.37	3.39	4.33	4.55	5.73	4.26	5.32	2.83	4.37	3.07	11.06	6.17	9.12	6.81	11.44	7.15	7.07	9.71	1.11	3.92	5.88	2.69	11.03
10	266252	Transcript	0	0.00	0.00	4.79	1.37	12.31	0.00	8.88	2.38	3.18	1.67	2.47	0.00	0.00	2.47	10.63	0.00	0.00	2.28	0.00	0.00	5.31	2.88	0.00
11	ER1a	ExonRegion	0	1.12	0.70	0.00	0.47	0.00	3.95	0.62	0.00	0.04	0.93	0.66	0.00	0.00	0.25	0.00	1.76	0.00	0.06	0.00	0.00	0.00	1.04	4.04
12	E1_Ac	KnownBoundary	0	3.56	3.35	1.83	0.00	0.00	8.57	4.50	0.00	0.00	0.00	2.68	0.00	0.00	0.00	0.00	4.36	0.00	0.00	0.00	0.00	0.00	3.12	13.06
13	E1_Ad	KnownBoundary	0	22.52	36.97	1.57	2.06	29.46	30.72	27.60	0.00	3.41	6.18	40.06	5.40	0.00	67.10	36.59	35.97	23.38	20.23	40.85	11.70	27.06	7.90	56.85
14	ER1b	ExonRegion	0	6.35	4.88	2.45	1.36	2.94	13.57	5.43	0.00	1.24	3.56	7.35	0.00	0.00	8.61	9.86	7.73	3.30	5.54	2.87	3.83	3.75	3.33	21.14
15	ER1c	ExonRegion	1	13.55	33.49	8.66	7.18	22.65	39.61	24.54	4.72	5.85	14.60	39.04	1.73	2.19	49.37	27.66	35.67	23.99	12.69	44.81	11.77	30.41	25.56	49.53
16	ER1d	ExonRegion	1	55.45	115.45	30.28	32.51	90.90	202.03	116.77	23.56	36.56	50.43	130.33	4.33	9.38	155.50	83.72	135.70	106.57	35.95	162.82	79.88	151.24	103.64	164.54
17	E1_Ae	KnownBoundary	1	104.83	180.56	51.51	58.03	159.85	360.19	201.96	38.77	64.70	74.43	186.36	5.40	5.84	157.28	77.51	205.07	148.85	154.87	221.28	135.12	224.68	167.90	255.24
18	ER1e	ExonRegion	1	43.35	62.13	29.37	32.23	59.54	120.66	68.74	31.52	51.46	59.05	74.58	17.82	7.82	61.80	64.89	94.51	95.45	45.98	58.35	58.76	127.15	68.55	131.90
19	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	3.40	0.00	0.00	3.89	0.00	3.12	0.00	7.95	0.00	0.00	4.94	4.70	7.78	0.00	6.59	0.00	0.00	2.41	0.00	7.60
20	E1a_E3a	KnownJunction	0	9.63	15.85	6.59	12.32	15.11	33.67	17.62	12.20	28.15	31.46	26.01	18.46	5.68	11.77	39.31	42.72	46.66	34.41	24.47	17.39	46.64	16.78	71.96
21	E1a_E4a	KnownJunction	0	0.00	2.57	0.00	0.00	0.00	2.16	1.68	0.00	3.24	6.50	2.47	0.00	0.00	0.00	0.00	3.33	3.55	0.00	0.00	0.00	2.35	0.00	3.33
22	ER2a	ExonRegion	0	1.10	6.95	4.83	3.74	9.04	8.36	9.84	1.34	2.39	3.02	15.50	18.51	20.53	10.54	25.16	13.68	16.54	9.99	3.32	3.00	9.74	4.95	13.63
23	E2_Da	NovelBoundary	0	404.37	608.31	221.40	330.99	370.88	433.61	742.15	255.81	225.81	229.05	191.89	155.75	170.12	116.78	162.93	376.06	486.96	336.68	257.42	641.86	321.86	233.42	371.33
24	E2a_E3a	KnownJunction	0	0.00	3.22	8.16	6.53	8.15	4.43	2.25	7.15	7.58	6.18	9.74	0.00	6.82	4.94	4.45	0.00	4.68	12.56	0.00	8.76	5.50	3.12	11.87
25	ER3a	ExonRegion	1	8.49	26.09	35.10	41.42	20.52	49.62	28.58	30.23	52.81	65.60	78.21	15.75	16.52	85.53	58.83	79.29	84.25	110.49	74.80	64.62	129.71	58.18	100.15
26	E4a_E7a	KnownJunction	0	0.00	0.00	4.79	1.37	12.31	0.00	8.88	2.38	3.18	1.67	2.47	0.00	0.00	2.47	10.63	0.00	0.00	2.28	0.00	0.00	5.31	2.88	0.00
27	ER4a	ExonRegion	1	15.48	38.32	28.89	32.06	48.02	125.86	64.11	24.20	66.57	61.51	66.23	12.08	23.20	69.32	54.82	66.64	71.23	56.31	51.13	57.22	140.57	53.62	74.03
28	ER5a	ExonRegion	1	32.33	67.81	35.90	47.77	35.93	93.79	48.53	39.90	60.67	69.29	101.14	25.84	30.92	122.50	64.33	112.70	106.81	81.55	66.96	66.93	145.67	105.32	110.00
29	E5_Da	NovelBoundary	0	15.11	55.06	35.95	44.75	17.49	43.50	16.69	30.39	35.91	37.53	61.12	37.21	53.73	98.95	75.90	78.01	75.08	71.05	55.53	38.35	103.85	74.64	80.75
30	E5a_E8c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E5b_E6a	KnownJunction	0	32.01	48.68	46.18	69.16	54.58	55.76	21.95	69.83	62.93	60.52	90.13	24.76	25.81	104.24	59.58	137.14	141.00	112.30	73.51	92.23	144.37	134.10	107.90
32	ER5b	ExonRegion	1	25.12	54.23	41.58	54.24	37.10	59.54	20.48	52.31	56.32	57.65	93.29	26.27	42.52	121.27	85.10	133.35	119.71	104.46	67.32	77.16	148.24	116.82	126.08
33	ER6a	ExonRegion	1	27.63	56.79	44.22	57.09	32.11	55.41	41.24	55.59	77.43	78.30	87.96	27.16	40.76	123.23	48.16	105.43	98.91	105.66	76.80	75.43	162.23	108.31	116.29
34	E6_Da	KnownBoundary	0	0.00	0.00	6.42	12.19	4.24	0.00	0.00	5.79	7.32	14.99	5.05	6.30	0.00	4.94	0.00	0.00	0.00	2.24	4.14	11.76	0.00	0.00	3.67
35	E6a_E7a	KnownJunction	1	20.67	52.16	46.18	48.01	24.11	47.13	46.42	52.82	84.43	88.54	105.92	30.31	40.09	137.91	47.59	130.14	102.57	107.70	44.71	68.33	157.96	132.57	166.12
36	ER6b	ExonRegion	0	7.85	13.53	8.13	13.13	5.84	4.13	12.45	7.64	11.68	13.41	4.39	5.98	9.64	4.67	4.75	0.81	10.50	6.35	9.73	10.56	2.76	5.91	2.14
37	E6_Db	KnownBoundary	0	24.60	29.93	9.55	23.81	10.10	12.15	33.03	6.86	16.72	8.09	4.69	5.55	19.97	17.25	10.14	3.93	12.06	5.06	16.47	19.62	5.13	14.88	8.62
38	ER6c	ExonRegion	0	14.66	16.34	6.78	31.83	8.08	10.02	15.32	10.19	15.75	8.44	4.66	3.25	5.70	9.16	2.18	2.39	4.48	3.13	9.61	12.42	3.42	6.96	7.24
39	E6_Dc	KnownBoundary	0	16.67	9.47	4.97	35.13	13.16	18.34	22.43	18.81	16.87	17.54	4.32	0.00	6.82	7.06	0.00	3.42	0.00	2.24	9.32	14.19	0.00	5.20	10.50
40	ER6d	ExonRegion	0	8.35	5.59	3.68	24.97	11.61	14.83	20.73	11.98	9.35	13.01	2.83	12.14	9.88	7.22	3.73	2.23	11.55	3.60	7.79	9.50	0.00	10.45	6.76
41	E6_Dd	NovelBoundary	1	16.52	9.21	12.30	10.95	12.05	0.00	18.46	12.77	3.36	14.32	0.00	19.06	38.96	6.95	4.45	3.85	4.77	1.70	8.19	3.13	0.00	13.53	3.84
42	E6d_E7a	KnownJunction	0	0.00	2.96	3.61	16.85	11.29	18.06	6.32	3.12	0.00	8.30	0.00	0.00	5.84	0.00	0.00	0.00	4.21	4.02	11.67	5.94	0.00	2.39	0.00
43	I6_SR1	SilentIntronRegion	0	8.75	10.56	3.55	5.76	19.07	2.15	10.48	8.88	5.58	6.66	0.00	12.06	18.76	2.46	5.49	3.87	8.20	2.10	0.00	4.83	1.37	11.06	8.98
44	ER7a	ExonRegion	0	24.45	44.10	53.01	70.60	29.14	79.52	55.61	66.90	72.16	93.94	96.68	28.99	58.63	137.58	69.02	164.25	118.52	129.45	100.10	65.54	155.90	157.75	142.92
45	E7a_E8a	KnownJunction	1	18.89	59.27	68.27	77.21	41.94	99.89	50.17	63.62	79.17	106.91	98.60	12.60	21.75	152.92	59.46	130.73	127.26	121.25	74.07	74.72	173.90	147.82	159.37
46	ER8a	ExonRegion	0	29.94	69.09	56.32	81.17	18.70	95.31	52.64	78.05	78.82	90.90	92.52	40.11	29.95	145.37	71.69	130.52	107.22	140.07	91.68	67.60	155.91	143.59	155.61
47	E8_Da	KnownBoundary	0	34.08	47.43	32.82	59.00	15.62	87.00	55.38	70.85	59.90	82.52	69.23	48.17	25.32	67.63	23.12	115.35	95.37	109.52	49.13	45.96	104.84	89.40	86.13
48	E8_Db	KnownBoundary	0	31.12	71.63	50.35	59.20	36.33	33.50	51.45	65.84	50.29	59.36	96.08	46.82	49.51	63.75	37.09	70.24	94.06	84.52	60.05	41.99	101.19	92.34	93.73
49	E8b_E8b	KnownJunction	0	9.11	32.63	32.23	43.32	0.00	26.06	22.04	49.95	31.54	52.97	32.32	0.00	6.66	21.31	4.82	35.63	42.54	51.90	7.62	29.02	63.51	48.31	59.75
50	ER8b	ExonRegion	0	42.52	84.30	66.84	92.68	33.33	94.52	66.20	104.18	89.04	117.61	126.34	56.28	50.74	128.60	81.50	137.26	150.64	168.48	76.16	63.25	168.88	134.48	127.61
51	ER8c	ExonRegion	0	66.02	112.98	76.59	121.49	103.43	140.50	102.94	124.45	108.41	135.97	167.75	137.32	127.59	189.74	114.06	195.32	180.63	144.43	144.66	78.89	184.53	233.74	194.31
52	E8_Ab	KnownBoundary	1	80.46	174.64	98.67	166.95	147.20	157.81	107.67	94.06	119.73	123.86	129.30	163.10	199.01	182.30	90.86	210.29	127.07	101.98	149.56	81.05	123.43	153.39	191.30
53	ER8d	ExonRegion	0	109.12	146.40	103.20	164.81	122.32	147.40	114.13	110.06	119.86	128.73	153.96	134.85	119.89	161.26	134.75	174.31	157.53	133.24	116.58	78.80	193.12	184.94	184.85
54	E8_Ac	KnownBoundary	0	187.89	206.54	166.58	258.58	93.63	161.67	122.37	134.52	125.92	154.78	216.11	98.88	90.42	196.07	211.51	255.06	156.99	170.66	202.64	141.77	244.64	279.71	190.79
55	ER8e	ExonRegion	0	161.78	199.08	147.08	197.86	115.61	125.69	124.04	140.45	159.04	140.63	197.25	89.92	98.49	199.68	174.15	221.00	156.67	146.21	139.75	110.86	225.46	207.39	208.35
56	E8_Dc	KnownBoundary	0	240.78	213.78	98.90	109.54	181.49	157.24	178.20	113.24	144.36	98.05	164.78	143.15	185.86	232.74	197.54	219.77	116.50	91.65	151.72	103.99	220.17	179.41	241.75
57	ER8f	ExonRegion	0	164.38	143.41	110.55	157.47	132.89	126.62	96.63	122.06	96.04	102.29	143.52	99.61	106.99	140.80	181.76	143.73	103.47	86.95	103.65	56.61	147.93	163.03	141.31
58	ER8g	ExonRegion	0	2.12	6.10	1.23	0.00	2.68	0.00	5.30	5.19	7.41	4.59	1.93	0.00	9.38	0.00	5.80	0.00	0.00	1.85	0.00	2.13	6.61	2.08	2.94
59	ER8h	ExonRegion	0	0.42	1.63	0.49	0.00	1.07	0.00	2.91	1.73	2.96	1.15	0.39	0.00	0.00	0.00	2.32	0.00	0.00	0.37	0.00	0.43	0.88	1.25	0.00