Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MFNG Gene 0 77.27 0.82 7.95 14.39 36.31 8.57 8.78 26.06 16.10 6.53 246.22 53.25 60.28 212.28 202.54 182.55 133.45 0.98 2.24 0.14 0.26 2.37 1.38 2 431211 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 356998 Transcript 0 4.23 0.00 0.00 0.00 3.57 0.00 0.00 0.00 0.00 0.00 3.87 11.55 0.00 2.71 5.80 3.96 3.30 0.00 0.00 0.00 0.00 0.00 0.00 4 424765 Transcript 0 1.90 0.03 0.29 0.34 0.13 0.18 0.24 0.81 0.49 0.25 14.03 9.13 2.03 13.16 5.46 14.23 4.24 0.03 0.05 0.00 0.00 0.03 0.10 5 430411 Transcript 0 5.07 0.00 0.00 0.00 0.00 2.28 0.00 1.99 1.38 0.00 21.59 0.00 4.52 22.91 7.61 12.05 7.15 0.00 0.00 0.00 0.00 0.00 0.00 6 438891 Transcript 0 7.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.74 0.00 0.00 15.30 11.50 16.06 29.73 2.45 0.00 0.00 0.00 0.00 0.00 7 450946 Transcript 0 0.00 0.00 0.00 0.68 0.00 0.00 0.00 0.00 0.00 0.00 0.24 0.00 0.00 0.00 0.00 0.37 1.24 0.00 0.00 0.00 0.00 0.00 0.00 8 416983 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 442496 Transcript 0 3.14 0.00 0.25 0.42 1.08 0.61 0.53 0.36 0.26 0.12 6.75 0.39 0.54 5.07 4.63 3.50 8.62 0.00 0.00 0.00 0.00 0.00 0.00 10 436341 Transcript 0 2.76 0.00 0.00 0.38 5.98 0.00 0.99 0.48 0.69 0.95 3.94 2.67 5.03 4.92 6.82 6.06 8.00 0.00 0.00 0.00 0.00 0.00 0.00 11 466943 Transcript 0 17.22 0.01 1.25 3.44 6.43 2.04 2.58 3.11 3.58 2.08 15.93 9.15 12.89 19.92 16.00 18.66 20.82 0.48 0.01 0.00 0.75 0.66 1.50 12 454291 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 489515 Transcript 0 7.02 0.00 1.42 2.12 6.99 1.74 1.08 0.96 2.02 1.44 12.68 6.24 7.06 6.73 17.04 16.12 11.65 0.00 0.01 0.00 0.00 0.27 0.02 14 ER1a ExonRegion 0 0.00 0.00 0.00 0.91 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.00 0.00 2.89 14.18 2.97 5.87 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1b ExonRegion 0 1.06 0.00 0.00 1.36 4.01 0.00 0.00 0.00 0.62 0.00 5.15 0.00 0.00 4.33 29.50 2.97 6.60 0.00 0.00 0.00 0.00 0.00 0.00 16 ER1c ExonRegion 1 2.38 0.00 0.00 1.36 5.35 0.00 0.00 0.43 1.24 0.00 5.80 0.00 0.00 5.28 42.79 2.97 6.60 0.00 0.00 0.00 0.00 0.00 0.00 17 ER1d ExonRegion 1 4.23 0.41 0.98 1.36 5.35 0.00 0.00 6.57 3.46 0.23 8.89 0.00 0.94 10.39 85.30 7.73 6.60 0.00 0.00 0.00 0.00 1.67 0.00 18 ER1e ExonRegion 1 40.30 0.72 4.55 7.58 13.47 6.98 2.87 14.24 7.04 4.08 157.03 9.67 9.81 67.25 111.11 106.68 84.00 0.09 0.00 0.00 0.00 1.12 1.06 19 E1_Af KnownBoundary 1 12.97 0.00 2.93 4.79 4.33 2.90 0.00 31.13 11.98 8.19 405.58 20.41 33.44 67.40 117.44 51.70 207.11 0.00 0.00 0.00 0.00 3.12 0.00 20 ER1f ExonRegion 0 38.15 0.63 6.61 11.16 21.31 8.26 8.74 27.14 13.37 6.17 354.56 34.37 39.93 252.25 235.15 264.59 192.03 1.79 4.28 0.70 0.00 3.62 0.97 21 E1a_E5b KnownJunction 0 164.77 2.43 3.43 8.42 22.92 29.13 10.29 31.75 20.72 11.63 442.06 166.25 79.70 280.71 285.19 265.57 219.26 2.24 3.76 0.00 0.00 7.72 0.00 22 E1a_E6b KnownJunction 0 7.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.74 0.00 0.00 15.30 11.50 16.06 29.73 2.45 0.00 0.00 0.00 0.00 0.00 23 E1b_E5b KnownJunction 0 3.48 0.00 0.00 0.00 0.00 2.73 0.00 2.26 1.53 0.00 21.64 0.00 5.68 19.60 4.45 10.94 4.39 0.00 0.00 0.00 0.00 0.00 0.00 24 E1b_E6b NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.66 0.00 14.09 3.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER1g ExonRegion 0 6.65 0.00 0.00 0.00 0.00 1.83 0.00 1.73 1.24 0.00 21.54 0.00 3.35 26.22 10.78 13.16 9.90 0.00 0.00 0.00 0.00 0.00 0.00 26 ER2a ExonRegion 0 8.22 0.00 1.01 1.68 2.97 1.52 1.47 1.43 1.02 0.47 16.61 0.00 2.14 9.45 11.70 13.99 20.99 0.00 0.00 0.00 0.00 0.00 0.00 27 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER3a ExonRegion 0 4.34 0.00 0.00 0.01 1.35 0.93 0.67 0.00 0.00 0.00 5.97 1.54 0.00 10.82 6.81 0.03 8.99 0.00 0.00 0.00 0.00 0.00 0.00 29 E3a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.42 0.00 0.00 0.00 0.00 0.00 4.49 0.00 0.00 0.00 0.00 0.00 0.00 30 ER4a ExonRegion 0 5.52 0.00 0.00 0.76 11.95 0.00 1.97 0.96 1.37 1.91 7.89 5.34 10.06 9.84 13.64 12.13 16.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER5a ExonRegion 0 17.22 0.01 1.25 3.44 6.43 2.04 2.58 3.11 3.58 2.08 15.93 9.15 12.89 19.92 16.00 18.66 20.82 0.48 0.01 0.00 0.75 0.66 1.50 33 E5_Ab KnownBoundary 0 16.67 0.00 0.00 6.96 12.14 7.50 4.50 1.85 6.83 0.00 11.69 6.30 6.82 14.95 19.66 23.58 26.55 0.00 0.00 0.00 0.00 2.63 0.00 34 ER5b ExonRegion 0 119.14 2.20 7.81 15.25 18.28 19.48 11.75 44.72 33.53 13.88 455.16 120.32 134.94 352.26 258.88 319.63 231.75 0.89 3.45 0.00 0.00 8.68 5.45 35 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.32 5.70 0.00 6.77 0.00 10.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E5a_E6b KnownJunction 0 165.29 0.00 12.95 22.84 12.48 16.98 21.29 55.90 36.20 12.49 524.66 117.94 128.73 375.54 334.63 442.11 231.98 1.62 3.95 0.00 0.00 0.00 3.50 37 ER6a ExonRegion 0 3.81 0.07 0.57 0.68 0.27 0.37 0.49 1.61 0.99 0.50 20.75 12.56 4.06 19.54 10.93 18.03 8.47 0.06 0.11 0.00 0.00 0.07 0.20 38 E6_Da NovelBoundary 1 94.02 0.00 16.79 26.40 8.32 0.00 19.43 44.32 25.23 12.52 374.31 92.88 157.13 286.07 330.80 429.63 139.13 2.11 3.86 0.00 0.00 0.00 0.00 39 ER6b ExonRegion 0 119.79 0.31 16.42 23.65 7.63 9.99 18.80 52.98 32.98 14.51 510.09 100.88 146.56 417.89 363.96 467.07 214.39 1.85 5.57 0.00 0.00 0.42 1.62 40 ER6c ExonRegion 0 87.77 2.84 19.46 22.19 20.78 2.89 13.69 52.82 31.66 14.00 567.25 135.68 173.81 403.50 413.00 408.89 238.20 2.09 9.56 0.00 0.00 3.28 4.19 41 E6_Db NovelBoundary 0 69.57 0.00 10.67 13.35 22.07 2.50 5.61 36.31 17.77 9.91 379.15 83.73 77.11 207.08 190.62 187.22 198.32 1.91 0.00 0.00 0.00 0.00 10.84 42 E6c_E7a KnownJunction 0 93.79 0.00 8.84 28.87 70.54 13.34 18.28 40.21 26.82 14.37 612.21 140.90 215.08 460.48 437.85 341.28 310.52 3.48 4.33 0.00 0.00 3.12 3.84 43 E6d_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER6d ExonRegion 0 83.90 1.02 13.04 22.49 52.56 5.89 9.08 43.71 25.50 13.27 611.21 153.08 174.20 421.92 355.61 320.99 293.31 3.17 5.69 0.00 0.00 2.08 8.39 45 ER6e ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.48 0.00 0.00 0.00 0.00 0.74 2.48 0.00 0.00 0.00 0.00 0.00 0.00 46 ER7a ExonRegion 0 102.40 0.05 15.11 26.11 48.47 13.85 11.81 37.13 32.23 12.08 492.04 106.05 145.61 442.54 351.18 333.36 221.62 2.40 2.97 0.00 0.00 3.19 4.59 47 E7_Da KnownBoundary 0 109.50 0.00 27.88 21.98 26.99 24.19 19.96 54.46 36.72 16.41 442.48 132.34 260.21 486.02 410.90 364.86 156.80 4.89 0.00 0.00 0.00 0.00 7.68 48 ER7b ExonRegion 0 83.05 3.04 21.07 20.85 46.65 32.54 18.44 45.66 26.47 9.91 476.50 128.98 182.00 348.51 415.31 332.26 247.81 3.23 0.00 0.00 0.00 1.68 2.41 49 E7b_E8a KnownJunction 0 61.64 0.00 6.24 27.54 52.38 22.26 19.34 53.19 28.96 7.31 358.04 121.39 118.34 367.12 315.47 279.33 223.00 0.00 0.00 0.00 0.00 9.00 4.35 50 ER8a ExonRegion 0 77.87 1.47 10.22 21.25 55.48 11.81 20.68 50.41 31.42 8.79 431.71 107.58 136.50 372.68 318.94 248.45 217.78 1.63 1.89 0.00 0.00 4.87 7.68 51 E8_Da NovelBoundary 0 6.67 0.00 0.00 0.00 19.86 5.45 4.06 0.00 0.00 0.00 4.90 0.00 0.00 11.65 0.00 7.86 4.77 0.00 0.00 0.00 0.00 0.00 0.00 52 E8a_E9a KnownJunction 0 155.66 3.03 19.01 19.71 69.52 28.11 27.38 51.71 29.92 8.84 463.91 114.79 113.63 390.96 300.51 328.20 219.73 0.00 0.00 0.00 0.00 0.00 0.00 53 ER9a ExonRegion 0 122.55 2.65 20.83 23.08 53.63 12.84 18.49 34.64 28.89 10.64 397.89 117.36 173.63 397.14 321.76 346.97 255.30 1.51 0.00 0.00 1.04 2.26 1.86 54 E9_Da KnownBoundary 0 107.72 3.35 17.74 12.45 58.66 2.90 10.07 32.08 18.87 3.95 300.50 71.12 124.67 280.54 288.03 245.83 191.30 0.00 0.00 0.00 0.00 9.06 0.00 55 E9_Ab KnownBoundary 0 10.74 0.00 0.00 0.00 0.00 0.00 0.00 2.55 6.66 2.98 76.49 0.00 7.95 8.30 12.49 41.87 51.05 0.00 0.00 0.00 0.00 0.00 0.00 56 E9_Db KnownBoundary 0 64.83 0.00 1.36 5.59 26.57 4.66 1.81 26.33 9.23 1.40 149.99 26.71 26.78 48.97 62.30 92.80 116.50 0.00 0.00 0.00 0.00 2.45 4.35 57 ER9b ExonRegion 0 100.89 2.52 10.91 17.52 53.39 11.00 9.65 41.89 24.58 5.30 386.49 62.88 96.03 341.61 283.49 278.11 252.28 0.00 0.76 0.00 0.73 4.17 2.80 58 ER9c ExonRegion 0 124.87 2.03 12.25 14.99 53.51 16.50 10.59 41.48 28.41 3.44 419.44 64.94 79.73 341.07 275.62 288.30 247.57 0.00 3.19 0.00 0.00 4.17 2.94 59 ER9d ExonRegion 0 134.09 1.79 8.31 14.11 57.34 25.46 15.19 35.31 22.72 5.19 415.88 101.62 93.25 359.38 268.62 307.24 234.62 0.00 5.43 0.00 0.00 2.12 6.51 60 E9c_E10b KnownJunction 0 121.28 0.00 15.46 13.48 74.36 33.22 26.76 26.99 20.49 6.07 337.19 86.88 124.18 372.65 267.14 266.77 189.15 0.00 3.76 0.00 0.00 2.33 4.35 61 E9c_E11a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 5.79 0.00 2.55 0.00 1.02 25.32 6.30 0.00 11.83 15.20 30.68 22.53 0.00 0.00 0.00 0.00 0.00 0.00 62 ER10a ExonRegion 0 14.03 0.00 0.06 2.27 5.32 0.63 2.15 1.91 2.45 1.37 13.10 6.18 7.31 13.45 9.60 16.10 13.94 0.00 0.02 0.00 0.00 0.55 0.04 63 E10_Ab KnownBoundary 0 19.26 0.00 0.00 0.00 8.66 0.00 0.00 7.35 5.15 0.00 20.06 0.00 6.66 14.77 5.56 16.49 13.65 0.00 0.00 0.00 0.00 0.00 0.00 64 ER10b ExonRegion 0 148.45 1.22 22.27 21.71 69.35 17.43 15.05 39.06 21.59 9.00 402.32 115.47 106.82 437.82 327.19 368.51 234.60 0.85 3.49 0.00 0.00 5.42 3.83 65 E10a_E11a KnownJunction 0 202.04 0.00 26.11 28.97 88.88 10.62 11.70 42.76 15.13 7.20 428.69 155.60 127.75 477.25 451.45 441.25 212.72 2.32 4.24 0.00 0.00 7.53 3.24 66 E11_Aa NovelBoundary 0 73.79 0.00 1.69 7.19 15.87 0.00 0.00 2.55 1.19 6.42 25.01 20.26 0.00 10.54 27.07 30.59 22.07 0.00 0.00 0.00 0.00 2.63 0.00 67 ER11a ExonRegion 0 160.49 2.29 11.50 16.57 68.69 8.86 11.98 36.34 18.65 8.39 396.38 68.44 93.21 346.23 286.23 303.63 228.32 1.95 2.43 0.00 0.00 3.24 0.23 68 E11_Da KnownBoundary 0 207.15 6.71 8.10 12.25 85.40 5.79 16.43 22.80 36.98 12.30 356.67 116.89 81.00 334.28 332.28 276.42 171.95 2.11 0.00 0.00 0.00 5.20 0.00 69 E11a_E11b KnownJunction 1 0.00 0.00 2.78 1.96 8.66 2.84 0.00 0.00 1.59 1.50 12.27 6.30 6.82 0.00 24.48 16.15 9.35 0.00 0.00 0.00 0.00 0.00 0.00 70 ER11b ExonRegion 0 160.39 0.83 8.18 24.42 54.46 12.00 12.09 27.40 25.39 9.50 315.89 67.84 62.17 345.73 299.35 235.24 173.06 0.82 4.60 0.00 0.00 3.98 0.00 71 E11_Db KnownBoundary 0 203.30 0.00 15.88 12.85 88.62 25.78 8.30 25.10 22.11 10.23 391.68 115.24 109.73 344.05 325.86 303.00 203.83 2.57 8.56 0.00 0.00 2.39 0.00 72 ER11c ExonRegion 0 143.39 1.75 12.39 21.74 61.11 12.19 14.89 37.97 27.56 10.43 337.40 48.14 53.24 339.52 324.85 269.99 176.45 2.45 4.53 0.37 0.76 1.77 1.01 73 E11_Dc KnownBoundary 0 247.23 0.00 13.10 26.60 96.10 12.44 10.55 43.29 28.82 12.01 285.39 98.88 82.14 371.89 403.98 205.42 139.32 0.00 0.00 0.00 0.00 2.45 0.00 74 ER11d ExonRegion 0 168.64 0.01 13.74 31.61 102.41 18.03 16.22 68.47 35.31 13.23 430.51 92.30 91.63 377.51 435.69 306.50 224.08 1.17 3.52 0.54 0.56 3.71 0.75 75 E11_Ab KnownBoundary 0 241.52 0.00 10.70 49.04 155.77 10.79 13.73 81.82 40.13 11.20 346.30 196.11 165.25 365.36 507.94 299.15 164.28 0.00 7.06 0.00 0.00 8.94 0.00 76 ER11e ExonRegion 0 105.40 0.86 8.63 25.71 59.38 7.32 6.01 32.98 13.66 6.95 202.99 96.39 80.70 162.92 206.88 125.36 109.41 0.00 2.45 0.00 0.46 4.90 0.00 77 ER11f ExonRegion 1 21.17 0.00 0.00 0.00 12.04 0.00 0.00 0.86 0.00 0.00 19.33 32.47 0.00 13.81 21.76 5.94 4.95 0.00 0.00 0.00 0.00 0.00 0.00 78 ER11g ExonRegion 0 4.23 0.00 0.00 0.00 3.57 0.00 0.00 0.00 0.00 0.00 3.87 11.55 0.00 2.71 5.80 3.96 3.30 0.00 0.00 0.00 0.00 0.00 0.00