Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	APOL1	Gene	0	76.22	4.77	19.51	24.32	35.23	22.54	12.05	39.02	53.65	9.75	28.56	81.86	65.90	184.97	292.03	92.57	64.94	3.04	4.51	5.34	20.90	14.08	17.85
2	397278	Transcript	0	0.00	1.54	0.00	0.00	2.93	4.50	0.45	2.70	0.60	0.00	0.00	0.00	0.00	3.06	1.97	0.00	0.00	1.10	0.00	0.65	0.00	0.00	2.98
3	441201	Transcript	0	0.37	0.00	0.00	0.00	0.23	0.16	0.23	0.45	0.48	0.00	0.17	0.62	0.00	2.54	2.36	1.03	1.67	0.00	0.00	0.00	0.00	0.00	0.00
4	440669	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	422706	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	426053	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	319136	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	422471	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	475519	Transcript	0	2.12	0.64	2.43	1.35	5.35	0.87	0.88	2.77	6.22	0.57	1.93	7.13	7.72	25.37	19.17	12.18	11.00	3.48	1.06	0.00	2.71	0.69	2.94
10	438034	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	439680	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
12	427990	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
13	416338	Transcript	0	7.56	0.00	0.00	3.63	0.00	2.78	0.00	3.98	6.97	3.12	2.42	12.15	8.28	4.94	0.00	4.36	8.51	0.00	0.00	0.00	0.00	0.00	0.00
14	433768	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
15	431184	Transcript	0	2.29	0.00	0.00	0.95	2.37	1.48	0.36	1.53	0.70	0.00	2.43	4.22	1.82	10.84	7.63	7.79	3.03	0.00	0.00	0.00	0.00	0.86	1.21
16	455224	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
17	397279	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
18	ER1a	ExonRegion	0	0.00	1.54	0.00	0.00	2.93	4.50	0.45	2.70	0.60	0.00	0.00	0.00	0.00	3.06	1.97	0.00	0.00	1.10	0.00	0.65	0.00	0.00	2.98
19	E1_Ab	KnownBoundary	0	0.00	0.00	5.00	0.00	3.82	36.23	3.97	5.05	0.00	1.53	4.74	0.00	0.00	0.00	0.00	8.03	12.25	0.00	0.00	0.00	0.00	0.00	0.00
20	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	7.64	0.00	4.15	0.00	1.79	0.00	0.00	0.00	0.00	4.94	4.45	0.00	0.00	0.00	0.00	3.26	0.00	0.00	4.27
21	ER1b	ExonRegion	0	0.00	1.16	0.00	0.00	6.12	7.34	2.65	5.19	1.24	0.00	0.00	0.00	0.00	4.87	4.97	0.00	0.00	1.85	0.00	2.13	0.00	0.00	3.36
22	ER1c	ExonRegion	1	43.09	0.61	3.84	5.86	47.56	33.70	18.54	12.49	10.02	0.00	30.05	0.00	0.00	82.03	68.75	70.49	46.90	1.12	0.00	1.00	25.28	7.90	16.12
23	E1_Ad	KnownBoundary	0	35.86	0.00	0.00	0.00	54.07	19.70	24.47	1.77	1.77	0.00	18.43	0.00	0.00	26.43	5.19	34.18	33.19	0.00	0.00	0.00	21.81	2.82	15.02
24	E1_Ae	KnownBoundary	0	7.04	0.00	0.00	0.00	4.24	5.51	4.42	2.51	1.74	0.00	2.63	0.00	0.00	0.00	11.87	16.66	4.49	0.00	0.00	0.00	0.00	3.06	0.00
25	E1_Af	KnownBoundary	0	37.41	3.16	14.55	12.02	25.04	22.83	11.04	25.34	49.77	8.27	31.22	0.00	0.00	27.61	10.75	50.76	42.36	12.81	0.00	0.00	12.36	12.43	12.89
26	E1_Ag	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER1d	ExonRegion	1	99.48	2.03	9.80	12.27	86.96	77.02	30.45	20.74	23.47	0.00	69.58	0.00	0.00	200.58	137.81	184.27	112.23	0.00	0.00	0.00	50.69	20.84	29.37
28	E1_Ah	KnownBoundary	1	628.33	5.13	25.52	31.96	373.68	293.81	145.47	83.13	136.86	12.81	199.47	5.70	6.33	324.27	367.39	658.12	241.05	7.46	12.71	0.00	137.95	82.97	131.80
29	ER1e	ExonRegion	1	99.97	2.03	11.82	14.11	84.36	81.12	25.54	22.37	31.46	0.07	69.93	2.04	7.72	239.03	176.12	202.28	117.08	0.00	0.00	0.00	59.76	20.22	24.53
30	ER1f	ExonRegion	1	147.96	2.03	23.06	29.98	107.76	119.86	24.79	30.96	60.52	3.02	71.17	9.45	10.23	492.85	480.03	265.06	185.75	0.00	0.00	0.00	61.30	16.48	14.68
31	ER1g	ExonRegion	1	167.91	2.03	26.96	40.89	113.27	121.03	27.80	32.84	72.05	5.73	73.45	12.99	14.07	525.13	622.80	301.18	216.76	0.00	0.00	0.00	50.69	14.58	12.73
32	ER1h	ExonRegion	0	114.60	0.07	23.08	34.77	75.60	79.35	14.59	23.32	71.55	7.19	35.74	15.59	9.38	287.14	337.71	147.42	143.38	0.00	0.00	0.00	25.48	6.10	10.73
33	E1a_E2a	KnownJunction	0	0.00	0.00	3.67	0.00	0.00	0.00	0.00	0.00	2.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E1a_E3a	KnownJunction	0	2.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.84	0.00	0.00	0.00	0.00	2.47	0.00	0.00	8.88	0.00	0.00	0.00	3.15	2.57	0.00
35	E1a_E3b	KnownJunction	0	7.41	0.00	9.96	24.97	12.82	12.27	1.99	13.27	42.82	8.09	11.37	18.76	0.00	31.90	32.76	7.18	17.58	0.00	0.00	0.00	5.56	0.00	14.51
36	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E2_Aa	NovelBoundary	1	11.34	0.00	0.00	1.80	0.00	5.79	2.25	12.32	16.81	9.56	0.00	0.00	8.28	12.18	10.75	42.72	0.00	0.00	0.00	3.26	3.15	3.12	0.00
38	ER2a	ExonRegion	0	0.00	0.00	2.10	2.22	1.08	0.00	0.00	0.73	2.46	0.00	3.13	2.89	0.00	6.56	8.50	5.76	6.68	0.00	0.00	0.00	0.00	0.00	0.00
39	E2_Da	NovelBoundary	0	13.34	0.00	0.00	16.88	13.58	24.42	14.97	12.03	30.03	10.66	9.21	43.21	46.26	53.03	57.11	39.14	7.48	3.27	9.22	8.12	2.53	11.94	22.02
40	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.00	0.00	0.00	4.94	24.72	12.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER2b	ExonRegion	0	0.00	0.00	0.00	1.17	0.00	0.00	0.00	1.42	2.91	0.00	0.00	0.00	0.00	6.55	21.76	7.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER3a	ExonRegion	0	0.79	0.00	1.26	0.92	0.60	0.60	0.76	2.07	3.83	0.20	2.22	0.65	0.12	5.60	7.04	1.78	6.68	0.00	0.00	0.00	1.60	2.45	1.54
44	E3_Ab	KnownBoundary	0	0.00	0.00	1.39	0.00	0.00	0.00	3.62	2.38	3.99	0.00	2.11	0.00	0.00	7.18	0.00	4.02	0.00	0.00	0.00	0.00	0.00	3.12	3.84
45	ER3b	ExonRegion	1	4.54	0.00	9.61	8.73	6.56	9.82	1.99	18.85	45.22	3.98	52.00	58.24	33.89	85.53	82.08	24.40	86.57	0.00	0.00	0.00	49.83	6.89	13.55
46	E3_Da	NovelBoundary	0	0.00	0.00	5.35	1.63	3.48	2.56	0.00	4.03	12.07	2.55	9.79	0.00	0.00	9.95	6.30	4.36	12.44	0.00	0.00	0.00	0.00	2.88	3.84
47	E3a_E5a	KnownJunction	1	9.26	0.00	12.71	10.75	3.90	10.79	0.00	25.47	43.29	4.11	85.97	73.82	34.74	142.50	96.67	31.27	174.29	0.00	0.00	0.00	63.26	8.33	11.18
48	E3a_E6a	KnownJunction	0	0.00	0.00	3.19	0.00	0.00	0.00	0.00	0.00	10.68	2.15	0.00	0.00	0.00	5.06	0.00	6.75	9.16	0.00	0.00	0.00	15.26	5.27	0.00
49	ER4a	ExonRegion	0	1.48	0.00	0.00	0.00	0.93	0.64	0.92	1.80	1.93	0.00	0.68	2.49	0.00	10.15	9.44	4.13	6.69	0.00	0.00	0.00	0.00	0.00	0.00
50	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	I4_SR2	SilentIntronRegion	0	2.22	0.00	1.91	0.00	0.00	2.56	0.92	0.90	3.21	0.60	2.03	17.97	4.34	7.51	7.57	7.27	6.92	0.00	0.00	0.00	2.31	0.00	0.00
52	E5_Ab	NovelBoundary	0	14.22	0.00	21.52	23.97	0.00	2.90	0.00	29.33	46.79	5.26	28.43	6.00	19.15	277.95	143.03	130.48	131.56	0.00	0.00	0.00	24.46	26.33	14.68
53	ER5a	ExonRegion	0	10.20	0.00	17.49	17.41	1.82	7.67	0.42	27.97	48.17	4.64	64.49	42.31	26.22	220.95	122.91	89.03	159.19	0.00	0.00	0.00	46.78	21.59	11.88
54	ER5b	ExonRegion	0	17.59	0.00	22.55	28.41	1.76	3.50	1.32	26.03	57.16	6.92	34.01	18.40	22.57	375.73	328.02	183.62	135.85	0.00	0.00	0.00	28.10	29.63	22.21
55	E5a_E6a	KnownJunction	0	22.37	0.00	29.83	34.00	3.82	4.77	1.90	24.27	65.45	5.99	17.90	41.56	41.39	425.22	491.38	217.29	103.79	0.00	0.00	0.00	29.59	23.45	30.39
56	ER6a	ExonRegion	0	15.22	0.64	30.10	37.38	47.14	24.97	7.05	42.92	92.90	8.81	40.44	74.91	61.71	332.85	448.26	192.32	97.02	0.33	0.00	0.00	27.88	22.73	16.07
57	E6_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	2.90	0.00	4.19	7.84	0.00	0.00	0.00	0.00	9.77	4.45	18.71	0.00	1.78	0.00	0.00	2.90	0.00	0.00
58	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.01	7.42	9.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	E6a_E9a	KnownJunction	0	42.23	3.35	27.26	43.92	74.70	69.96	27.91	52.49	85.10	10.05	37.48	109.99	110.38	240.57	258.24	111.94	48.06	0.00	0.00	0.00	30.58	5.88	12.21
60	ER6b	ExonRegion	0	2.12	0.64	2.43	1.35	5.35	0.87	0.88	2.77	6.22	0.57	1.93	7.13	7.72	25.37	19.17	12.18	11.00	3.48	1.06	0.00	2.71	0.69	2.94
61	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	ER8a	ExonRegion	0	7.68	0.55	0.50	1.31	0.63	0.53	0.84	5.66	3.53	0.00	2.03	6.54	8.01	33.14	22.86	18.34	8.94	0.00	0.00	0.00	0.00	1.13	1.59
63	E8_Da	KnownBoundary	0	3.70	0.00	0.00	3.66	4.07	0.00	2.12	4.27	2.78	0.00	4.47	7.65	0.00	20.19	35.35	11.96	4.02	0.00	0.00	0.00	0.00	0.00	0.00
64	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	2.06	0.00	0.00	0.00	3.98	0.00	0.00	0.00	0.00	0.00	2.47	12.11	12.39	9.44	0.00	0.00	0.00	0.00	0.00	0.00
65	ER8b	ExonRegion	0	4.57	0.00	0.00	1.89	4.75	2.96	0.73	3.07	1.39	0.00	4.86	8.45	3.63	21.69	15.25	15.58	6.07	0.00	0.00	0.00	0.00	1.71	2.42
66	E8_Db	NovelBoundary	1	0.00	0.00	0.00	2.06	4.33	0.00	0.00	0.00	7.41	0.00	2.68	18.46	21.26	30.73	18.54	37.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	E8b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	ER9a	ExonRegion	0	48.96	1.39	32.73	31.49	112.24	126.29	24.35	52.99	81.94	10.14	40.13	93.88	86.52	273.07	300.36	140.71	104.59	0.00	0.00	0.00	15.25	20.89	13.76
69	E9_Da	KnownBoundary	0	46.97	0.00	22.77	14.82	145.76	121.52	23.67	28.71	54.48	7.01	21.01	74.12	44.80	140.21	173.06	128.51	113.32	0.00	0.00	0.00	3.09	20.33	12.80
70	E9_Db	KnownBoundary	0	95.57	0.00	12.71	12.12	37.18	29.36	4.46	19.59	21.09	4.62	36.27	53.12	61.36	122.08	162.93	59.30	45.54	0.00	0.00	0.00	20.63	24.37	12.55
71	ER9b	ExonRegion	0	98.71	0.00	33.53	30.23	106.79	126.53	21.79	62.07	96.11	12.30	56.76	106.66	100.62	303.86	321.51	141.58	132.64	0.00	0.00	0.00	20.84	32.39	19.49
72	E9_Dc	KnownBoundary	1	65.27	0.00	3.61	5.89	4.33	21.07	6.40	16.80	28.93	3.04	19.22	24.61	39.12	48.09	58.35	15.47	61.90	0.00	0.00	0.00	8.71	0.00	3.93
73	E9_Dd	KnownBoundary	0	39.56	0.00	8.72	5.59	0.00	5.62	2.08	4.81	15.34	3.06	12.48	13.35	13.47	22.43	61.81	40.84	21.51	0.00	0.00	0.00	5.87	6.06	8.54
74	ER9c	ExonRegion	0	129.91	0.00	36.38	28.57	50.19	71.96	20.09	56.80	94.08	13.68	64.12	131.68	116.12	273.97	324.64	122.16	118.49	0.00	0.00	0.00	37.01	28.74	19.85
75	E9_De	NovelBoundary	0	107.20	2.76	35.27	35.03	57.47	123.68	34.93	58.86	105.73	23.67	72.02	46.37	46.10	177.53	336.12	132.53	80.97	6.47	13.27	3.07	94.83	23.33	39.69
76	ER9d	ExonRegion	0	107.94	0.00	30.63	31.35	20.07	58.68	14.56	58.77	92.63	14.91	66.69	123.39	103.18	240.37	351.05	118.89	99.03	0.00	0.00	0.00	48.48	23.96	23.49
77	ER9e	ExonRegion	0	109.00	1.53	26.40	32.65	22.97	56.16	15.45	63.45	89.75	15.10	56.62	93.44	75.63	224.33	368.82	107.12	93.39	0.00	0.00	0.00	52.61	21.36	18.72
78	E9f_E10a	KnownJunction	0	233.52	2.57	28.98	52.01	43.55	46.39	10.07	73.69	85.68	15.63	57.44	64.97	67.69	318.21	386.18	102.11	113.70	0.00	0.00	0.00	19.40	28.47	3.84
79	ER9f	ExonRegion	0	132.70	2.03	32.02	45.21	26.52	41.86	9.27	64.55	82.00	15.11	58.07	52.14	54.04	249.69	355.34	105.58	86.83	0.16	0.00	0.00	39.76	24.28	12.90
80	ER10a	ExonRegion	0	148.44	1.98	37.10	56.87	39.15	26.02	4.99	75.38	108.59	14.42	54.98	135.39	122.17	374.16	480.59	170.58	106.67	0.83	0.00	0.00	44.78	29.25	19.90
81	E10_Da	KnownBoundary	0	118.76	0.00	42.19	54.77	66.98	15.39	8.35	55.90	139.50	5.94	48.64	108.19	116.88	406.44	595.34	166.02	122.49	0.00	0.00	0.00	36.08	15.80	8.11
82	ER10b	ExonRegion	0	122.59	1.57	33.58	43.58	57.70	34.04	11.68	66.35	96.71	12.80	42.26	129.17	99.67	306.97	477.21	135.99	91.11	0.00	1.39	0.00	33.21	19.14	19.94
83	E10_Db	KnownBoundary	0	7.33	6.31	26.17	22.04	8.23	10.79	16.12	51.22	36.02	13.83	11.42	77.43	93.01	141.50	280.24	57.16	62.18	26.90	9.41	6.20	25.88	47.03	23.73
84	E10b_E10b	KnownJunction	0	7.56	0.00	0.00	3.63	0.00	2.78	0.00	3.98	6.97	3.12	2.42	12.15	8.28	4.94	0.00	4.36	8.51	0.00	0.00	0.00	0.00	0.00	0.00
85	ER10c	ExonRegion	0	26.55	13.50	14.10	15.08	31.66	14.73	20.40	19.21	24.07	10.37	17.22	78.18	77.53	143.77	212.38	83.59	54.18	12.77	14.47	19.22	13.61	14.30	30.14
86	E10_Ab	KnownBoundary	1	863.56	811.11	388.57	591.93	672.84	406.36	655.46	522.95	474.82	384.13	243.48	70.67	142.36	130.20	225.11	740.75	582.42	770.78	620.44	673.69	344.66	310.09	724.73
87	ER10d	ExonRegion	0	160.18	8.87	25.64	30.72	44.14	24.74	19.96	66.76	75.14	18.39	38.63	135.60	93.25	203.79	466.99	109.90	78.97	2.01	7.77	9.16	24.07	18.65	24.55
88	E10_Dc	KnownBoundary	0	282.86	0.00	19.96	44.92	48.05	15.62	18.20	43.87	61.34	11.09	35.90	44.86	116.71	102.66	312.26	70.32	40.49	0.00	0.00	3.20	17.54	14.45	8.11
89	ER10e	ExonRegion	1	73.06	0.00	4.31	12.64	9.78	3.48	4.93	16.39	16.74	3.32	10.93	18.06	44.80	40.77	145.56	19.37	16.73	0.00	0.00	0.00	3.95	4.10	3.24
90	ER10f	ExonRegion	0	14.29	0.00	0.00	0.00	2.01	1.83	1.32	7.35	4.63	0.57	4.35	0.00	0.00	14.62	31.19	2.97	1.65	0.00	0.00	0.00	1.10	1.56	0.00
91	ER10g	ExonRegion	0	6.35	0.00	0.00	0.00	0.00	1.83	0.00	2.07	0.25	0.00	1.16	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00