Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BCRL4 Gene 0 715.39 0.06 0.12 1.14 17.66 7.68 3.62 2.20 2.23 1.89 142.83 424.26 5.82 474.81 1539.79 31.51 400.63 0.00 0.00 0.03 0.00 0.00 0.00 2 418352 Transcript 1 196.40 0.13 0.18 0.54 11.55 6.84 4.56 2.73 0.79 1.27 64.77 946.28 2.61 245.15 2469.42 14.48 475.55 0.00 0.00 0.02 0.00 0.00 0.00 3 441579 Transcript 0 167.18 0.01 0.03 0.55 8.78 2.81 1.65 1.30 1.07 0.31 74.02 159.79 3.95 284.65 585.52 19.48 240.79 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 3661.01 0.00 0.00 0.00 0.00 5.66 9.41 0.00 0.00 1.05 12.99 0.00 0.00 0.00 56.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 1 9.21 0.00 0.00 0.00 5.12 0.00 0.23 0.90 0.00 0.00 17.83 0.00 0.00 0.00 807.25 1.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 Ix_SR1 SilentIntronRegion 0 9.34 0.00 0.00 0.00 5.19 0.00 0.23 0.91 0.00 0.00 18.08 0.00 0.00 0.00 818.25 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 1 2322.51 0.23 0.00 3.37 17.66 11.21 7.49 4.98 2.39 8.42 178.36 219.99 0.00 2.48 2456.26 0.00 31.20 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E3a KnownJunction 1 17.19 0.00 0.00 2.06 0.00 0.00 2.08 4.44 0.00 0.00 0.00 0.00 0.00 0.00 824.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E2b_E3a KnownJunction 0 65.27 0.00 0.00 0.00 8.15 0.00 4.20 5.09 0.00 4.89 0.00 0.00 0.00 0.00 17.68 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2b ExonRegion 1 131.22 0.00 0.00 0.00 0.00 1.83 3.97 5.19 0.00 1.15 0.00 0.00 0.00 0.00 3907.99 0.00 1135.51 0.00 0.00 0.00 0.00 0.00 0.00 12 Ix Intron 1 87.96 0.00 2.11 0.43 32.18 2.01 6.61 1.41 5.21 0.21 0.00 0.00 235.22 5.29 0.00 136.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 Ix_AR1 ActiveIntronRegion 0 40.59 0.00 0.80 0.89 8.16 0.00 1.73 1.12 4.01 0.00 0.00 0.00 121.14 4.83 0.00 183.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 Ix_SR1 SilentIntronRegion 0 56.95 0.00 4.58 0.00 23.71 1.64 3.67 0.86 4.83 0.28 0.00 0.00 65.56 5.98 0.00 96.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 Ix_AR2 ActiveIntronRegion 0 73.62 0.00 1.57 0.24 29.02 2.20 4.34 3.31 8.46 0.18 0.00 0.00 146.46 4.64 0.00 216.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 Ix_SR2 SilentIntronRegion 0 85.42 0.00 1.35 0.64 32.42 2.71 9.49 0.27 4.46 0.36 0.00 0.00 279.32 4.15 0.00 85.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix_SR3 SilentIntronRegion 0 165.24 0.00 1.83 0.68 55.04 1.84 10.41 1.29 2.77 0.00 0.00 0.00 523.99 7.40 0.00 130.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 Ix Intron 1 252.69 0.00 1.53 1.70 47.87 5.83 10.41 5.60 6.46 0.29 0.00 0.00 150.80 2.64 0.00 161.02 0.00 0.00 0.53 0.00 0.00 0.00 0.00 19 Ix_SR1 SilentIntronRegion 0 260.56 0.00 1.58 1.58 50.86 5.84 11.62 6.00 6.79 0.33 0.00 0.00 163.89 2.83 0.00 166.52 0.00 0.00 0.61 0.00 0.00 0.00 0.00 20 Ix_AR1 ActiveIntronRegion 0 197.39 0.00 1.16 2.55 26.90 5.69 1.88 2.77 4.16 0.00 0.00 0.00 58.87 1.28 0.00 122.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 Ix Intron 1 165.12 0.00 1.18 1.76 30.07 4.56 5.01 1.67 3.78 0.00 0.00 0.00 89.83 5.57 0.00 214.20 0.00 0.00 0.34 0.00 0.00 0.00 0.00 22 Ix_AR1 ActiveIntronRegion 0 165.47 0.00 1.19 1.76 30.13 4.57 5.02 1.67 3.79 0.00 0.00 0.00 90.01 5.59 0.00 214.63 0.00 0.00 0.34 0.00 0.00 0.00 0.00 23 Ix Intron 0 315.16 0.07 0.42 1.66 34.64 4.09 5.16 2.36 5.19 0.17 0.00 0.00 29.60 4.77 0.00 169.60 149.20 0.00 0.00 0.00 0.00 0.00 0.00 24 Ix_SR1 SilentIntronRegion 0 113.50 0.00 0.00 0.00 31.25 2.48 2.73 0.00 4.21 0.67 0.00 0.00 27.97 3.82 0.00 119.51 146.64 0.00 0.00 0.00 0.00 0.00 0.00 25 Ix_AR2 ActiveIntronRegion 0 223.02 0.05 0.29 1.71 30.33 4.39 5.36 1.56 4.73 0.18 0.00 0.00 19.31 5.35 0.00 155.97 144.01 0.00 0.00 0.00 0.00 0.00 0.00 26 Ix_AR3 ActiveIntronRegion 0 575.53 2.03 0.00 0.31 25.52 3.88 6.72 5.19 6.37 0.00 0.00 0.00 59.71 1.44 0.00 189.53 151.21 0.00 0.00 0.00 0.00 0.00 0.00 27 Ix_AR4 ActiveIntronRegion 0 583.26 0.00 0.89 2.23 47.09 4.03 5.54 4.85 6.60 0.00 0.00 0.00 52.48 4.08 0.00 220.02 165.15 0.00 0.00 0.00 0.00 0.00 0.00 28 Ix Intron 0 7.26 0.00 0.13 0.00 2.42 0.10 0.76 0.13 0.00 0.00 0.00 0.00 19.25 0.60 0.00 32.21 7.29 0.00 0.11 0.00 0.00 0.00 0.00 29 Ix_SR1 SilentIntronRegion 0 6.02 0.00 0.29 0.00 2.52 0.29 0.78 0.00 0.00 0.00 0.00 0.00 21.89 0.51 0.00 28.58 0.26 0.00 0.50 0.00 0.00 0.00 0.00 30 Ix_AR2 ActiveIntronRegion 0 11.76 0.00 0.00 0.00 0.00 0.00 3.97 0.00 0.00 0.00 0.00 0.00 23.97 0.00 0.00 53.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 Ix_SR2 SilentIntronRegion 0 7.62 0.00 0.08 0.00 2.41 0.04 0.74 0.17 0.00 0.00 0.00 0.00 18.52 0.64 0.00 33.30 9.38 0.00 0.00 0.00 0.00 0.00 0.00 32 E3_Aa NovelBoundary 1 9.78 0.00 1.18 0.00 0.00 0.00 1.90 0.00 0.00 0.00 0.00 0.00 14.12 0.00 0.00 18.37 91.07 0.00 0.00 0.00 0.00 0.00 0.00 33 E3a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER3a ExonRegion 1 489.44 1.02 0.00 2.73 25.42 31.63 22.51 6.05 1.24 1.72 10.63 6417.35 0.00 127.90 12838.77 1.49 1168.52 0.00 0.00 0.00 0.00 0.00 0.00 35 ER3b ExonRegion 1 746.85 1.02 0.00 3.51 35.42 48.79 26.65 2.41 2.50 1.63 131.03 11174.24 1.48 858.09 24279.06 42.39 1689.02 0.00 0.00 0.00 0.00 0.00 0.00 36 E3_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 E3b_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER3c ExonRegion 0 257.01 0.00 0.00 0.27 33.71 8.85 5.11 0.00 3.71 0.00 266.63 730.44 18.49 1251.82 1394.09 80.76 1009.70 0.00 0.00 0.00 0.00 0.00 0.00 39 E3_Ac KnownBoundary 0 180.77 0.00 0.00 0.00 21.22 5.68 0.00 0.00 5.30 0.00 188.89 834.57 19.48 1008.25 817.23 46.91 565.31 0.00 0.00 0.00 0.00 0.00 0.00 40 ER3d ExonRegion 0 179.59 0.00 0.00 0.00 36.52 9.26 1.13 1.08 2.69 0.00 331.73 718.80 13.25 1234.37 1348.57 80.25 922.02 0.00 0.00 0.00 0.00 0.00 0.00 41 E3_Dc KnownBoundary 0 100.98 0.00 0.00 0.00 12.99 8.69 2.12 0.00 0.00 0.00 109.76 91.83 0.00 174.88 181.59 21.70 301.92 0.00 0.00 0.00 0.00 0.00 0.00 42 E3c_E3d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E3_Ad KnownBoundary 0 78.31 0.00 1.45 0.00 22.50 0.00 0.00 2.46 1.36 1.21 118.77 255.68 0.00 378.25 392.11 24.35 360.45 0.00 0.00 0.00 0.00 0.00 0.00 44 ER3e ExonRegion 0 146.46 0.00 1.23 0.00 26.76 9.17 1.32 1.73 1.24 0.00 298.44 494.43 9.38 873.78 947.55 57.06 810.04 0.00 0.00 0.00 0.00 0.00 0.00 45 ER3f ExonRegion 0 106.78 0.00 2.01 0.00 12.60 2.26 3.95 1.15 2.17 0.00 209.73 450.45 5.78 711.53 914.86 38.08 602.58 0.00 0.00 0.00 0.00 0.00 0.00 46 E3_Dd KnownBoundary 0 226.78 0.00 1.83 1.83 27.16 2.67 7.33 1.81 6.86 0.00 285.97 832.17 41.72 1001.95 1300.58 63.40 981.30 0.00 0.00 0.00 0.00 0.00 0.00 47 E3d_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER3g ExonRegion 0 149.47 0.00 0.05 0.60 17.36 3.98 2.54 2.15 1.24 0.51 133.65 284.46 7.64 599.27 798.09 38.65 397.32 0.00 0.00 0.00 0.00 0.00 0.00 49 E3_De NovelBoundary 0 469.79 0.00 0.00 0.00 39.98 2.38 2.21 5.79 4.66 3.06 384.94 416.54 6.82 1099.30 1041.85 65.54 987.47 0.00 0.00 0.00 0.00 0.00 0.00 50 E3e_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 E4_Aa NovelBoundary 1 558.40 0.00 0.00 3.63 34.55 22.77 0.00 0.00 1.30 0.00 245.54 425.39 20.45 1127.44 1463.01 137.49 719.68 0.00 0.00 0.00 0.00 0.00 0.00 52 ER4a ExonRegion 0 589.33 0.00 0.13 1.01 14.70 8.14 1.96 1.63 2.59 1.93 75.42 373.97 3.87 360.23 1245.29 18.64 289.38 0.00 0.00 0.15 0.00 0.00 0.00 53 E4_Da NovelBoundary 1 34.75 2.89 0.00 0.00 29.20 2.33 3.62 3.86 2.63 0.00 28.90 12.00 27.43 210.55 13.35 72.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 Ix Intron 1 4.87 0.07 0.18 0.00 1.30 0.18 0.31 0.22 0.09 0.00 0.91 1.85 14.16 1.26 4.73 36.47 3.82 0.00 0.00 0.00 0.00 0.00 0.00 55 Ix_SR2 SilentIntronRegion 0 0.38 0.00 0.00 0.00 0.24 0.00 0.00 0.00 0.00 0.00 0.00 14.17 10.45 0.00 5.67 21.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 Ix_AR1 ActiveIntronRegion 0 2.12 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 24.17 17.59 0.00 6.77 33.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 Ix_AR2 ActiveIntronRegion 0 2.12 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 12.99 21.11 0.00 18.86 40.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 Ix_SR3 SilentIntronRegion 0 1.90 0.77 0.00 0.00 2.60 0.00 0.98 0.00 0.00 0.00 2.77 7.78 12.64 2.05 22.16 34.98 8.47 0.00 0.00 0.00 0.00 0.00 0.00 59 Ix_SR4 SilentIntronRegion 0 4.64 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.89 4.75 10.16 0.40 13.98 31.77 1.64 0.00 0.00 0.00 0.00 0.00 0.00 60 Ix_AR4 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.33 9.38 0.00 12.57 29.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 Ix_SR5 SilentIntronRegion 0 5.07 0.04 0.21 0.00 1.37 0.21 0.33 0.24 0.11 0.00 0.74 1.15 14.66 1.35 3.43 37.31 3.96 0.00 0.00 0.00 0.00 0.00 0.00 62 E5_Aa NovelBoundary 0 212.70 0.00 0.00 0.00 59.00 14.48 0.00 2.46 1.65 0.00 263.86 387.43 30.19 929.84 1427.78 63.57 692.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER5a ExonRegion 0 78.21 0.00 0.17 0.56 16.11 3.18 1.93 0.70 1.85 0.00 149.21 190.33 6.07 508.91 575.35 36.88 427.45 0.00 0.00 0.00 0.00 0.00 0.00 64 E5_Da NovelBoundary 0 178.85 0.00 0.00 1.83 15.20 2.56 4.33 10.15 3.50 0.00 282.55 176.61 7.14 1240.22 1667.85 91.60 928.66 0.00 0.00 0.00 0.00 0.00 0.00 65 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 E6_Aa NovelBoundary 0 251.38 0.00 0.00 0.00 32.77 20.16 11.53 0.00 3.33 1.67 223.69 327.26 19.48 1244.81 1808.03 81.26 778.03 0.00 0.00 0.00 0.00 0.00 0.00 67 ER6a ExonRegion 0 985.01 0.09 0.08 1.48 20.38 10.46 4.11 2.94 3.02 2.49 176.34 357.54 7.02 516.46 1889.97 38.24 489.16 0.00 0.00 0.00 0.00 0.00 0.00