Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 APOBEC3H Gene 0 7.90 0.08 0.74 4.61 6.41 4.39 0.75 3.87 5.15 1.32 8.23 26.88 10.03 48.24 16.43 69.58 29.33 0.00 0.26 0.17 0.99 0.59 0.95 2 348946 Transcript 0 3.68 0.00 0.39 0.97 2.01 2.89 0.00 2.02 2.09 0.25 4.51 8.30 0.00 27.39 8.64 26.77 9.76 0.00 0.00 0.00 0.00 0.62 0.00 3 474235 Transcript 0 0.00 0.00 0.86 4.51 0.00 1.73 2.50 0.00 3.27 0.00 0.91 0.00 1.82 7.71 2.74 12.82 1.77 0.00 1.68 0.08 1.06 0.00 1.33 4 401756 Transcript 0 0.00 0.00 0.56 3.42 5.29 2.14 0.00 1.49 0.00 1.41 5.91 4.97 0.07 10.65 0.00 2.01 3.07 0.00 0.00 0.00 0.00 0.00 0.60 5 442487 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 396749 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 421988 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 448746 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 342641 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ER1a ExonRegion 0 7.10 0.00 0.00 0.91 6.02 6.34 0.00 2.56 3.11 0.74 3.22 0.00 0.00 44.46 10.46 60.56 20.22 0.00 0.00 0.00 0.00 1.87 0.00 11 E1_Ab KnownBoundary 0 0.00 0.00 0.00 1.47 12.73 2.73 0.00 2.01 1.77 0.00 5.26 0.00 0.00 32.90 4.45 70.41 23.66 0.00 0.00 0.00 0.00 2.45 0.00 12 E1_Ac KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Ad KnownBoundary 0 42.97 0.00 0.00 5.16 12.22 27.77 0.00 3.98 3.85 0.00 5.37 0.00 0.00 54.04 5.19 131.76 64.98 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1b ExonRegion 0 26.99 0.00 0.00 2.73 10.70 23.84 0.00 6.91 3.71 1.15 7.73 0.00 0.00 110.85 21.03 160.49 62.72 0.00 0.00 0.00 0.00 2.08 0.00 15 ER1c ExonRegion 1 25.40 0.00 0.00 2.73 12.31 24.21 0.00 6.91 3.71 1.15 7.73 0.00 1.41 108.33 14.80 163.76 59.42 0.00 0.00 0.00 0.00 0.83 0.00 16 ER1d ExonRegion 1 21.27 0.00 0.00 3.43 16.24 13.12 0.00 6.94 3.02 0.61 2.80 3.14 3.40 77.37 11.30 138.10 49.34 0.00 0.00 0.00 1.79 0.00 2.58 17 E1a_E2a KnownJunction 0 7.26 0.00 0.00 1.76 31.24 0.00 0.00 2.09 3.59 0.00 2.47 6.00 6.49 48.68 13.85 186.96 45.07 0.00 0.00 0.00 0.00 0.00 0.00 18 ER2a ExonRegion 0 6.35 0.00 0.00 1.36 19.40 0.00 0.00 1.73 3.71 0.00 1.93 4.33 4.69 49.94 13.06 139.69 37.14 0.00 0.00 0.00 2.20 0.00 0.00 19 ER2b ExonRegion 0 1.99 0.00 0.00 5.34 4.13 0.61 0.00 4.63 5.34 1.71 8.26 14.32 7.82 55.47 20.27 85.18 52.27 0.00 0.94 0.65 0.86 0.30 0.33 20 E2_Da KnownBoundary 0 0.00 0.00 0.00 8.82 0.00 0.00 0.00 0.00 4.37 0.00 0.00 0.00 0.00 2.41 0.00 8.29 3.55 0.00 0.00 0.00 0.00 0.00 0.00 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 2.96 7.13 0.00 0.00 1.85 4.28 0.00 16.11 0.00 13.96 86.29 36.34 161.24 58.81 0.00 0.00 0.00 2.47 3.12 3.93 22 ER2c ExonRegion 0 0.00 0.00 0.86 4.51 0.00 1.73 2.50 0.00 3.27 0.00 0.91 0.00 1.82 7.71 2.74 12.82 1.77 0.00 1.68 0.08 1.06 0.00 1.33 23 ER3a ExonRegion 0 6.47 0.00 0.96 1.87 8.44 6.63 0.25 3.34 6.99 1.63 8.06 22.13 10.48 51.95 21.71 82.47 33.86 0.00 0.00 0.00 0.76 0.23 1.61 24 E3a_E4a KnownJunction 0 10.30 0.00 1.45 0.00 0.00 0.00 0.00 4.93 5.35 0.00 7.32 29.71 0.00 61.39 6.06 72.72 25.71 0.00 0.00 0.00 0.00 0.00 3.41 25 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E4_Aa NovelBoundary 0 3.78 0.00 3.49 17.41 3.57 7.95 0.00 2.05 3.24 2.53 0.00 6.30 0.00 31.26 13.35 67.59 25.34 0.00 0.00 0.00 0.00 3.12 0.00 27 ER4a ExonRegion 0 8.25 0.00 1.52 6.47 2.59 3.99 1.08 5.63 8.65 2.12 13.64 44.44 18.76 69.04 23.63 106.95 35.39 0.00 0.00 0.00 0.90 0.10 0.99 28 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.09 0.00 0.00 7.37 12.60 0.00 0.00 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E4a_E6a KnownJunction 0 18.45 0.00 1.74 5.03 8.15 0.00 0.00 0.00 3.47 2.23 7.42 12.15 13.64 33.37 6.30 71.18 21.04 0.00 0.00 0.00 0.00 0.00 0.00 30 E4a_E6b KnownJunction 0 2.89 0.00 1.18 1.33 0.00 2.33 0.00 3.49 3.15 0.00 10.32 24.91 0.00 35.67 15.45 19.74 9.07 0.00 0.00 0.00 0.00 0.00 0.00 31 ER4b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER5a ExonRegion 0 0.00 0.00 0.83 3.16 4.04 2.50 0.00 1.62 0.00 0.00 4.07 11.24 6.49 1.94 0.00 1.90 2.81 0.00 0.00 0.00 0.00 0.00 1.50 33 E5_Da KnownBoundary 0 0.00 0.00 0.00 7.56 0.00 8.35 0.00 0.00 0.00 0.00 0.00 0.00 6.82 2.41 0.00 4.36 3.93 0.00 0.00 0.00 0.00 0.00 4.35 34 E5_Db KnownBoundary 0 0.00 0.00 0.00 10.75 8.57 0.00 0.00 0.00 0.00 1.02 2.68 6.15 0.00 19.60 0.00 4.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER5b ExonRegion 1 0.00 0.00 1.23 5.03 5.76 3.67 0.00 0.00 0.00 0.62 4.16 8.99 6.49 13.99 0.00 5.94 2.79 0.00 0.00 0.00 0.00 0.00 2.94 36 ER5c ExonRegion 1 0.00 0.00 1.12 4.77 6.77 1.56 0.00 1.22 0.00 1.15 6.77 9.93 0.14 14.00 0.00 4.02 1.65 0.00 0.00 0.00 0.00 0.00 1.21 37 E5c_E6a KnownJunction 0 0.00 0.00 0.00 2.06 3.82 2.73 0.00 1.77 0.00 1.67 5.05 0.00 0.00 7.30 0.00 0.00 4.49 0.00 0.00 0.00 0.00 0.00 0.00 38 ER6a ExonRegion 0 6.88 0.00 1.53 8.18 8.03 2.75 0.00 4.32 6.79 3.44 14.50 22.73 12.90 49.94 18.86 65.39 30.53 0.00 0.00 0.00 0.00 4.17 0.00 39 ER6b ExonRegion 0 8.47 0.00 2.45 8.18 9.63 5.50 0.00 6.91 8.40 3.44 24.74 40.70 9.38 81.21 24.37 88.57 47.53 0.00 0.00 0.00 0.00 4.17 0.00 40 ER6c ExonRegion 0 13.85 0.34 0.93 7.55 8.91 4.33 0.94 5.26 6.06 1.76 13.10 57.05 14.57 60.48 20.60 73.99 32.37 0.00 0.00 0.13 1.54 1.60 0.50 41 E6_Db KnownBoundary 0 176.33 81.89 50.71 60.90 125.98 55.59 162.47 70.07 42.48 42.84 23.06 113.74 108.76 104.60 38.82 137.06 57.69 63.92 57.79 90.25 36.70 22.66 53.52 42 ER6d ExonRegion 0 10.06 0.00 0.00 2.66 1.61 0.00 2.91 2.63 1.03 0.00 1.37 22.45 14.65 13.07 9.95 8.28 0.41 0.00 0.00 1.05 1.49 0.00 0.00 43 ER6e ExonRegion 0 1.06 0.00 0.00 0.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00