Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TST Gene 0 16.74 3.14 27.43 9.14 7.55 1.76 4.90 12.49 4.41 13.56 46.69 6.99 6.30 79.06 87.14 55.17 56.00 20.55 31.05 17.73 48.35 27.63 17.21 2 438203 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 249042 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 403892 Transcript 0 1.74 0.72 4.42 2.42 2.44 0.14 1.29 0.21 0.44 2.95 1.86 1.04 0.61 4.78 3.76 4.26 3.63 6.26 8.34 3.47 7.98 7.14 5.19 5 413912 Transcript 0 11.26 2.50 38.08 8.86 15.87 1.99 3.36 7.72 8.80 21.44 37.33 5.55 5.84 61.33 67.50 41.95 70.59 25.29 38.97 19.11 32.37 22.96 22.62 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 1.37 2.68 0.00 0.00 0.00 4.94 7.52 0.00 0.00 0.00 0.00 4.94 0.00 0.00 11 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.66 0.00 0.00 1.15 1.93 0.00 0.00 0.00 1.45 2.53 0.00 0.00 0.00 0.00 2.31 0.00 0.00 12 ER2c ExonRegion 1 20.89 5.41 9.26 0.90 7.34 0.00 3.52 4.82 3.55 6.08 46.14 0.00 0.00 46.48 30.99 91.25 42.28 14.04 20.74 10.82 28.32 23.18 30.37 13 E2_Da KnownBoundary 0 11.34 9.34 0.00 0.00 11.71 0.00 4.33 0.00 0.00 2.79 0.00 0.00 0.00 4.71 0.00 4.27 0.00 4.60 8.66 0.00 6.24 3.12 4.35 14 E2a_E2d KnownJunction 1 67.86 9.80 22.77 3.90 8.66 0.00 4.37 12.12 7.06 15.12 112.66 34.36 5.84 110.60 90.61 243.53 108.84 37.27 52.14 28.83 48.25 52.05 68.72 15 ER2d ExonRegion 0 1.74 0.72 4.42 2.42 2.44 0.14 1.29 0.21 0.44 2.95 1.86 1.04 0.61 4.78 3.76 4.26 3.63 6.26 8.34 3.47 7.98 7.14 5.19 16 E2_Ad KnownBoundary 0 0.00 0.00 5.74 3.36 3.23 0.00 2.21 0.00 0.00 3.22 2.68 6.30 0.00 7.24 4.45 3.33 4.77 19.52 22.68 8.88 6.12 5.51 7.94 17 ER2e ExonRegion 0 19.26 3.35 31.00 7.71 8.29 2.92 5.73 16.03 6.41 16.87 64.42 11.84 4.52 107.64 103.30 90.68 84.04 30.09 33.83 23.39 68.69 35.96 27.14 18 E2_Db KnownBoundary 0 48.08 12.56 37.20 14.58 11.54 5.51 12.23 28.22 7.78 23.64 91.23 0.00 0.00 184.41 198.53 87.84 95.84 61.14 57.41 52.67 131.22 51.62 29.28 19 ER2f ExonRegion 0 44.53 7.68 66.41 23.76 17.94 4.19 11.16 30.07 8.35 30.14 94.61 12.50 11.36 201.54 217.69 115.90 115.29 47.20 57.85 41.29 95.96 56.86 25.36 20 E2_Dc NovelBoundary 0 13.48 3.16 0.00 1.27 0.00 0.00 0.00 0.00 0.00 1.67 0.00 12.30 6.82 7.24 0.00 16.15 0.00 2.40 4.33 6.33 8.53 5.20 7.94 21 E2c_E3a KnownJunction 0 47.05 0.00 75.54 26.70 11.63 10.68 20.45 30.23 4.57 26.89 103.13 12.45 6.33 151.69 224.24 88.35 128.28 48.17 59.86 32.47 93.10 59.70 39.01 22 I2_SR3 SilentIntronRegion 0 1.59 1.07 2.03 2.17 0.00 0.00 0.78 0.80 0.97 0.88 3.09 5.83 0.83 1.63 5.76 2.22 6.35 1.42 13.86 2.19 5.30 3.71 4.37 23 I2_AR4 ActiveIntronRegion 0 30.19 3.12 2.92 4.09 6.02 0.00 2.33 0.97 0.00 3.29 2.83 2.73 0.00 7.10 10.26 18.54 1.96 5.37 7.05 7.52 7.50 6.95 7.62 24 ER3a ExonRegion 0 30.83 10.00 82.10 24.49 22.01 5.53 16.23 23.19 11.69 36.65 105.25 11.10 12.18 189.47 253.06 117.02 150.46 52.18 79.53 51.72 111.78 60.02 42.68 25 E3_Da KnownBoundary 0 37.49 12.83 95.41 28.13 33.11 5.39 14.71 27.52 18.58 35.43 120.50 12.15 15.10 199.48 237.47 132.10 191.68 51.90 94.40 66.67 133.19 49.05 55.83 26 E3a_E3b KnownJunction 0 11.26 2.50 38.08 8.86 15.87 1.99 3.36 7.72 8.80 21.44 37.33 5.55 5.84 61.33 67.50 41.95 70.59 25.29 38.97 19.11 32.37 22.96 22.62 27 ER3b ExonRegion 0 23.59 5.30 61.12 21.54 14.35 3.54 7.71 29.06 10.13 25.89 100.95 11.04 18.38 157.11 203.52 87.47 106.50 30.89 66.59 36.36 102.84 48.04 27.97 28 E3_Ab KnownBoundary 0 70.83 3.22 71.29 25.84 14.52 11.36 7.38 28.63 11.72 26.30 96.60 6.30 19.97 106.83 204.71 130.99 95.65 49.37 82.45 33.11 88.34 47.09 43.62 29 ER3c ExonRegion 0 26.58 3.72 40.15 16.60 8.79 1.26 6.45 31.65 8.15 21.87 104.33 5.74 18.76 133.45 164.35 100.94 107.17 26.92 68.13 24.15 96.91 67.84 30.21 30 E3_Db KnownBoundary 0 24.45 6.58 43.32 5.36 3.40 0.00 8.26 25.51 8.54 31.03 119.29 12.45 20.45 128.50 113.48 80.41 127.07 15.71 79.72 25.31 96.50 104.65 16.39 31 ER3d ExonRegion 0 28.21 3.05 25.60 7.90 5.67 1.11 5.37 12.10 3.85 13.84 53.17 14.17 13.29 70.33 77.42 48.49 57.29 12.32 36.27 11.60 40.90 22.63 14.40