Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PATZ1	Gene	0	67.07	171.10	120.92	123.14	88.91	108.51	64.39	106.61	87.03	137.48	110.09	24.63	29.52	104.03	85.85	97.16	73.81	184.11	129.84	112.88	35.77	26.10	28.44
2	405309	Transcript	0	14.15	0.00	30.07	47.78	24.96	17.89	6.18	33.60	35.97	46.79	23.32	18.61	6.17	20.07	4.45	19.99	13.09	52.81	56.75	44.04	0.00	3.00	15.79
3	351933	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	266269	Transcript	0	6.20	8.75	6.25	12.72	16.26	23.83	5.76	18.94	29.85	9.61	18.92	1.01	4.57	10.93	6.25	14.83	9.05	19.76	16.19	10.48	7.82	3.15	3.14
5	215919	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	440325	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	465287	Transcript	0	3.08	2.10	1.21	2.79	3.03	3.65	3.05	3.28	1.90	1.82	4.31	0.00	0.00	1.56	2.72	1.48	0.55	5.20	3.99	5.18	1.31	0.35	0.98
8	494109	Transcript	0	9.03	9.30	9.97	9.03	8.04	11.44	9.73	9.04	7.70	4.44	10.11	3.44	6.03	10.63	8.24	14.58	11.02	14.94	9.75	20.90	3.56	0.65	3.40
9	IG3	Intergenic	0	0.25	0.97	1.74	0.48	1.28	5.68	1.10	3.07	1.31	3.67	13.35	2.64	1.38	11.27	5.12	9.90	11.01	12.04	11.37	6.58	1.05	2.73	1.75
10	IG3_AR1	ActiveIntergenicRegion	0	0.00	0.00	2.64	0.42	1.10	2.65	0.00	4.79	2.28	4.59	22.73	3.84	2.39	18.19	7.47	15.93	17.71	20.10	15.11	8.33	1.36	3.44	3.03
11	ER1a	ExonRegion	0	0.11	3.39	8.28	3.05	1.62	9.31	1.49	4.88	6.67	22.40	28.79	4.64	0.51	36.51	16.66	19.22	20.07	33.91	20.54	20.01	17.22	2.53	9.01
12	E1_Ab	KnownBoundary	1	7.04	20.52	24.54	19.98	7.98	15.79	3.89	8.75	25.72	67.80	46.27	11.85	6.49	78.64	18.30	26.66	24.22	145.17	45.18	56.50	30.64	2.63	19.72
13	ER1b	ExonRegion	0	15.82	63.56	90.82	82.86	29.25	86.32	34.60	85.13	79.30	144.75	143.93	24.10	39.13	163.48	99.53	127.32	103.55	256.62	139.55	136.14	57.83	28.38	35.60
14	E1_Ac	KnownBoundary	0	24.82	143.20	116.88	90.70	80.39	189.32	75.83	107.45	109.63	192.68	198.95	18.76	42.04	191.30	140.68	159.10	166.53	310.94	189.46	168.29	68.82	23.27	43.19
15	ER1c	ExonRegion	0	49.71	138.54	147.64	160.42	82.26	156.43	75.06	156.36	132.85	225.01	235.63	38.46	62.44	214.48	170.35	189.82	155.88	424.18	212.43	230.18	74.99	33.46	43.87
16	E1a_E2c	KnownJunction	0	85.13	204.57	216.31	271.69	137.95	280.75	124.98	206.44	200.26	282.27	234.32	88.08	167.85	278.83	294.33	243.78	172.23	504.61	356.34	322.40	79.63	45.80	57.79
17	ER2a	ExonRegion	0	3.08	2.10	1.21	2.79	3.03	3.65	3.05	3.28	1.90	1.82	4.31	0.00	0.00	1.56	2.72	1.48	0.55	5.20	3.99	5.18	1.31	0.35	0.98
18	E2_Ab	KnownBoundary	0	7.19	12.17	5.68	1.70	16.30	23.96	18.77	16.72	4.48	8.89	4.37	0.00	6.98	0.00	0.00	0.00	0.00	30.72	15.44	36.88	3.15	0.00	0.00
19	ER2b	ExonRegion	0	4.02	3.39	4.61	3.99	7.96	12.41	3.54	8.53	9.44	5.83	4.56	0.27	0.40	3.25	3.85	1.48	0.61	12.62	5.94	10.52	1.51	1.33	3.15
20	E2_Ac	KnownBoundary	0	15.41	0.00	2.93	6.29	0.00	2.56	10.73	9.61	7.41	2.58	7.58	0.00	0.00	4.94	0.00	7.86	0.00	5.60	18.17	5.56	6.30	3.12	7.00
21	ER2c	ExonRegion	0	80.93	251.55	228.25	236.69	122.49	238.98	93.35	204.67	210.36	310.52	247.81	67.69	64.69	273.01	225.65	294.19	186.21	561.01	304.08	282.84	88.32	60.69	86.93
22	E2a_E3a	KnownJunction	0	60.46	56.31	47.40	59.53	19.35	46.11	20.80	89.17	63.92	94.39	119.98	30.01	13.80	92.65	147.72	150.39	115.75	106.29	61.46	50.75	26.81	31.96	15.45
23	E2a_E4a	KnownJunction	0	52.97	362.30	216.55	190.72	144.23	275.52	106.21	154.56	181.31	237.08	137.03	54.47	33.44	154.69	78.99	132.02	108.37	447.57	267.21	258.03	97.92	39.74	106.70
24	ER3a	ExonRegion	0	50.87	56.58	70.52	78.58	41.64	66.33	30.80	80.15	59.96	81.69	118.10	28.57	28.60	109.08	114.19	115.31	73.84	105.40	88.14	63.41	21.97	17.34	17.98
25	I3_AR2	ActiveIntronRegion	0	16.47	7.52	0.59	2.13	3.26	2.15	2.94	1.05	1.02	0.40	1.93	0.75	0.00	4.52	2.52	2.20	0.00	1.61	0.00	4.35	0.00	0.00	3.19
26	E4_Aa	NovelBoundary	0	14.00	3.16	24.51	4.86	39.98	6.98	22.70	5.38	2.66	11.68	18.32	0.00	6.66	7.30	5.32	3.25	4.77	14.67	12.71	8.31	0.00	0.00	0.00
27	ER4a	ExonRegion	0	57.32	204.30	188.89	159.92	95.95	138.36	80.65	160.81	159.85	214.38	126.59	37.51	31.22	118.53	85.87	137.29	87.17	381.30	194.96	228.09	68.40	31.47	53.66
28	E4_Da	KnownBoundary	0	13.85	3.35	7.30	3.36	3.23	8.69	17.09	1.85	6.31	5.10	20.53	5.85	6.82	0.00	4.45	7.60	17.11	11.65	4.42	8.56	12.05	2.94	7.94
29	E4a_E5a	KnownJunction	0	5.70	5.13	6.71	15.08	17.40	27.60	4.11	31.79	45.02	10.34	23.64	0.00	6.82	9.42	4.45	24.18	7.11	30.59	23.81	8.25	6.30	2.33	4.35
30	E4a_E5b	KnownJunction	0	14.15	0.00	30.07	47.78	24.96	17.89	6.18	33.60	35.97	46.79	23.32	18.61	6.17	20.07	4.45	19.99	13.09	52.81	56.75	44.04	0.00	3.00	15.79
31	E4a_E6a	KnownJunction	0	56.82	157.74	136.31	127.29	91.60	53.95	82.05	112.99	80.53	169.55	74.12	17.41	19.15	52.27	44.63	121.59	64.33	258.83	146.73	131.61	43.06	16.90	35.60
32	ER4b	ExonRegion	0	9.03	9.30	9.97	9.03	8.04	11.44	9.73	9.04	7.70	4.44	10.11	3.44	6.03	10.63	8.24	14.58	11.02	14.94	9.75	20.90	3.56	0.65	3.40
33	Ix	Intron	0	17.38	19.30	11.81	19.22	23.36	15.18	15.62	14.73	11.26	12.48	13.63	6.93	7.91	10.27	6.71	14.54	10.52	21.24	12.44	20.25	3.91	2.08	4.78
34	Ix_AR2	ActiveIntronRegion	0	15.48	13.01	5.06	11.34	13.06	10.03	16.87	9.63	6.86	7.62	7.00	1.40	3.65	9.38	10.77	14.83	14.27	19.54	5.40	19.42	5.02	0.71	3.45
35	Ix_SR2	SilentIntronRegion	0	12.06	13.53	9.67	22.71	15.31	9.55	12.08	11.15	11.29	12.62	15.15	1.35	7.45	10.33	8.10	9.43	13.01	20.05	10.10	28.76	4.80	2.82	5.11
36	Ix_AR1	ActiveIntronRegion	0	14.74	16.84	6.20	15.75	12.17	11.49	15.70	7.59	9.96	11.71	12.85	2.16	3.36	10.25	7.15	13.34	7.95	24.91	6.04	26.36	4.14	0.86	3.35
37	Ix_SR1	SilentIntronRegion	0	18.73	20.86	13.39	19.61	26.97	16.89	16.10	16.73	11.66	12.79	13.80	8.83	8.95	10.30	6.26	15.52	10.45	20.85	14.20	17.92	3.69	2.24	5.03
38	E5_Aa	NovelBoundary	0	30.89	18.35	7.51	31.93	18.08	41.23	17.44	15.61	16.67	10.02	15.21	6.30	19.48	9.77	6.30	22.39	8.42	26.36	19.20	27.87	0.00	0.00	3.24
39	ER5a	ExonRegion	0	8.24	10.14	10.81	19.27	26.55	35.09	8.69	22.60	43.29	17.12	29.64	3.02	6.89	17.52	13.14	20.31	20.06	27.58	24.76	20.21	17.16	6.28	5.07
40	E5_Ab	KnownBoundary	0	16.82	11.64	11.29	10.72	36.93	36.06	7.46	27.64	40.86	22.91	28.43	0.00	0.00	12.30	4.45	21.96	21.69	29.93	21.37	21.03	19.40	2.57	3.84
41	ER5b	ExonRegion	0	34.07	23.70	39.59	50.10	39.50	75.87	10.50	65.39	65.87	48.97	51.06	6.98	22.67	51.84	24.26	46.52	29.39	91.59	54.37	68.68	24.00	5.79	20.39
42	E5a_E6a	KnownJunction	0	37.04	12.17	45.98	49.64	62.90	82.91	10.78	74.14	67.01	41.66	51.17	5.40	6.49	52.50	25.71	39.90	18.05	76.65	43.67	68.58	29.90	8.88	18.78
43	Ix_SR1	SilentIntronRegion	0	13.99	14.26	11.52	18.57	9.58	14.09	11.09	14.14	8.84	7.71	8.37	0.48	1.57	6.66	7.16	13.49	9.38	20.66	6.77	15.23	3.64	2.49	1.49
44	E6_Aa	NovelBoundary	0	53.27	9.34	11.86	12.05	12.31	23.40	12.85	21.03	11.81	7.25	19.11	0.00	0.00	12.18	4.45	8.03	4.30	17.49	4.05	18.22	0.00	0.00	11.27
45	ER6a	ExonRegion	0	128.40	347.43	203.45	200.71	144.12	201.42	119.68	180.49	157.56	256.70	142.38	24.55	27.05	123.51	91.53	122.67	97.98	353.42	237.82	179.93	61.23	48.51	51.13
46	E6_Da	KnownBoundary	0	225.67	693.69	202.62	224.41	145.16	105.00	147.72	201.39	135.47	270.37	111.45	19.96	35.55	79.40	72.19	72.03	86.21	170.00	111.81	189.64	61.72	36.37	36.28
47	ER6b	ExonRegion	0	199.66	543.65	291.88	303.35	280.43	228.76	175.52	219.06	156.96	247.00	120.84	41.57	42.87	95.99	103.62	100.15	78.57	182.20	219.75	161.39	30.12	51.12	40.18
48	ER6c	ExonRegion	0	4.66	10.98	1.23	3.82	4.82	8.80	4.50	2.42	1.24	1.38	3.48	0.00	0.00	5.85	1.16	0.00	0.00	1.11	0.00	2.98	0.00	0.83	0.00