Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C22orf24 Gene 0 1.35 4.02 7.27 5.20 5.37 5.39 7.97 7.27 9.85 7.21 2.02 0.73 0.47 2.33 1.89 1.90 3.07 12.36 6.85 14.29 1.60 0.73 0.51 2 486651 Transcript 0 4.20 3.99 10.09 3.81 1.74 5.78 6.62 13.50 40.93 10.04 5.40 3.23 1.17 7.25 2.58 5.63 7.89 15.09 10.50 33.10 3.27 3.66 1.86 3 248984 Transcript 0 0.49 1.81 2.90 3.24 2.29 1.94 2.53 2.10 3.57 3.33 0.44 0.00 0.13 1.95 2.94 0.41 0.82 5.89 3.24 5.10 0.28 0.00 0.00 4 484682 Transcript 0 0.32 0.31 0.83 1.19 1.53 0.42 2.83 0.79 1.47 0.31 0.01 0.00 0.70 0.61 0.03 0.00 1.00 2.57 0.75 0.03 0.66 0.00 0.00 5 415907 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 4.20 3.99 10.09 3.81 1.74 5.78 6.62 13.50 40.93 10.04 5.40 3.23 1.17 7.25 2.58 5.63 7.89 15.09 10.50 33.10 3.27 3.66 1.86 7 E1_Ab KnownBoundary 0 3.78 21.90 18.18 3.43 3.90 19.82 8.26 20.82 51.04 16.92 12.11 0.00 0.00 5.00 0.00 3.76 12.34 25.08 44.61 59.70 5.25 6.25 0.00 8 ER1b ExonRegion 0 2.24 7.53 18.46 6.90 23.01 18.02 25.03 24.92 36.35 22.29 12.01 6.22 0.00 5.48 6.82 10.01 9.11 35.77 23.71 56.46 2.94 4.70 4.99 9 E1_Da NovelBoundary 0 0.00 0.00 11.53 0.00 4.24 4.77 3.71 9.45 21.18 9.54 4.69 0.00 0.00 4.89 0.00 3.93 0.00 8.04 12.24 12.53 0.00 0.00 0.00 10 E1a_E2b KnownJunction 0 0.00 0.00 5.59 0.00 0.00 0.00 0.00 2.38 0.00 2.42 2.68 0.00 0.00 2.18 5.32 0.00 4.11 0.00 0.00 9.78 0.00 0.00 0.00 11 ER2a ExonRegion 0 0.32 0.31 0.83 1.19 1.53 0.42 2.83 0.79 1.47 0.31 0.01 0.00 0.70 0.61 0.03 0.00 1.00 2.57 0.75 0.03 0.66 0.00 0.00 12 E2_Ab KnownBoundary 0 0.00 0.00 0.00 1.30 3.23 4.88 1.85 0.00 1.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.73 4.71 0.00 0.00 0.00 0.00 13 ER2b ExonRegion 0 0.00 0.00 3.85 1.17 7.54 2.84 2.08 4.55 4.66 8.08 1.18 0.00 0.00 1.96 2.37 1.52 2.49 3.54 5.72 14.50 0.00 0.00 0.00 14 E2_Ac KnownBoundary 0 0.00 0.00 6.86 1.93 10.70 2.10 3.89 8.58 4.75 13.27 0.00 0.00 0.00 5.12 0.00 4.36 0.00 4.68 13.46 35.47 0.00 0.00 0.00 15 ER2c ExonRegion 0 0.00 2.11 9.44 7.49 4.52 0.00 7.91 11.20 5.13 12.01 1.38 0.00 0.00 1.84 4.97 1.00 2.19 17.93 12.12 28.96 2.32 0.00 0.00 16 E2_Da KnownBoundary 0 0.00 2.89 3.08 3.13 0.00 0.00 4.50 2.14 4.80 1.21 0.00 0.00 0.00 0.00 4.45 0.00 0.00 6.18 4.42 3.20 0.00 0.00 0.00 17 E2a_E3a KnownJunction 0 0.00 5.13 6.06 5.19 0.00 0.00 6.01 4.44 1.59 8.22 2.16 0.00 0.00 2.12 5.19 0.00 0.00 18.28 8.66 25.89 3.15 0.00 0.00 18 ER2d ExonRegion 0 0.00 1.06 2.69 4.37 1.87 0.00 1.11 1.23 4.40 0.35 0.00 0.00 0.00 1.71 1.51 0.00 0.00 1.90 1.35 5.16 0.00 0.00 0.00 19 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.53 1.05 0.00 0.00 0.00 2.77 6.18 0.00 0.00 0.00 4.33 2.56 0.00 0.00 0.00 20 ER3a ExonRegion 0 0.04 4.78 9.71 7.36 7.90 13.27 17.82 8.05 7.08 8.80 1.86 0.00 0.00 1.72 1.51 0.32 4.95 11.32 8.53 15.12 3.61 0.00 0.00 21 E3_Da KnownBoundary 0 0.00 9.67 15.49 12.12 11.46 32.65 56.53 12.12 9.84 14.77 0.00 0.00 0.00 2.47 4.45 3.59 0.00 11.81 25.22 18.09 2.35 0.00 0.00 22 ER3b ExonRegion 0 2.29 8.17 11.37 8.90 6.62 3.79 10.86 8.91 5.75 4.97 0.81 0.00 0.86 2.72 2.37 1.18 2.20 9.13 11.99 14.07 2.64 0.46 0.00 23 E3_Db KnownBoundary 0 0.00 17.50 11.29 15.58 4.33 11.07 12.19 10.39 4.22 2.66 0.00 0.00 0.00 2.47 0.00 0.00 0.00 8.50 0.00 5.62 2.59 0.00 0.00 24 ER3c ExonRegion 0 0.11 6.73 9.80 9.47 1.65 10.65 6.45 7.62 1.77 4.82 0.00 0.00 0.00 1.81 2.34 1.45 0.89 12.11 2.29 10.58 1.16 0.00 0.00 25 E3_Dc KnownBoundary 0 0.00 2.57 5.14 4.03 0.00 13.12 8.97 5.71 1.74 8.70 0.00 0.00 0.00 2.47 5.19 4.10 8.88 16.83 0.00 7.67 0.00 0.00 0.00 26 ER3d ExonRegion 0 1.46 4.36 6.02 5.34 5.01 5.83 6.47 5.08 4.77 8.60 1.33 0.00 0.38 1.37 1.12 1.24 2.46 15.78 4.04 7.59 0.85 0.00 0.00 27 IG7_AR3 ActiveIntergenicRegion 0 2.21 4.91 13.34 5.43 8.38 2.27 7.25 9.73 4.32 6.02 0.00 0.00 0.50 0.09 0.27 0.00 0.43 5.81 10.39 9.16 0.00 0.00 0.00 28 IG7_AR2 ActiveIntergenicRegion 0 5.04 8.24 6.96 16.46 10.20 0.87 6.94 6.75 6.14 7.74 0.00 0.00 0.92 0.00 2.52 7.08 2.36 1.75 0.76 5.07 1.05 0.99 2.80 29 IG7_AR1 ActiveIntergenicRegion 0 2.12 5.08 8.58 1.36 10.70 3.67 5.30 3.46 4.94 6.88 0.00 0.00 4.69 0.00 5.32 11.89 13.20 1.85 6.37 4.26 2.20 0.00 5.87 30 IG7_SR1 SilentIntergenicRegion 0 1.45 6.48 10.50 7.12 12.66 1.51 6.86 11.90 8.45 2.89 0.63 1.28 0.75 0.92 6.20 8.23 4.53 9.76 13.34 8.50 2.27 0.68 2.00