Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	HMGXB4	Gene	0	65.85	122.27	47.38	72.71	78.63	58.86	76.64	59.99	35.18	58.06	112.41	97.88	61.69	100.58	57.27	67.26	83.75	75.76	54.32	71.69	47.40	68.42	58.78
2	420166	Transcript	0	0.00	0.23	0.00	0.00	0.00	0.10	1.21	0.00	0.00	0.00	1.40	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	1.36	0.00	0.00	2.28
3	418170	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.73	0.00	3.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	466438	Transcript	0	1.94	1.13	0.64	1.28	0.67	0.46	0.80	3.27	0.93	2.05	2.54	3.68	0.58	3.03	2.26	1.80	2.66	2.66	1.93	4.08	2.44	0.42	1.63
5	455359	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	397384	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	397385	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	216106	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	498325	Transcript	0	3.94	5.20	0.73	6.57	5.07	2.61	6.83	5.21	3.87	2.48	8.80	16.42	12.08	3.14	2.09	5.17	8.84	3.23	2.13	6.93	2.43	0.70	4.14
10	444518	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	464480	Transcript	0	2.88	3.99	1.77	6.01	3.51	1.49	6.13	2.71	2.68	2.45	4.24	1.79	10.88	2.29	3.08	6.18	8.66	2.78	1.34	5.74	3.76	2.14	1.87
12	498212	Transcript	0	24.58	26.79	6.54	31.48	14.72	5.99	18.83	18.62	11.72	17.94	12.87	13.54	9.55	7.50	7.57	8.20	7.56	13.47	3.51	13.45	3.05	8.91	13.30
13	ER1a	ExonRegion	0	0.00	0.23	0.00	0.00	0.00	0.10	1.21	0.00	0.00	0.00	1.40	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	1.36	0.00	0.00	2.28
14	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	4.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00	0.00	0.00	0.00	0.00
15	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E1_Ae	KnownBoundary	0	0.00	2.96	0.00	1.27	0.00	2.44	1.90	0.00	1.36	1.67	0.00	0.00	0.00	0.00	0.00	0.00	3.83	0.00	0.00	0.00	0.00	0.00	0.00
18	ER1b	ExonRegion	0	0.00	2.03	0.00	0.00	0.00	1.83	2.65	0.00	0.00	0.00	1.93	0.00	0.00	3.25	0.00	0.00	3.30	0.00	0.00	2.13	0.00	0.00	2.94
19	ER1c	ExonRegion	0	0.00	2.91	0.00	0.00	0.00	2.62	3.40	0.00	0.35	0.00	1.93	0.00	0.00	3.94	0.00	1.70	4.24	0.00	0.00	2.43	0.00	0.00	3.78
20	ER1d	ExonRegion	0	0.00	18.30	0.00	0.68	2.68	19.25	16.55	2.59	1.24	1.15	1.93	0.00	0.00	8.12	2.90	2.97	6.60	0.00	0.00	7.45	1.10	2.08	5.87
21	ER1e	ExonRegion	1	41.29	112.74	26.83	33.70	64.90	88.77	90.64	22.35	12.50	37.52	55.27	1.54	11.53	74.85	70.27	74.81	88.34	33.67	41.95	58.42	28.61	48.06	78.59
22	E1a_E2a	KnownJunction	0	3.19	0.00	0.00	1.53	0.00	0.00	0.00	2.55	0.00	2.82	1.95	0.00	0.00	0.00	0.00	0.00	0.00	1.99	0.00	2.94	0.00	0.00	0.00
23	E1a_E3b	KnownJunction	0	25.93	88.93	20.49	29.87	87.44	36.85	47.83	9.45	12.82	35.75	54.54	6.75	0.00	39.38	13.47	40.76	77.05	39.92	13.65	64.17	23.23	6.12	19.55
24	E1a_E4b	KnownJunction	1	83.94	106.23	52.16	63.10	123.60	107.61	94.82	39.84	15.13	52.97	70.65	6.30	21.59	91.71	43.64	157.99	69.47	56.96	101.65	66.54	31.38	69.38	188.05
25	ER2a	ExonRegion	0	0.69	2.27	1.29	1.02	1.35	0.92	1.60	4.00	1.86	1.28	3.14	7.37	1.17	6.07	4.52	3.59	5.32	3.33	3.85	5.21	4.88	0.84	3.26
26	I2_AR2	ActiveIntronRegion	1	0.00	2.29	5.82	1.92	9.70	5.50	6.91	3.29	1.16	3.80	0.00	20.43	10.70	1.07	6.89	0.84	0.00	3.75	3.19	4.26	0.00	7.29	0.00
27	ER3a	ExonRegion	0	3.94	5.20	0.73	6.57	5.07	2.61	6.83	5.21	3.87	2.48	8.80	16.42	12.08	3.14	2.09	5.17	8.84	3.23	2.13	6.93	2.43	0.70	4.14
28	E3_Ab	KnownBoundary	0	0.00	14.67	1.83	11.62	0.00	2.67	7.95	2.55	4.95	3.57	7.58	6.30	6.82	2.47	4.45	3.25	9.07	8.50	9.60	5.69	0.00	0.00	3.24
29	ER3b	ExonRegion	0	8.80	37.24	14.09	22.27	33.95	26.30	13.84	17.80	14.22	18.98	26.28	24.89	16.63	16.65	16.77	21.08	28.78	32.19	13.64	26.00	9.81	6.51	15.46
30	E3_Ac	KnownBoundary	1	3.19	21.25	10.35	4.53	18.25	20.16	1.94	21.65	8.85	11.55	14.37	18.91	35.87	9.83	18.79	25.12	22.72	15.92	4.80	6.20	9.45	5.69	0.00
31	ER3c	ExonRegion	0	7.78	9.51	13.33	11.50	13.14	10.25	11.68	21.61	6.76	18.11	49.52	17.19	19.45	19.82	13.23	22.12	51.26	14.89	20.70	19.84	23.20	7.48	3.80
32	E3a_E4b	KnownJunction	1	17.63	5.00	17.03	19.98	15.70	14.20	24.20	25.47	6.28	26.81	102.55	7.65	6.17	38.26	4.70	17.00	88.73	13.31	27.01	46.40	36.14	5.20	7.51
33	ER4a	ExonRegion	0	2.88	3.99	1.77	6.01	3.51	1.49	6.13	2.71	2.68	2.45	4.24	1.79	10.88	2.29	3.08	6.18	8.66	2.78	1.34	5.74	3.76	2.14	1.87
34	E4_Ab	KnownBoundary	0	7.56	2.89	3.08	11.89	4.33	0.00	17.80	4.23	3.67	6.29	0.00	0.00	20.29	0.00	0.00	0.00	3.93	2.57	0.00	2.94	8.59	8.21	0.00
35	ER4b	ExonRegion	0	21.98	44.33	56.10	75.20	40.82	53.16	45.07	59.41	40.55	73.55	142.09	72.20	50.54	136.35	51.40	110.09	128.96	101.56	67.75	120.46	69.95	67.70	111.24
36	E4a_E5a	KnownJunction	1	14.22	83.08	91.19	109.21	159.76	191.03	147.81	101.70	51.19	92.92	160.04	136.24	97.40	274.59	146.49	373.06	147.45	190.64	222.78	201.15	39.54	180.46	429.97
37	ER5a	ExonRegion	0	32.18	95.60	55.00	70.40	72.82	123.68	94.02	57.15	41.20	65.75	149.62	89.77	49.39	136.63	70.44	156.73	100.99	142.74	99.51	114.11	47.51	84.11	145.27
38	E5a_E6a	KnownJunction	1	0.00	65.32	8.16	18.98	11.71	36.68	32.15	24.69	11.02	42.09	106.13	29.86	6.82	50.03	13.97	32.30	59.56	37.23	31.25	51.33	12.79	35.27	19.63
39	E5a_E7a	KnownJunction	1	36.67	93.14	35.33	38.22	89.22	135.09	77.06	25.30	25.23	27.45	58.96	36.01	33.76	57.57	17.80	31.87	90.60	62.97	34.26	52.73	53.44	33.31	3.84
40	ER6a	ExonRegion	1	23.70	44.60	13.88	16.14	12.10	42.77	40.24	25.05	17.20	32.32	110.15	51.22	14.73	57.44	21.25	24.87	66.39	36.80	24.41	35.57	23.43	20.07	27.26
41	E6_Da	KnownBoundary	1	34.90	72.68	20.61	23.94	11.63	34.36	55.51	27.97	25.46	34.73	129.09	42.16	20.13	66.75	18.54	27.17	74.71	29.97	42.26	28.12	41.14	13.90	28.77
42	ER6b	ExonRegion	1	34.59	70.48	16.49	23.01	14.35	16.42	37.04	21.06	13.53	39.65	135.30	66.52	27.39	72.49	22.02	58.23	85.22	24.15	45.54	35.15	25.29	17.47	33.17
43	E6b_E7a	KnownJunction	1	53.34	87.68	20.70	33.56	18.85	8.23	33.65	26.49	9.17	53.13	140.30	83.28	20.45	68.16	39.68	81.77	89.39	24.04	40.38	41.10	17.73	24.49	35.25
44	ER7a	ExonRegion	0	88.50	172.85	45.57	65.59	142.32	191.75	176.09	47.32	30.96	68.67	184.83	165.33	66.83	145.16	56.21	94.92	178.25	95.27	72.47	122.21	74.10	66.93	40.56
45	ER7b	ExonRegion	0	123.48	142.04	65.00	70.30	95.05	59.24	95.43	69.95	44.73	67.10	172.53	134.33	69.01	164.73	68.27	103.29	141.56	128.70	91.37	103.39	97.69	86.86	82.27
46	E7_Db	KnownBoundary	1	267.23	122.02	30.40	21.44	109.42	70.13	123.96	18.11	8.74	23.37	71.54	51.17	60.55	100.07	25.71	24.44	64.52	20.06	56.00	66.67	23.66	24.25	44.22
47	E7_Dc	KnownBoundary	0	17.63	38.68	5.23	17.65	35.14	18.80	30.21	6.04	8.33	14.37	26.32	39.91	25.32	34.26	13.35	17.09	9.26	11.81	0.00	13.04	12.17	9.37	4.27
48	ER7c	ExonRegion	1	233.52	215.56	28.59	39.52	163.22	102.08	160.20	26.50	23.47	30.97	127.57	223.69	156.33	210.05	173.11	67.37	75.92	48.04	75.39	111.35	57.30	70.15	75.37
49	ER7d	ExonRegion	0	115.77	204.59	34.90	61.62	187.87	103.80	158.55	47.87	36.04	45.42	144.91	217.65	120.09	190.27	138.21	103.48	87.12	81.19	84.56	109.03	68.31	98.11	93.26
50	E7_Dd	NovelBoundary	0	10.45	12.10	6.42	0.00	36.84	5.79	16.47	4.72	1.48	1.50	4.47	6.30	6.82	0.00	10.63	11.36	23.28	2.45	16.66	12.34	0.00	3.12	8.71
51	E7d_E8a	KnownJunction	0	84.76	227.13	40.80	83.07	277.25	115.05	195.29	72.08	44.82	57.81	145.14	218.77	87.01	174.11	113.85	117.49	95.28	114.12	103.91	118.57	75.00	125.71	126.76
52	ER8a	ExonRegion	0	77.41	112.84	85.10	108.08	160.06	90.95	99.88	85.05	66.89	75.96	197.04	221.01	156.54	152.07	71.82	137.01	126.40	180.65	92.80	124.44	62.51	124.33	120.33
53	E8a_E9a	KnownJunction	1	39.34	71.11	85.63	109.18	64.86	28.62	72.29	88.23	70.89	86.09	150.14	357.42	232.29	173.52	72.56	215.16	89.57	209.17	103.34	141.64	64.80	175.25	140.17
54	I8	Intron	0	5.67	15.35	6.11	19.15	7.82	4.46	14.18	9.72	5.26	10.30	6.47	14.04	7.04	7.42	4.83	7.05	8.84	4.04	3.49	9.97	2.28	5.45	6.09
55	I8_SR1	SilentIntronRegion	0	4.45	9.91	6.40	16.81	9.14	2.83	13.71	10.63	4.59	9.87	5.78	18.28	9.11	7.78	4.89	7.55	8.97	3.73	3.91	10.29	2.32	5.48	5.96
56	I8_AR1	ActiveIntronRegion	0	8.50	27.93	5.50	24.67	4.84	8.24	15.37	7.72	6.85	11.37	8.10	4.45	2.33	6.64	4.73	5.97	8.62	4.76	2.56	9.33	2.21	5.44	6.41
57	E9_Aa	NovelBoundary	0	16.52	40.12	15.08	33.90	18.34	13.63	10.47	8.95	11.00	13.35	11.95	0.00	0.00	7.06	4.45	4.36	0.00	8.25	9.41	2.68	5.93	12.31	7.68
58	ER9a	ExonRegion	0	62.00	129.68	88.36	123.96	69.45	64.30	73.33	99.88	83.47	119.35	302.48	296.60	177.07	232.57	104.36	218.52	200.85	255.53	149.76	190.57	113.75	192.74	187.27
59	E9_Da	NovelBoundary	0	10.89	51.11	12.83	31.50	15.11	0.00	22.52	11.99	2.72	14.99	6.74	0.00	7.30	2.83	0.00	0.00	8.79	1.70	0.00	11.82	3.15	14.39	3.50
60	E9a_E10b	KnownJunction	0	69.20	153.39	116.82	161.22	44.91	100.57	101.04	131.52	95.66	129.15	454.38	262.14	182.94	255.28	159.71	163.12	330.62	225.67	160.76	226.84	160.31	165.88	162.96
61	I9	Intron	0	9.85	24.57	10.31	28.16	12.45	4.18	12.46	14.54	4.38	7.62	4.02	9.41	4.62	3.38	4.26	3.53	10.79	6.10	2.52	15.17	4.14	5.98	4.94
62	I9_AR1	ActiveIntronRegion	0	9.40	31.05	13.66	33.34	13.35	2.33	14.56	15.08	2.80	10.47	2.87	9.21	7.12	3.30	4.96	3.97	13.17	4.79	1.54	13.36	4.82	4.32	4.35
63	I9_SR1	SilentIntronRegion	0	10.14	21.45	8.67	25.71	12.08	5.13	11.47	14.35	5.20	6.22	4.63	9.56	3.38	3.43	3.93	3.33	9.65	6.80	3.04	16.17	3.83	6.86	5.27
64	E10_Aa	NovelBoundary	0	19.56	37.56	9.22	9.79	20.97	2.10	36.43	18.65	3.82	2.82	2.00	0.00	6.82	4.12	4.57	11.79	3.93	3.81	4.61	5.62	0.00	2.82	0.00
65	ER10a	ExonRegion	0	24.58	26.79	6.54	31.48	14.72	5.99	18.83	18.62	11.72	17.94	12.87	13.54	9.55	7.50	7.57	8.20	7.56	13.47	3.51	13.45	3.05	8.91	13.30
66	E10_Ab	KnownBoundary	0	16.60	11.84	3.02	31.40	8.40	13.57	16.65	24.19	9.40	17.08	17.48	11.10	15.10	14.48	0.00	19.23	8.79	22.88	4.14	15.21	11.43	9.31	11.18
67	ER10b	ExonRegion	0	86.80	137.88	89.84	123.59	79.41	85.65	113.17	97.25	76.47	98.03	276.07	204.23	127.70	159.83	85.85	129.53	203.62	215.57	94.47	140.57	136.90	134.20	122.22
68	E10_Da	NovelBoundary	1	61.34	18.55	6.74	3.03	16.04	0.00	31.84	14.99	3.15	11.93	0.00	0.00	34.74	11.65	13.97	20.59	13.65	11.90	4.42	5.69	5.75	2.51	20.40
69	E10a_E11a	KnownJunction	0	334.28	314.15	115.73	155.76	261.55	202.55	290.63	118.91	108.71	130.90	343.24	197.91	199.34	192.36	112.62	229.77	272.28	387.96	188.15	196.61	188.92	229.07	197.62
70	E11_Aa	NovelBoundary	0	21.86	20.79	1.36	12.59	15.03	7.89	24.16	19.76	9.90	18.10	21.64	12.60	13.31	21.90	4.45	21.62	20.94	20.81	3.76	11.95	0.00	7.84	12.21
71	ER11a	ExonRegion	0	143.72	182.42	83.27	103.91	119.04	98.05	129.67	82.98	59.37	84.97	210.80	188.51	131.24	205.24	97.50	148.43	173.22	227.56	129.40	150.44	143.66	120.40	145.04
72	E11a_E12a	KnownJunction	0	7.19	82.42	53.28	92.06	48.64	35.09	62.84	76.81	47.86	53.51	184.26	104.73	121.91	166.99	94.20	80.24	122.58	175.76	85.74	145.03	86.43	71.34	95.35
73	E12_Aa	NovelBoundary	0	0.00	8.02	1.57	12.92	16.38	2.38	6.76	8.75	1.79	6.18	4.69	12.30	13.64	4.53	5.44	7.26	8.70	23.63	0.00	6.52	0.00	2.63	8.37
74	ER12a	ExonRegion	0	32.72	95.36	57.10	100.60	50.12	58.53	64.02	90.63	51.91	74.27	178.14	113.50	71.11	156.49	90.49	84.99	147.47	196.61	98.83	130.13	103.28	90.27	99.05
75	E12_Da	KnownBoundary	1	96.39	151.42	67.71	126.72	76.40	113.68	93.93	110.49	64.06	99.52	229.90	141.35	47.07	178.70	118.18	141.24	183.64	255.44	152.47	148.80	127.88	141.08	161.17
76	ER12b	ExonRegion	0	58.84	108.25	53.45	84.69	95.74	92.56	85.86	64.05	51.52	62.47	174.48	97.06	98.16	179.39	68.92	104.54	132.00	190.70	107.64	122.76	95.40	79.22	99.13
77	E12_Db	NovelBoundary	0	3.33	15.06	3.25	10.06	4.33	0.00	14.84	18.69	3.59	9.64	11.63	13.95	0.00	26.02	10.38	4.10	21.88	36.15	3.95	5.43	2.97	0.00	16.30
78	E12b_E13a	KnownJunction	1	63.49	93.80	60.29	91.56	114.01	141.45	105.73	73.97	49.85	52.46	148.56	75.77	59.74	188.89	37.09	79.04	152.78	125.06	89.98	154.49	76.23	85.11	73.75
79	I12	Intron	0	3.95	10.96	5.30	4.63	11.93	7.41	9.88	9.34	7.82	5.49	9.82	9.66	11.15	9.48	5.22	13.56	15.74	8.19	6.60	10.37	3.43	6.47	8.22
80	I12_SR1	SilentIntronRegion	0	3.97	11.01	5.32	4.65	11.98	7.44	9.92	9.38	7.85	5.51	9.86	9.70	11.20	9.52	5.24	13.61	15.80	8.22	6.63	10.40	3.44	6.50	8.25
81	E13_Aa	NovelBoundary	0	10.37	27.69	1.30	10.75	12.05	2.50	8.66	20.21	12.64	11.55	19.58	6.15	6.66	11.77	9.64	3.76	23.38	7.59	12.42	21.73	2.53	8.51	16.99
82	ER13a	ExonRegion	0	56.73	124.05	47.02	77.74	120.00	120.19	106.46	76.16	43.47	61.91	146.77	100.90	67.29	188.79	80.60	99.44	146.67	100.42	92.44	125.16	77.80	87.15	76.54
83	E13_Da	KnownBoundary	0	80.76	177.86	40.33	71.15	142.36	120.39	128.56	80.34	46.06	68.98	139.56	127.84	102.27	175.70	68.85	91.86	137.73	88.25	104.94	103.55	76.79	98.83	67.95
84	ER13b	ExonRegion	0	93.36	219.81	74.10	125.18	133.99	97.64	124.52	99.64	51.88	94.59	149.40	142.28	93.67	134.03	92.63	82.79	101.19	79.74	67.41	92.73	47.18	108.08	71.91
85	E13_Db	KnownBoundary	1	69.49	161.75	23.54	46.38	81.58	20.16	69.34	44.32	9.03	48.38	12.32	71.87	33.44	12.24	22.99	7.69	8.70	0.00	0.00	33.05	0.00	14.82	0.00
86	ER13c	ExonRegion	1	27.11	63.82	6.56	14.63	42.30	7.42	21.91	20.37	2.23	18.46	4.23	57.52	8.15	10.94	6.49	2.19	2.20	0.00	0.00	12.87	0.00	5.85	0.00
87	ER13d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.73	0.00	3.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00