Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NCF4 Gene 0 144.11 1.24 5.98 10.59 20.85 11.79 8.32 22.38 20.90 8.22 166.37 46.60 56.50 327.98 189.88 176.11 140.91 0.05 0.00 0.12 0.00 0.78 1.87 2 447071 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.22 0.00 0.00 0.00 0.00 0.00 21.25 0.00 0.00 4.21 0.00 0.00 0.00 0.00 0.00 0.00 3 439078 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 336951 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 397147 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 248899 Transcript 1 225.45 0.00 6.27 9.96 34.13 7.67 7.68 34.34 19.44 5.99 254.06 32.56 79.22 321.80 204.59 245.32 192.24 0.00 0.00 0.00 0.00 3.12 3.67 7 415063 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 439006 Transcript 0 43.39 0.00 0.00 0.00 2.68 0.00 1.32 0.00 0.00 0.00 4.83 12.99 4.69 15.43 23.21 7.43 4.95 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1a ExonRegion 1 149.93 0.00 2.35 6.60 25.33 12.12 5.12 13.25 8.96 3.38 141.97 7.00 12.35 177.01 121.64 160.48 127.42 0.00 0.00 0.00 0.00 0.49 1.43 10 E1a_E2a KnownJunction 1 50.45 0.00 5.62 17.71 0.00 2.16 2.21 23.33 20.86 6.21 193.21 19.66 6.82 342.28 301.75 182.52 184.48 0.00 0.00 0.00 0.00 0.00 3.24 11 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.22 0.00 0.00 0.00 0.00 0.00 21.25 0.00 0.00 4.21 0.00 0.00 0.00 0.00 0.00 0.00 12 E2_Aa NovelBoundary 1 9.93 0.00 0.00 1.80 7.64 0.00 1.94 4.03 2.60 0.00 2.37 12.45 26.46 31.55 5.19 19.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 45.02 0.00 5.65 11.11 10.48 2.14 3.54 27.86 28.04 5.02 176.80 51.60 38.18 430.93 302.14 333.09 178.99 0.00 0.00 0.00 0.00 1.25 3.42 14 E2a_E3a KnownJunction 0 85.72 0.00 5.80 12.02 25.30 10.90 1.77 28.96 24.86 7.76 180.57 62.57 40.74 354.05 195.07 172.78 149.88 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 0 123.65 0.00 8.10 9.58 17.72 20.85 10.18 21.66 21.18 13.95 186.34 52.66 63.41 384.72 206.40 176.61 149.68 0.00 0.00 0.00 0.00 0.31 1.62 16 E3a_E4a KnownJunction 0 356.51 0.00 11.12 20.04 11.29 12.78 8.39 18.73 26.88 17.81 231.85 31.36 52.43 433.58 184.19 243.10 164.84 0.00 0.00 0.00 0.00 3.12 4.10 17 ER4a ExonRegion 0 470.64 3.15 8.13 16.47 10.82 16.74 9.79 25.61 24.88 18.22 210.90 63.11 74.58 501.60 266.34 211.73 174.76 0.00 0.00 0.00 0.00 0.82 2.15 18 E4a_E5a KnownJunction 0 431.56 8.95 7.78 14.25 18.76 21.29 10.38 42.80 19.21 18.94 204.47 85.83 67.85 434.11 236.23 161.24 158.49 0.00 0.00 0.00 0.00 0.00 3.76 19 ER5a ExonRegion 0 270.80 2.40 5.92 10.66 25.00 17.32 11.81 26.94 28.29 12.14 195.90 63.18 60.05 439.36 209.66 204.38 166.23 0.00 0.00 0.00 0.00 0.75 1.54 20 E5a_E6a KnownJunction 0 247.90 0.00 8.37 10.55 28.95 7.89 10.07 35.61 41.41 12.49 184.78 82.98 58.44 505.04 203.97 245.58 176.44 0.00 0.00 0.00 0.00 0.00 0.00 21 ER6a ExonRegion 0 181.62 3.51 10.52 19.36 18.82 12.71 14.47 35.17 32.60 10.07 199.46 62.55 94.04 491.30 274.72 280.25 227.88 0.00 0.00 0.00 0.00 0.18 2.48 22 E6a_E8a KnownJunction 0 331.10 5.13 21.55 30.33 11.46 29.24 11.97 43.58 25.17 8.68 228.37 67.37 133.60 543.35 282.71 318.04 250.30 0.00 0.00 0.00 0.00 0.00 0.00 23 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER7b ExonRegion 0 8.34 0.00 0.00 0.00 0.00 0.81 0.00 0.00 0.00 0.00 0.05 0.00 1.70 2.46 1.80 2.61 2.90 0.00 0.00 0.00 0.00 0.00 0.00 25 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER8a ExonRegion 0 134.20 0.97 12.72 29.13 32.78 21.36 17.36 46.35 34.26 11.20 321.27 75.35 107.59 629.37 306.39 315.89 270.81 0.00 0.00 0.00 0.00 3.47 0.12 27 E8a_E9a KnownJunction 0 149.36 0.00 9.14 21.31 75.13 28.85 24.11 44.03 41.43 15.10 237.43 67.52 67.20 428.34 308.05 296.85 261.34 0.00 0.00 0.00 0.00 2.63 0.00 28 ER9a ExonRegion 0 211.43 2.38 14.18 19.56 45.57 18.30 12.26 51.91 43.42 15.53 309.93 89.93 114.67 594.44 318.61 341.98 249.68 0.00 0.00 0.00 0.00 1.84 4.08 29 E9_Da KnownBoundary 1 43.93 0.00 1.60 4.69 11.38 15.96 4.37 13.18 12.73 8.03 53.70 49.67 39.61 223.38 110.88 89.29 22.07 0.00 0.00 0.00 0.00 0.00 3.16 30 E9a_E9b KnownJunction 0 225.45 0.00 6.27 9.96 34.13 7.67 7.68 34.34 19.44 5.99 254.06 32.56 79.22 321.80 204.59 245.32 192.24 0.00 0.00 0.00 0.00 3.12 3.67 31 ER9b ExonRegion 0 79.05 1.58 3.98 4.53 5.73 7.41 1.49 14.92 15.17 8.19 89.43 31.10 27.37 170.93 106.58 103.05 90.81 0.00 0.00 0.00 0.00 0.17 0.48 32 E9_Db KnownBoundary 0 99.13 2.83 9.28 5.13 4.24 7.50 1.72 19.26 20.34 5.99 99.08 12.90 14.77 91.18 20.27 132.79 132.59 0.00 0.00 0.00 0.00 0.00 0.00 33 ER9c ExonRegion 0 131.06 2.77 2.67 2.30 11.08 6.38 6.07 11.47 11.76 4.11 58.21 27.23 40.83 141.62 66.70 84.08 50.99 0.00 0.00 0.00 0.00 0.55 3.06 34 E9_Ab KnownBoundary 0 73.57 0.00 0.00 2.06 11.46 8.69 1.99 9.69 6.89 0.00 38.22 23.71 6.33 128.14 46.60 45.63 26.83 0.00 0.00 0.00 0.00 0.00 0.00 35 ER9d ExonRegion 0 270.13 1.28 5.33 11.19 38.95 9.08 9.91 37.66 29.50 9.79 316.41 47.52 92.49 493.13 280.14 279.38 191.84 0.00 0.00 0.00 0.00 1.31 0.75 36 E9_Dc NovelBoundary 0 285.09 3.09 3.05 4.99 34.80 4.66 9.05 24.73 26.07 9.48 222.74 77.73 102.75 406.79 236.23 168.42 148.20 0.00 0.00 0.00 0.00 0.00 0.00 37 E9d_E10a KnownJunction 0 122.39 0.00 18.33 22.41 48.90 10.22 18.15 36.47 40.65 15.07 271.60 43.66 97.56 438.58 302.86 168.84 236.47 0.00 0.00 0.00 0.00 5.76 0.00 38 ER9e ExonRegion 0 182.60 2.03 13.59 14.43 38.92 7.42 11.98 30.48 33.68 13.29 274.91 63.37 92.10 447.30 268.10 178.19 199.40 0.00 0.00 0.00 0.00 3.22 0.53 39 ER10a ExonRegion 0 63.71 0.30 9.42 10.21 21.00 15.43 13.43 20.94 27.70 5.42 181.92 71.58 85.48 359.90 248.05 123.70 151.96 0.00 0.00 0.79 0.00 0.93 1.89 40 E10_Da KnownBoundary 0 76.31 3.22 6.48 13.38 36.25 7.44 6.36 27.85 33.94 9.05 133.03 24.61 80.35 384.02 282.34 148.94 175.69 0.00 0.00 0.00 0.00 0.00 3.50 41 ER10b ExonRegion 0 94.90 1.09 2.73 11.25 21.77 6.84 6.00 15.94 15.91 7.65 135.96 49.62 49.40 262.89 184.66 126.01 110.13 0.38 0.00 0.43 0.00 0.00 1.91 42 ER10c ExonRegion 0 43.39 0.00 0.00 0.00 2.68 0.00 1.32 0.00 0.00 0.00 4.83 12.99 4.69 15.43 23.21 7.43 4.95 0.00 0.00 0.00 0.00 0.00 0.00