Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RFPL1 Gene 0 0.87 2.98 1.56 1.11 1.37 1.31 2.80 2.02 2.70 1.75 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.56 2.28 0.15 0.15 0.14 0.00 2 354373 Transcript 0 0.47 1.63 0.85 0.60 0.75 0.72 1.53 1.14 1.47 0.95 0.00 0.00 0.00 0.00 0.08 0.00 0.00 0.31 1.24 0.08 0.08 0.08 0.00 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 E1_Da NovelBoundary 0 0.00 44.66 12.83 35.76 34.04 59.57 30.07 61.08 76.16 26.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.82 22.49 2.94 6.30 0.00 0.00 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 3.78 27.69 44.76 35.46 11.54 21.75 28.79 33.76 69.10 12.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 38.21 2.49 5.62 0.00 3.33 7 ER2a ExonRegion 0 1.42 4.88 2.55 1.81 2.24 2.15 4.58 3.11 4.41 2.86 0.00 0.00 0.00 0.00 0.23 0.00 0.00 0.92 3.73 0.24 0.25 0.23 0.00 8 IG39 Intergenic 0 1.63 11.38 22.49 5.93 5.65 5.93 14.56 11.35 8.69 7.96 0.01 0.05 0.02 0.01 0.04 0.01 0.03 8.96 17.33 2.82 0.77 0.09 0.68 9 IG39_SR1 SilentIntergenicRegion 0 1.99 12.74 20.03 5.55 6.08 2.95 9.36 9.57 6.91 6.02 0.00 0.14 0.00 0.00 0.08 0.00 0.00 4.35 16.72 1.50 0.35 0.08 0.35 10 IG39_AR1 ActiveIntergenicRegion 0 1.36 13.77 30.37 8.33 3.73 5.89 13.01 14.96 9.13 9.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.57 12.66 2.05 0.94 0.00 0.00 11 IG39_SR2 SilentIntergenicRegion 0 1.60 11.09 22.43 5.87 5.69 6.34 15.34 11.42 8.91 8.12 0.01 0.04 0.02 0.02 0.04 0.02 0.03 9.60 17.65 3.04 0.82 0.10 0.76