Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC006547.4 Gene 0 23.59 4.08 11.37 6.52 15.32 10.31 14.36 21.98 12.57 8.41 10.67 7.13 11.66 20.39 23.08 14.02 11.27 10.14 4.80 7.69 14.82 16.52 15.92 2 415503 Transcript 0 13.38 2.25 6.09 3.54 8.33 5.62 7.87 11.76 6.61 4.55 5.87 4.02 6.68 11.13 12.80 7.55 6.12 5.38 2.57 4.18 8.11 9.07 8.67 3 IG40 Intergenic 0 8.98 2.86 9.86 6.33 8.86 6.28 8.71 21.50 15.89 10.86 8.78 1.70 3.51 11.44 13.30 12.83 9.92 9.68 3.28 6.88 11.10 9.39 12.45 4 IG40_SR1 SilentIntergenicRegion 0 8.57 2.80 9.92 6.40 8.88 6.09 8.51 21.10 15.86 10.79 8.66 1.70 3.58 10.70 12.91 12.39 9.69 9.55 3.37 6.67 11.00 9.37 12.24 5 IG40_AR1 ActiveIntergenicRegion 0 19.55 4.59 8.63 4.77 8.50 11.15 13.85 32.04 17.03 12.95 12.00 1.78 1.93 30.52 23.41 24.16 15.95 13.06 0.94 12.49 13.83 9.99 18.22 6 ER1a ExonRegion 0 14.10 4.69 19.19 9.33 21.27 15.03 17.98 38.50 25.43 12.64 13.87 5.35 6.93 27.16 23.71 22.09 16.06 19.06 8.16 10.91 19.20 20.29 21.80 7 E1_Da NovelBoundary 0 56.08 18.02 25.63 22.87 44.91 29.41 41.42 79.31 51.45 17.65 47.33 30.31 26.62 60.16 65.15 26.92 26.83 18.99 4.80 12.72 35.09 39.31 58.30 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2_Aa NovelBoundary 0 53.42 6.71 67.21 46.48 19.95 17.77 34.62 93.11 122.48 57.38 77.07 31.36 7.63 43.73 88.51 58.96 44.23 5.84 13.27 8.76 71.17 31.84 27.66 10 ER2a ExonRegion 0 0.19 0.00 0.00 0.06 0.02 0.77 0.03 0.74 0.06 0.12 0.80 0.22 1.53 0.07 0.02 0.00 0.02 0.03 0.00 0.02 0.16 0.14 0.04 11 E2_Da NovelBoundary 0 116.24 6.18 63.24 54.31 47.37 70.70 51.32 104.53 116.81 49.05 136.61 57.02 116.23 274.06 226.34 204.05 138.20 67.40 23.62 19.11 75.00 141.51 141.96 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 Ix Intron 0 10.19 1.54 7.11 3.41 3.76 4.36 8.88 10.03 9.95 11.00 10.14 1.01 2.27 15.33 15.28 14.47 10.53 12.52 3.96 8.98 12.63 9.58 16.52 14 Ix_SR2 SilentIntronRegion 0 27.64 0.00 0.50 3.89 0.00 1.02 2.65 3.20 3.02 3.91 3.13 0.00 0.00 15.76 13.40 13.90 0.58 6.14 3.19 7.20 7.45 2.39 6.48 15 Ix_AR1 ActiveIntronRegion 0 12.14 1.40 6.99 4.60 5.16 5.62 10.90 11.49 11.08 13.64 12.56 1.72 2.48 17.77 18.39 15.88 13.96 16.53 3.59 10.60 14.83 11.57 19.88 16 Ix_SR1 SilentIntronRegion 0 5.48 1.92 8.02 1.49 1.95 2.75 6.38 8.50 8.96 7.63 7.10 0.00 2.17 11.60 10.69 12.42 6.18 6.92 4.65 6.66 9.77 7.24 12.35 17 Ix Intron 0 18.27 0.80 5.01 0.80 9.45 7.91 4.67 7.07 4.33 4.69 14.41 2.60 4.33 16.38 16.80 15.16 10.36 3.61 1.25 6.68 12.95 12.26 13.82 18 Ix_SR1 SilentIntronRegion 0 18.49 0.81 5.09 0.81 9.60 8.04 4.75 7.18 4.39 4.76 14.62 2.64 4.40 16.62 17.07 15.39 10.50 3.67 1.27 6.78 13.14 12.45 13.99 19 Ix Intron 0 26.54 1.70 6.11 6.79 8.95 12.27 11.07 10.77 5.39 7.86 13.74 7.77 11.99 23.16 23.54 16.15 4.14 10.37 5.33 8.00 7.37 7.84 12.28 20 Ix_SR1 SilentIntronRegion 0 26.73 1.71 6.16 6.85 9.02 12.37 11.16 10.86 5.43 7.92 13.85 7.84 12.09 23.36 23.74 16.29 4.17 10.46 5.37 8.07 7.43 7.90 12.38 21 E3_Aa NovelBoundary 0 66.46 0.00 15.94 15.42 39.22 24.30 14.53 8.17 12.04 17.81 22.27 12.60 14.28 54.51 15.82 57.59 19.07 8.50 13.65 21.48 16.80 28.66 24.93 22 ER3a ExonRegion 0 52.58 6.56 11.24 8.33 20.38 12.31 21.32 19.56 7.55 10.00 14.66 14.53 24.93 28.41 40.25 15.68 14.51 7.79 4.67 9.97 21.18 24.93 21.52