Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RAC2 Gene 0 289.52 0.74 41.71 15.05 69.74 16.92 22.85 62.05 40.52 14.94 921.55 206.25 358.17 974.24 905.35 617.94 660.43 0.50 14.31 1.84 14.24 17.17 31.82 2 406508 Transcript 0 0.00 0.00 2.88 0.00 0.00 0.00 0.00 0.65 0.39 0.00 3.45 0.00 3.41 4.11 16.62 5.26 2.10 0.00 0.00 0.00 0.00 0.00 0.00 3 441619 Transcript 1 13.34 0.00 22.80 0.00 7.81 0.00 2.21 8.01 1.74 1.67 54.75 0.00 0.00 28.84 62.43 3.42 31.88 0.00 0.00 0.00 3.15 0.00 4.35 4 405484 Transcript 1 19.75 0.00 10.11 0.00 8.03 0.00 5.30 6.91 13.59 2.10 82.31 4.33 4.69 83.91 195.83 138.20 61.89 0.00 0.00 0.00 2.20 0.00 8.81 5 469532 Transcript 0 77.03 0.00 6.55 1.18 9.28 1.52 5.43 10.57 7.13 1.77 76.99 9.40 17.22 63.97 75.01 69.84 62.97 0.00 0.97 0.00 1.13 1.46 4.15 6 249071 Transcript 0 1.92 0.00 1.11 0.00 7.78 0.00 0.00 3.14 0.00 0.00 7.03 3.54 11.94 4.13 0.00 2.43 0.00 0.00 0.00 0.00 0.00 0.00 2.94 7 401529 Transcript 0 9.69 0.00 1.67 0.29 2.45 0.52 1.40 3.81 2.46 1.09 15.40 3.01 6.12 17.21 23.62 13.82 16.30 0.00 0.90 0.00 0.62 0.00 1.03 8 458421 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 417990 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 481215 Transcript 0 58.02 0.61 6.42 1.11 13.10 5.13 2.03 10.28 5.76 1.20 52.07 13.75 56.20 87.65 78.64 46.04 26.87 0.00 0.53 0.04 1.45 0.40 1.73 11 ER1a ExonRegion 0 0.00 0.00 2.14 0.00 0.00 0.00 0.00 1.30 0.77 0.00 0.00 0.00 0.00 1.22 0.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 0.47 0.00 2.72 0.00 0.00 0.00 0.29 3.46 1.24 0.00 0.43 0.00 0.00 1.99 2.90 0.00 0.00 0.00 0.71 0.00 0.00 0.00 0.00 13 ER1c ExonRegion 0 2.92 0.73 16.65 0.73 3.15 0.00 1.69 11.59 8.86 2.24 14.03 0.52 1.35 14.57 21.68 13.04 11.02 0.00 1.10 0.00 1.33 0.00 3.56 14 E1_Da KnownBoundary 0 0.00 0.00 8.87 0.00 0.00 0.00 0.00 0.00 11.49 1.67 5.21 0.00 0.00 7.77 13.35 16.83 3.93 0.00 0.00 0.00 0.00 0.00 0.00 15 E1a_E1g KnownJunction 0 13.34 0.00 22.80 0.00 7.81 0.00 2.21 8.01 1.74 1.67 54.75 0.00 0.00 28.84 62.43 3.42 31.88 0.00 0.00 0.00 3.15 0.00 4.35 16 E1a_E2a KnownJunction 0 0.00 0.00 3.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.90 0.00 6.82 7.00 32.51 10.51 4.21 0.00 0.00 0.00 0.00 0.00 0.00 17 E1_Ad KnownBoundary 0 11.26 0.00 1.83 0.00 4.33 0.00 4.50 0.00 0.00 1.53 37.43 0.00 0.00 2.94 12.61 91.00 14.31 0.00 0.00 0.00 0.00 0.00 12.89 18 E1_Ae KnownBoundary 0 10.59 0.00 0.00 0.00 0.00 0.00 0.00 7.35 3.59 1.61 21.48 0.00 0.00 36.91 33.13 38.20 18.61 0.00 0.00 0.00 0.00 0.00 0.00 19 ER1d ExonRegion 1 19.75 0.00 10.11 0.00 8.03 0.00 5.30 6.91 13.59 2.10 82.31 4.33 4.69 83.91 195.83 138.20 61.89 0.00 0.00 0.00 2.20 0.00 8.81 20 E1_Af KnownBoundary 1 440.89 0.00 37.64 3.03 171.48 30.78 61.92 18.65 14.41 5.40 1399.88 269.79 276.12 928.84 2395.70 1413.90 1546.42 0.00 114.45 0.00 39.91 13.72 194.80 21 ER1e ExonRegion 1 26.72 0.00 11.79 0.00 8.36 0.23 5.30 6.91 13.59 2.29 94.47 4.33 5.28 103.94 205.99 155.29 73.44 0.00 0.00 0.00 2.20 0.00 9.18 22 ER1f ExonRegion 1 210.69 0.00 32.64 2.11 84.65 16.00 31.17 18.78 20.44 7.14 866.38 33.85 30.70 536.33 1199.27 867.46 885.09 1.18 60.52 0.68 24.14 8.24 115.46 23 ER1g ExonRegion 1 576.34 0.00 51.07 8.98 220.75 70.36 69.39 26.00 38.75 15.03 2007.53 60.61 98.18 1440.24 2108.45 1532.91 1999.48 1.85 89.05 5.55 35.50 28.58 159.66 24 E1_Ag KnownBoundary 1 649.08 0.00 49.85 14.82 224.02 104.03 59.31 17.13 47.57 22.38 1391.14 114.79 233.10 1152.57 1398.11 1030.41 1311.64 1.99 27.48 8.18 5.62 24.74 75.80 25 ER1h ExonRegion 1 920.24 0.00 56.72 18.57 215.84 84.24 58.97 57.00 69.84 19.64 1977.92 71.71 125.85 1217.07 1568.07 1466.99 1309.22 0.62 17.59 5.67 15.15 23.44 50.78 26 E1_Ah KnownBoundary 0 1292.82 0.00 39.06 24.57 195.67 69.39 72.16 71.80 81.02 22.30 1675.79 178.11 352.25 1018.02 1370.79 1515.76 840.30 0.00 4.80 0.00 11.12 24.55 24.76 27 E1_Db NovelBoundary 0 209.74 0.00 23.18 4.49 41.60 5.05 16.47 27.40 16.61 5.83 463.33 362.37 436.34 229.62 392.61 308.81 342.03 0.00 0.00 0.00 7.85 5.33 10.33 28 E1b_E2a KnownJunction 1 0.00 0.00 0.00 3.63 0.00 0.00 0.00 2.55 0.00 2.26 34.54 0.00 6.17 4.89 0.00 0.00 53.20 0.00 0.00 0.00 0.00 0.00 0.00 29 ER1i ExonRegion 0 764.77 0.00 45.75 21.81 110.15 44.01 50.53 79.80 73.70 22.36 1450.96 285.74 341.59 921.69 1206.92 1139.31 790.01 0.00 3.19 0.00 13.22 19.79 24.96 30 ER1j ExonRegion 0 693.24 0.00 45.62 22.02 94.06 43.31 45.93 86.42 77.05 25.94 1489.22 399.64 472.97 671.89 803.42 1044.82 867.12 0.00 7.60 0.00 18.48 21.80 25.30 31 E1c_E2a KnownJunction 1 308.87 0.00 50.62 19.28 69.69 39.41 32.68 81.37 68.52 31.00 2048.57 564.48 1238.39 693.69 894.62 731.43 1831.13 0.00 21.27 5.82 52.82 14.57 55.57 32 ER1k ExonRegion 0 288.35 0.00 50.47 19.15 56.83 27.16 28.37 79.59 73.46 28.34 1576.14 557.68 1130.97 580.20 766.07 588.62 1252.77 0.00 10.31 2.94 37.99 15.28 35.94 33 ER2a ExonRegion 0 139.60 0.00 88.41 28.36 52.47 13.91 19.53 105.27 84.35 36.40 3311.83 618.81 1674.08 1883.28 2092.37 1275.70 2474.25 3.75 76.32 7.09 50.41 29.89 123.75 34 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E2a_E4a KnownJunction 1 191.52 0.00 115.87 34.89 67.66 4.37 21.15 128.15 94.18 43.27 3514.21 358.32 516.85 2449.54 3146.56 1926.25 2190.93 7.25 38.40 3.26 29.65 58.48 138.54 36 ER3a ExonRegion 0 19.38 0.00 3.34 0.57 4.91 1.03 2.80 7.62 4.93 2.17 30.80 6.03 12.24 34.41 47.25 27.64 32.61 0.00 1.80 0.00 1.24 0.00 2.07 37 E4_Aa NovelBoundary 0 55.12 0.00 14.87 0.00 15.70 0.00 15.15 2.42 11.57 2.61 14.16 38.41 6.82 36.49 72.93 35.63 17.20 0.00 0.00 0.00 0.00 0.00 4.35 38 ER4a ExonRegion 0 193.41 0.00 95.21 33.60 114.17 27.90 26.31 167.43 119.35 41.05 2335.68 382.83 610.26 2348.97 2763.12 1737.18 1613.63 1.50 28.24 4.06 31.88 51.35 91.68 39 E4_Da KnownBoundary 0 16.60 0.00 12.86 3.66 0.00 2.84 9.01 17.74 8.39 5.13 48.12 18.76 14.45 47.68 120.53 100.06 45.44 0.00 4.71 0.00 0.00 3.12 0.00 40 E4a_E5a KnownJunction 0 171.66 0.00 135.24 43.42 322.24 54.68 60.33 193.91 139.67 42.98 2556.49 371.37 538.44 2608.70 2146.12 1780.05 2075.17 1.87 30.21 9.20 60.11 55.42 98.68 41 ER4b ExonRegion 0 77.03 0.00 6.55 1.18 9.28 1.52 5.43 10.57 7.13 1.77 76.99 9.40 17.22 63.97 75.01 69.84 62.97 0.00 0.97 0.00 1.13 1.46 4.15 42 E4_Db NovelBoundary 0 59.05 0.00 14.78 4.03 8.32 8.46 4.06 26.53 7.99 2.31 42.70 11.25 13.96 79.05 52.17 32.38 43.01 0.00 0.00 0.00 2.66 0.00 3.41 43 E5_Aa NovelBoundary 0 101.50 0.00 15.76 0.00 47.37 2.44 4.37 11.91 12.70 4.35 63.07 13.50 24.84 117.84 66.14 117.75 89.85 0.00 0.00 0.00 0.00 0.00 3.59 44 ER5a ExonRegion 0 280.42 0.00 117.48 36.15 228.08 82.03 69.10 153.26 116.38 39.69 2786.38 503.73 664.12 2923.34 2375.53 1394.07 2040.32 1.82 17.04 3.38 28.26 42.43 73.14 45 E5a_E6b KnownJunction 0 494.31 0.00 120.93 45.02 237.18 88.93 70.75 168.32 122.51 43.76 2801.87 583.99 776.90 3155.17 2505.72 1413.56 1827.02 4.64 22.78 3.26 31.38 38.88 71.53 46 ER6a ExonRegion 0 58.02 0.61 6.42 1.11 13.10 5.13 2.03 10.28 5.76 1.20 52.07 13.75 56.20 87.65 78.64 46.04 26.87 0.00 0.53 0.04 1.45 0.40 1.73 47 E6_Ab KnownBoundary 0 86.46 3.22 7.39 1.70 8.32 2.90 4.02 10.84 2.75 0.00 14.58 20.26 12.50 41.50 28.18 52.21 13.09 0.00 4.05 0.00 2.41 0.00 0.00 48 ER6b ExonRegion 0 1059.03 2.83 125.47 53.54 192.08 41.47 65.61 207.54 130.60 45.68 3229.79 752.10 1087.44 3545.41 3061.95 1883.47 2149.82 1.31 38.50 5.38 50.51 53.08 80.86 49 E6a_E7a KnownJunction 0 1561.68 0.00 174.65 61.23 248.64 27.03 63.37 284.60 169.93 54.37 3298.15 1089.20 1670.18 4247.71 3589.35 2160.54 2396.72 2.57 53.08 10.99 46.39 66.87 93.64 50 ER7a ExonRegion 0 1224.09 0.24 159.90 64.14 229.54 30.46 69.18 259.91 135.50 53.07 3461.97 885.59 1295.92 4270.73 3263.11 2100.07 2494.96 1.63 49.84 7.34 44.85 64.63 86.43 51 E7_Da KnownBoundary 0 1362.17 0.00 169.60 68.02 290.83 41.00 82.19 283.37 118.40 48.62 3735.26 860.08 1053.99 4387.92 3524.33 2101.50 2677.04 0.00 50.92 0.00 50.35 55.97 68.63 52 ER7b ExonRegion 0 849.91 2.44 144.26 58.89 248.71 56.32 59.46 211.52 118.29 45.09 2875.89 761.99 1087.85 3632.06 2913.58 1738.84 2046.47 2.22 29.15 8.72 54.46 47.01 58.18 53 E7c_E8a KnownJunction 0 591.36 0.00 172.64 81.04 322.92 70.58 84.22 268.87 155.93 57.08 2737.01 712.43 1240.50 3975.65 3468.83 2373.65 2048.52 2.45 55.63 5.37 33.85 79.48 128.04 54 ER7c ExonRegion 0 429.65 0.00 156.23 70.19 276.94 54.10 71.49 248.03 144.51 63.08 2510.84 794.46 1271.00 3912.50 3185.58 2187.48 1931.02 1.85 50.97 8.51 33.06 61.46 116.00 55 ER8a ExonRegion 0 710.23 2.80 161.98 68.24 356.81 54.99 87.24 269.64 137.36 64.44 2990.61 1011.63 1955.05 3802.90 3263.16 2639.17 2078.05 1.20 57.21 7.39 45.83 90.32 112.98 56 E8_Da KnownBoundary 0 662.93 0.00 152.92 50.81 238.54 45.31 44.87 244.80 133.13 48.84 2254.99 635.76 890.36 2297.26 1911.87 1965.38 1528.56 0.00 47.06 10.87 39.48 59.46 64.02 57 ER8b ExonRegion 0 302.12 2.59 88.98 31.31 87.41 20.59 35.05 115.31 71.86 31.34 1321.19 300.97 526.02 1857.21 1316.63 905.04 935.83 0.00 12.24 2.39 27.93 32.33 41.91 58 E8_Db KnownBoundary 0 1232.74 0.00 128.56 56.37 221.82 30.89 63.82 121.95 85.50 28.12 1937.39 477.76 755.63 2176.95 1732.37 1623.59 1332.40 0.00 17.69 5.05 25.45 68.70 93.90 59 ER8c ExonRegion 0 268.59 0.92 6.25 2.59 22.06 6.21 13.34 9.92 6.79 1.69 47.70 53.46 134.51 141.46 148.83 156.69 32.15 0.00 2.99 0.16 0.46 4.51 7.04 60 ER8d ExonRegion 0 1.92 0.00 1.11 0.00 7.78 0.00 0.00 3.14 0.00 0.00 7.03 3.54 11.94 4.13 0.00 2.43 0.00 0.00 0.00 0.00 0.00 0.00 2.94