Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SEPT3 Gene 0 72.47 600.55 468.31 292.25 258.23 800.25 277.66 552.17 706.17 410.19 4.17 24.69 0.74 1.25 0.99 1.09 2.54 755.18 436.76 438.53 11.15 58.69 72.86 2 449288 Transcript 0 0.00 4.83 0.90 1.83 0.22 1.65 2.03 1.68 0.45 0.84 0.00 0.29 0.00 0.00 0.17 0.00 0.00 3.01 2.82 2.09 0.00 0.00 0.48 3 396426 Transcript 0 0.00 1.13 0.00 0.00 0.00 9.88 1.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.93 13.01 4.67 0.00 0.00 0.16 4 406029 Transcript 0 0.00 5.85 1.83 0.00 0.00 4.83 1.94 4.39 10.62 4.35 0.00 6.15 0.00 0.00 0.00 0.00 0.00 3.86 4.52 11.82 0.00 3.12 0.00 5 328414 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 396425 Transcript 0 57.47 653.66 458.86 293.98 287.25 924.44 360.21 543.15 779.39 413.32 4.40 25.87 1.11 1.37 1.01 1.57 3.29 848.72 483.20 528.38 10.78 70.14 78.51 7 396417 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 291236 Transcript 0 0.53 4.45 5.36 3.41 1.51 13.75 6.27 7.67 15.21 13.23 0.12 0.27 0.00 0.00 0.00 0.00 0.00 27.24 14.53 14.38 0.14 1.30 2.20 9 460267 Transcript 0 3.49 26.60 23.00 14.86 22.47 24.81 21.04 25.73 28.49 20.99 0.01 0.57 0.00 0.00 0.00 0.00 0.00 37.80 15.94 42.27 1.03 2.34 3.30 10 IG31_AR1 ActiveIntergenicRegion 0 1.24 5.66 11.16 16.04 8.61 8.58 7.72 10.11 8.50 21.93 0.00 0.00 1.08 0.00 0.00 0.00 0.00 10.60 20.26 14.33 0.00 0.00 0.67 11 ER1a ExonRegion 0 0.00 0.32 1.79 3.65 0.44 3.30 1.85 3.37 0.90 1.68 0.00 0.58 0.00 0.00 0.33 0.00 0.00 4.40 1.21 4.17 0.00 0.00 0.96 12 E1a_E4b KnownJunction 0 0.00 9.34 0.00 0.00 0.00 0.00 2.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 4.42 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 1.13 0.00 0.00 0.00 9.88 1.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.93 13.01 4.67 0.00 0.00 0.16 14 E2_Ab KnownBoundary 0 0.00 5.26 0.00 0.00 0.00 26.46 2.25 2.18 2.58 4.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.49 30.21 9.52 0.00 0.00 0.00 15 ER2b ExonRegion 0 0.00 2.03 0.37 0.17 1.66 15.56 0.37 0.00 0.96 2.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.23 20.70 2.49 0.00 0.00 1.90 16 E2_Ac KnownBoundary 0 0.00 0.00 1.57 0.00 0.00 0.00 0.00 0.00 3.39 3.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 17 E2_Ad KnownBoundary 0 0.00 0.00 1.83 3.56 3.74 17.15 0.00 0.00 16.23 13.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.61 4.80 6.14 0.00 0.00 3.50 18 ER2c ExonRegion 0 0.00 0.00 1.23 1.36 0.00 21.48 1.13 0.49 13.06 15.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.78 5.46 6.38 0.00 0.89 4.61 19 ER2d ExonRegion 0 6.82 65.25 34.16 17.46 15.22 178.53 35.85 53.78 128.93 104.44 0.47 2.80 0.00 0.28 1.28 0.00 0.00 224.50 143.18 140.33 4.20 6.83 27.21 20 E2a_E4b KnownJunction 0 14.30 90.58 91.13 55.57 36.42 255.48 81.79 126.38 235.41 188.01 2.68 6.00 0.00 0.00 0.00 0.00 0.00 445.54 265.98 169.25 2.41 21.19 38.24 21 E2a_E5b KnownJunction 0 0.00 5.85 1.83 0.00 0.00 4.83 1.94 4.39 10.62 4.35 0.00 6.15 0.00 0.00 0.00 0.00 0.00 3.86 4.52 11.82 0.00 3.12 0.00 22 ER2e ExonRegion 0 7.85 80.33 72.81 38.33 18.62 188.35 58.14 109.54 188.15 159.85 3.70 5.23 0.00 1.49 0.00 0.00 0.00 362.70 187.67 149.11 3.40 19.10 35.61 23 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 2.27 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 2.43 0.00 0.00 0.00 24 ER4a ExonRegion 0 1.06 8.90 10.72 6.81 3.01 27.51 10.26 15.34 30.41 25.81 0.24 0.54 0.00 0.00 0.00 0.00 0.00 52.89 29.07 26.33 0.28 2.60 4.40 25 ER4b ExonRegion 0 6.53 134.19 178.75 122.40 54.22 233.33 76.89 264.37 465.04 328.31 2.88 8.86 0.00 0.71 0.77 0.00 0.88 669.78 296.61 350.57 6.97 31.00 51.06 26 E4a_E5b KnownJunction 0 6.59 274.10 199.99 171.14 146.26 621.74 152.67 412.42 560.73 437.34 5.37 13.95 0.00 0.00 0.00 0.00 0.00 778.20 417.42 358.45 14.64 64.91 84.85 27 E4a_E6a NovelJunction 0 0.00 9.08 14.81 8.56 12.39 45.09 24.82 13.31 33.10 31.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.16 31.72 17.58 0.00 0.00 3.16 28 E4a_E7a KnownJunction 0 0.00 0.00 0.00 4.10 0.00 0.00 2.03 0.00 2.92 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.30 0.00 23.33 0.00 0.00 0.00 29 ER5a ExonRegion 0 3.49 26.60 23.00 14.86 22.47 24.81 21.04 25.73 28.49 20.99 0.01 0.57 0.00 0.00 0.00 0.00 0.00 37.80 15.94 42.27 1.03 2.34 3.30 30 E5_Ab KnownBoundary 0 0.00 6.51 15.14 16.75 18.59 8.23 10.51 24.07 25.67 37.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.69 21.93 46.79 0.00 0.00 0.00 31 ER5b ExonRegion 0 17.06 339.26 273.13 182.35 110.90 530.41 150.54 404.09 611.37 414.28 5.29 17.69 0.00 2.32 0.00 1.00 0.00 857.76 362.46 436.53 19.25 38.79 70.34 32 E5a_E6a KnownJunction 0 16.15 516.09 373.49 309.65 169.10 763.03 194.89 626.83 855.92 532.89 9.11 40.21 0.00 7.06 0.00 0.00 0.00 1344.87 638.79 643.39 22.49 111.38 59.50 33 E5a_E7a NovelJunction 0 0.00 0.00 2.31 3.73 0.00 4.32 0.00 0.00 0.00 2.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 0.00 24.22 0.00 0.00 0.00 34 ER6a ExonRegion 0 14.22 383.30 310.30 257.00 195.72 795.04 250.28 591.32 786.65 548.84 8.18 25.18 0.00 2.00 2.12 0.29 2.05 1081.07 491.83 494.55 22.33 81.33 85.99 35 E6a_E7a KnownJunction 0 10.74 325.73 301.11 224.38 325.13 834.80 317.57 627.45 819.78 600.66 6.58 33.31 0.00 0.00 4.45 0.00 0.00 1088.03 599.64 468.70 31.44 74.34 114.22 36 ER7a ExonRegion 0 20.32 363.74 322.42 244.36 280.36 637.30 261.03 568.43 842.91 547.56 6.71 40.05 0.00 2.34 2.30 0.83 1.12 1037.89 512.05 502.60 15.33 68.66 106.06 37 E7_Da KnownBoundary 0 45.56 548.26 425.21 359.53 255.35 672.40 282.38 644.21 938.47 601.79 9.58 37.96 0.00 2.47 0.00 4.27 4.77 1169.44 755.13 603.83 5.62 119.41 97.83 38 ER7b ExonRegion 0 19.74 456.77 357.41 301.31 190.32 619.17 224.75 645.78 840.78 622.46 8.31 35.75 0.00 4.87 2.49 3.52 1.32 1106.99 671.07 553.71 14.70 94.71 81.51 39 E7b_E8a KnownJunction 0 16.82 518.59 321.40 314.68 235.48 720.49 250.18 615.82 905.63 611.14 4.69 45.91 0.00 0.00 5.19 0.00 0.00 1149.96 356.43 470.11 27.68 66.13 56.68 40 ER8a ExonRegion 0 23.83 468.61 298.83 275.36 254.78 779.52 241.82 560.02 824.57 558.49 4.37 28.61 0.00 0.49 4.29 0.00 0.00 1166.25 447.20 471.51 18.78 69.57 74.57 41 E8_Db KnownBoundary 0 49.34 645.28 352.32 318.87 359.85 998.40 320.89 597.38 837.58 521.82 14.95 24.01 0.00 2.47 0.00 0.00 0.00 1208.78 619.69 606.64 8.90 58.60 122.84 42 E8b_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER8b ExonRegion 0 34.50 540.73 300.15 290.02 285.77 897.64 262.54 559.15 810.42 517.48 9.86 18.18 0.00 2.11 2.90 0.00 0.00 1186.07 511.09 526.49 11.46 65.21 96.18 44 ER8c ExonRegion 0 38.55 565.99 333.46 287.24 328.69 927.44 307.51 659.02 866.16 578.22 7.78 32.62 0.00 1.73 1.82 0.00 1.85 1304.91 528.09 527.35 16.25 73.67 98.20 45 E8c_E9a KnownJunction 0 78.68 927.33 450.43 350.67 457.05 1472.73 463.13 849.62 1130.46 758.29 2.26 57.02 0.00 3.00 8.90 3.76 3.74 1653.29 933.86 637.51 15.75 115.61 153.23 46 E9_Ab NovelBoundary 0 26.23 530.63 294.93 185.59 231.83 889.89 258.31 445.57 626.53 391.75 2.11 45.31 0.00 2.41 0.00 0.00 0.00 916.87 700.73 301.56 7.48 55.91 77.08 47 ER9a ExonRegion 0 50.37 787.20 444.81 315.37 412.07 1340.51 388.32 734.42 1015.39 681.26 2.13 67.97 0.00 3.25 5.80 0.00 2.97 1552.11 881.39 597.44 14.10 99.18 140.96 48 ER9b ExonRegion 0 23.26 690.33 455.87 335.54 360.39 1186.49 411.14 683.16 964.05 628.00 9.93 52.56 0.00 1.02 2.60 4.18 0.00 1327.39 726.15 589.46 16.94 63.84 102.51 49 E9a_E10a KnownJunction 0 20.45 478.07 399.19 364.69 393.89 985.68 372.78 691.52 926.12 620.94 3.95 16.81 0.00 0.00 0.00 4.27 0.00 1229.38 650.28 664.93 32.87 57.87 82.03 50 ER10a ExonRegion 0 20.87 385.75 385.49 313.29 230.84 849.97 281.58 627.03 859.54 529.42 6.61 42.30 0.00 0.68 0.81 0.95 1.45 1403.44 532.18 547.13 14.30 64.84 75.62 51 E10a_E11a KnownJunction 0 20.37 469.13 466.19 354.53 267.66 726.12 220.55 711.48 967.03 552.63 6.63 61.52 0.00 2.83 4.45 0.00 0.00 1511.85 582.51 573.59 25.33 84.56 116.69 52 ER11a ExonRegion 0 20.47 433.50 458.31 334.72 222.19 857.72 218.66 703.68 1003.36 606.40 3.42 50.04 0.00 0.00 2.85 6.97 0.57 1620.58 711.81 558.63 19.24 55.13 105.66 53 E11a_E12a KnownJunction 0 36.97 573.98 424.53 312.11 292.53 1076.94 347.25 624.16 876.93 558.06 2.63 36.91 0.00 0.00 4.45 10.60 0.00 1259.19 860.64 622.11 11.55 65.27 124.54 54 ER12a ExonRegion 0 23.46 380.63 335.46 257.27 166.12 721.99 231.09 558.07 839.39 536.85 0.88 32.98 0.00 1.88 0.90 0.98 5.30 881.73 519.65 552.69 15.80 47.41 77.16 55 E12_Da KnownBoundary 0 25.93 523.13 280.27 312.38 121.31 790.68 363.68 488.66 753.15 411.12 5.26 30.91 0.00 2.12 0.00 0.00 0.00 1130.52 467.50 578.90 15.94 42.74 44.73 56 E12a_E12b KnownJunction 0 0.00 111.95 62.92 81.61 63.84 137.65 35.90 158.87 191.29 163.97 0.00 5.25 0.00 0.00 0.00 0.00 0.00 74.24 62.87 19.75 0.00 17.21 15.96 57 ER12b ExonRegion 0 21.95 410.65 268.27 215.20 112.83 679.90 269.35 365.93 657.52 380.48 2.26 21.94 0.00 4.02 0.00 0.00 0.90 1014.60 387.97 495.17 13.86 50.75 76.05 58 E12_Db KnownBoundary 0 15.71 429.66 316.67 209.60 208.15 749.80 299.64 390.29 738.91 406.05 2.11 6.30 0.00 0.00 0.00 0.00 7.29 1260.31 441.90 465.51 5.56 33.98 120.62 59 ER12c ExonRegion 0 57.47 653.66 458.86 293.98 287.25 924.44 360.21 543.15 779.39 413.32 4.40 25.87 1.11 1.37 1.01 1.57 3.29 848.72 483.20 528.38 10.78 70.14 78.51 60 E12_Ab KnownBoundary 0 65.57 656.73 650.48 395.22 189.05 882.79 231.10 560.99 759.37 398.60 2.37 48.77 0.00 4.94 0.00 0.00 3.65 1205.92 438.32 499.58 24.28 50.95 64.28 61 ER12d ExonRegion 0 228.74 1333.25 1049.71 599.85 499.51 1513.76 469.85 1145.64 1227.63 727.86 6.20 43.17 0.92 1.61 0.94 0.45 4.27 1111.09 740.99 641.29 20.78 98.02 132.31 62 E12_Dc KnownBoundary 0 395.11 2259.53 1827.55 1131.92 695.25 1977.90 583.43 1967.82 1843.53 1159.60 5.05 69.77 0.00 2.12 0.00 4.36 8.60 1712.11 1128.88 811.88 28.17 202.93 217.42 63 ER12e ExonRegion 0 143.17 842.04 890.53 499.00 393.26 934.11 259.28 849.65 864.08 510.04 5.95 30.34 2.16 1.42 1.83 1.59 5.30 560.32 472.16 448.90 9.40 66.01 78.64 64 E12_Dd KnownBoundary 0 451.78 1276.35 902.54 500.57 710.27 1307.83 331.62 753.05 713.56 387.16 10.00 6.30 0.00 5.36 4.45 0.00 4.77 530.40 715.79 390.53 17.48 89.22 58.99 65 ER12f ExonRegion 0 76.29 396.81 361.66 219.91 235.59 389.39 105.93 310.52 323.60 179.36 1.85 8.94 1.27 0.90 0.34 1.96 0.60 159.30 181.38 158.37 3.53 26.24 19.44