Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SRRD Gene 0 34.13 65.72 47.85 47.44 41.44 43.24 43.85 41.71 33.10 53.59 85.41 43.49 40.38 86.00 76.48 83.11 70.02 61.05 40.77 45.95 39.97 31.40 30.07 2 215917 Transcript 0 19.79 30.94 30.45 27.51 16.14 13.33 11.61 25.25 27.24 39.78 90.47 26.03 23.17 108.45 87.05 127.54 65.52 59.84 57.14 48.23 37.91 52.93 45.51 3 477945 Transcript 0 0.93 2.75 1.17 6.39 1.00 1.57 6.81 5.65 1.47 6.45 7.93 2.71 0.29 6.36 4.59 5.51 5.43 7.47 9.29 3.90 1.24 1.87 3.55 4 471799 Transcript 0 27.26 69.61 10.05 15.60 24.70 3.64 15.06 17.47 5.33 6.94 6.10 6.31 9.84 6.68 16.07 10.58 5.05 11.42 7.15 12.52 2.87 4.85 6.52 5 ER1a ExonRegion 1 11.11 22.81 4.96 4.96 8.26 12.29 8.48 5.24 7.20 10.14 40.26 3.67 8.90 25.72 24.82 24.08 31.00 11.67 14.34 13.18 26.74 14.68 8.43 6 E1a_E2a KnownJunction 1 22.08 27.63 40.24 35.49 4.24 12.49 8.26 48.63 35.76 54.40 155.83 13.65 54.05 165.76 128.69 109.71 92.01 62.01 70.40 66.15 66.60 66.01 57.36 7 ER2a ExonRegion 1 23.64 33.83 49.34 45.84 25.32 18.70 15.47 38.36 44.77 65.88 135.92 44.56 46.90 195.85 154.05 249.01 98.87 112.13 107.29 82.20 51.49 93.20 82.30 8 E2a_E3a NovelJunction 0 0.00 3.03 0.00 4.00 0.00 2.61 2.30 2.55 1.79 6.26 2.74 6.45 0.00 7.59 0.00 21.62 0.00 5.14 0.00 0.00 0.00 0.00 4.44 9 E2a_E3b KnownJunction 1 19.63 53.61 57.72 51.24 42.87 22.60 25.00 34.01 48.49 68.47 120.35 68.27 6.01 154.92 127.70 254.89 104.07 113.42 93.65 79.64 44.73 90.75 79.47 10 I2_AR1 ActiveIntronRegion 0 2.12 8.13 4.90 6.81 7.26 0.00 11.73 16.54 2.47 5.73 1.93 0.00 0.00 0.00 2.90 0.00 3.30 1.85 3.19 7.29 0.00 0.00 2.94 11 ER3a ExonRegion 0 0.93 2.75 1.17 6.39 1.00 1.57 6.81 5.65 1.47 6.45 7.93 2.71 0.29 6.36 4.59 5.51 5.43 7.47 9.29 3.90 1.24 1.87 3.55 12 E3_Ab KnownBoundary 0 2.96 0.00 0.00 15.15 0.00 2.90 14.62 10.80 4.48 11.79 8.95 0.00 6.66 9.95 9.15 0.00 0.00 12.56 24.00 6.14 0.00 0.00 4.35 13 ER3b ExonRegion 0 42.91 102.74 87.02 97.69 59.06 71.93 75.73 72.90 66.62 114.39 175.55 93.83 79.01 179.46 137.87 160.79 151.11 140.86 83.48 98.98 96.27 63.67 73.40 14 E3_Da NovelBoundary 0 3.04 2.83 6.95 16.18 8.06 0.00 18.15 14.75 6.08 7.71 2.11 0.00 6.66 2.12 0.00 0.00 0.00 10.32 14.02 9.20 5.93 2.88 7.68 15 E3a_E4a KnownJunction 0 63.64 94.26 142.07 112.41 91.00 72.63 76.05 100.80 87.38 170.28 229.58 92.13 76.78 276.77 210.77 207.64 207.20 156.82 82.54 133.84 100.76 84.01 94.16 16 E4_Aa NovelBoundary 0 3.78 3.35 12.27 12.02 15.62 0.00 13.69 15.03 5.47 6.02 1.95 0.00 6.82 2.47 13.35 4.19 4.02 23.17 4.33 3.00 5.19 6.25 4.35 17 ER4a ExonRegion 0 53.49 77.97 124.59 103.29 111.00 86.08 90.63 92.66 77.45 123.24 189.81 103.99 106.92 205.13 167.75 217.57 131.84 158.79 94.82 108.90 108.12 66.21 66.42 18 E4_Da NovelBoundary 0 9.56 9.41 8.46 28.83 0.00 0.00 11.44 2.26 19.79 21.95 2.68 0.00 6.82 12.30 0.00 0.00 0.00 36.93 9.22 17.51 13.65 3.12 3.67 19 E4a_E5a KnownJunction 0 54.23 121.82 153.31 118.20 115.45 120.10 125.42 100.55 73.03 132.99 182.26 141.65 221.74 270.94 238.33 247.29 157.92 178.50 90.17 103.80 87.91 46.78 74.78 20 E4a_E6b NovelJunction 0 0.00 25.32 6.42 10.99 0.00 0.00 0.00 8.67 0.00 2.95 2.68 5.85 0.00 0.00 4.70 0.00 0.00 18.45 4.42 9.59 0.00 2.33 0.00 21 I4 Intron 0 7.18 15.70 8.69 18.05 13.98 5.43 14.66 14.16 11.84 11.26 7.91 7.11 9.97 6.49 7.13 9.97 9.52 21.35 11.92 14.43 9.11 5.61 6.76 22 I4_AR1 ActiveIntronRegion 0 7.00 18.11 7.94 16.07 17.17 5.34 17.98 11.21 13.06 14.60 9.46 8.51 12.01 6.03 6.65 9.27 13.41 21.59 10.70 14.59 12.23 6.99 6.96 23 I4_AR2 ActiveIntronRegion 0 17.88 29.89 5.84 24.80 22.88 14.21 17.61 13.45 12.35 16.36 7.06 15.30 12.43 9.61 12.81 14.22 8.31 33.63 22.51 11.95 7.13 15.35 11.21 24 I4_AR3 ActiveIntronRegion 0 8.98 15.46 6.75 26.20 23.72 0.12 14.89 16.13 7.55 16.85 6.14 17.41 2.61 10.03 0.77 5.48 5.06 16.84 23.01 8.56 6.95 8.52 5.68 25 I4_SR1 SilentIntronRegion 0 6.37 13.39 9.45 18.16 11.10 5.13 12.72 15.71 11.45 8.82 7.30 5.16 9.17 6.31 7.35 10.31 7.87 20.62 11.13 14.95 7.77 3.97 6.40 26 E5_Aa NovelBoundary 0 6.67 15.13 18.98 32.36 3.40 0.00 16.96 20.91 28.53 11.15 7.05 24.61 20.29 4.77 10.88 4.36 9.16 26.36 0.00 9.14 9.08 0.00 4.01 27 ER5a ExonRegion 0 58.16 97.83 117.38 103.32 103.96 99.00 95.15 95.78 76.62 119.88 191.03 88.46 106.33 182.41 174.24 177.77 157.80 138.77 70.45 87.11 81.04 53.94 59.91 28 E5_Da NovelBoundary 0 14.08 37.49 13.10 20.11 20.88 7.78 12.98 17.79 19.50 18.21 7.16 18.46 6.82 14.77 18.54 19.65 13.93 40.62 25.98 8.82 3.09 12.49 4.35 29 E5a_E6b KnownJunction 0 107.87 117.41 122.20 84.87 138.71 113.91 71.28 93.32 68.03 121.52 223.58 127.24 90.25 159.87 197.91 227.21 126.60 101.64 99.11 96.77 41.51 64.48 27.74 30 I5 Intron 0 7.20 14.69 17.07 23.31 18.57 8.05 15.00 16.79 8.61 12.35 9.31 7.90 10.01 11.21 10.76 11.37 13.56 23.04 11.73 12.06 4.99 8.56 7.90 31 I5_SR1 SilentIntronRegion 0 7.24 14.77 17.16 23.43 18.68 8.10 15.09 16.88 8.65 12.41 9.36 7.95 10.04 11.26 10.82 11.43 13.64 23.16 11.80 12.12 5.02 8.61 7.95 32 E6_Aa NovelBoundary 1 535.28 571.08 942.84 1239.97 429.63 252.58 640.76 1239.66 1125.86 1139.00 146.72 238.58 339.43 169.17 201.00 579.51 353.90 1616.06 535.26 566.88 202.14 178.31 551.10 33 ER6a ExonRegion 0 27.26 69.61 10.05 15.60 24.70 3.64 15.06 17.47 5.33 6.94 6.10 6.31 9.84 6.68 16.07 10.58 5.05 11.42 7.15 12.52 2.87 4.85 6.52 34 E6_Ab KnownBoundary 0 33.19 87.62 12.06 24.87 14.01 0.00 12.85 6.98 5.64 4.22 2.68 0.00 5.68 4.59 8.90 0.00 4.58 3.36 8.47 19.62 0.00 7.84 8.11 35 ER6b ExonRegion 0 85.18 168.92 121.67 114.97 95.49 106.24 96.38 106.86 74.13 127.05 213.91 100.92 71.91 203.20 182.52 192.73 163.14 108.48 108.30 100.43 55.39 77.18 41.70 36 E6_Da NovelBoundary 0 56.60 64.20 20.90 15.12 50.17 4.88 20.18 34.17 9.20 28.02 4.63 0.00 6.66 2.47 4.45 3.59 18.33 6.47 0.00 14.70 2.35 2.51 3.67 37 E6a_E7a KnownJunction 0 81.94 152.80 103.72 124.73 79.63 69.96 120.56 100.88 74.74 115.53 197.37 141.80 74.18 207.14 169.48 115.87 168.49 82.82 92.99 69.61 42.07 75.32 24.33 38 I6 Intron 0 18.22 23.57 11.49 15.47 15.06 1.82 10.08 12.80 6.70 15.28 2.56 2.61 4.11 8.89 7.46 7.87 7.65 7.00 11.60 13.39 0.73 0.69 12.64 39 I6_AR1 ActiveIntronRegion 0 18.46 23.87 11.64 15.66 15.26 1.85 10.22 12.95 6.78 15.48 2.59 2.65 4.17 9.01 7.56 7.98 7.73 7.09 11.76 13.55 0.74 0.70 12.81 40 E7_Aa NovelBoundary 0 33.64 44.27 35.60 31.53 46.69 13.57 20.49 34.46 14.67 27.59 16.79 0.00 12.99 21.90 20.89 14.87 8.32 9.29 12.89 9.14 2.78 7.53 3.76 41 ER7a ExonRegion 0 33.76 58.79 32.46 31.54 27.51 46.19 41.85 30.65 20.98 33.17 43.70 32.69 19.42 46.28 49.30 39.32 40.40 22.34 22.50 24.72 11.23 18.28 11.10 42 E7_Da KnownBoundary 0 100.76 66.17 22.18 18.91 26.83 24.87 37.45 18.89 13.05 34.33 34.06 29.86 36.04 11.71 18.91 24.61 22.91 28.64 16.85 28.44 12.54 5.39 40.89 43 ER7b ExonRegion 0 22.51 16.83 0.00 0.00 0.00 0.60 0.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00