Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CTA-246H3.1 Gene 0 15.22 50.66 31.04 41.56 23.79 7.19 55.66 27.11 57.29 34.53 5.56 19.24 14.07 8.16 6.44 5.83 6.04 30.41 37.07 54.81 4.47 3.54 6.91 2 434827 Transcript 0 10.78 39.90 20.28 30.79 23.83 6.85 43.40 19.83 38.11 23.89 5.51 15.00 10.82 8.14 7.81 5.23 4.41 25.67 28.17 41.83 3.66 3.59 6.67 3 431301 Transcript 0 9.76 20.49 37.48 66.20 13.26 14.14 28.79 42.72 78.91 72.30 12.44 1.80 1.95 2.13 1.45 6.05 13.32 41.62 12.26 17.69 4.37 7.27 8.11 4 IG42 Intergenic 0 8.48 21.36 8.27 11.33 17.39 6.38 23.46 4.90 17.88 11.11 1.65 3.61 3.62 3.11 5.02 3.51 1.95 14.60 22.58 25.98 1.30 1.50 4.43 5 IG42_AR2 ActiveIntergenicRegion 0 26.09 54.28 8.35 12.71 16.01 8.04 39.38 12.63 19.49 6.88 0.95 5.67 1.96 3.37 4.43 10.97 1.92 22.14 59.71 24.87 1.68 5.87 6.67 6 IG42_AR1 ActiveIntergenicRegion 0 32.54 70.03 17.61 37.14 24.42 8.94 56.68 26.25 41.07 22.29 1.93 11.36 4.40 6.39 10.34 16.72 3.09 37.19 92.38 24.60 6.61 4.30 15.60 7 IG42_SR1 SilentIntergenicRegion 0 6.39 17.33 8.05 10.61 17.32 6.17 21.26 3.75 17.19 11.21 1.70 3.23 3.74 3.00 4.92 2.53 1.92 13.43 17.64 26.12 1.12 1.06 3.96 8 ER1a ExonRegion 0 4.40 7.67 1.60 1.47 7.20 0.00 3.77 3.86 4.37 7.23 2.08 0.00 7.94 0.00 0.89 0.00 2.79 2.56 2.21 10.97 1.70 0.00 0.00 9 ER1b ExonRegion 0 15.61 60.90 18.41 43.51 22.99 3.52 43.38 25.13 62.86 39.74 5.19 10.60 13.02 3.60 6.16 0.06 4.78 18.72 26.82 58.27 4.07 2.70 1.53 10 E1_Da KnownBoundary 0 37.56 69.66 70.72 133.65 54.24 28.85 58.12 109.17 166.00 180.46 42.80 27.16 30.68 10.54 6.18 34.69 47.41 27.23 17.51 66.35 11.74 35.76 23.90 11 E1a_E1c KnownJunction 0 39.04 53.74 55.91 127.69 53.06 56.56 88.02 95.62 160.30 155.29 49.75 7.20 7.79 8.53 0.00 19.99 53.30 21.93 49.04 70.76 14.70 29.09 32.44 12 E1_Ac KnownBoundary 0 7.04 5.72 17.92 28.10 8.06 5.17 13.16 13.84 26.30 26.11 2.68 0.00 0.00 0.00 0.00 0.00 0.00 10.24 3.67 15.85 3.09 0.00 0.00 13 ER1c ExonRegion 0 10.58 59.65 25.73 63.15 32.11 11.00 35.75 49.55 77.81 50.08 11.60 25.98 0.00 5.41 5.80 2.97 0.00 24.64 25.48 70.92 2.20 2.78 0.98 14 ER1d ExonRegion 0 17.12 52.88 40.32 51.73 24.73 7.47 62.08 37.99 73.15 42.16 6.56 16.25 14.29 7.06 5.97 4.66 6.09 22.90 34.92 58.08 4.79 2.88 2.13 15 E1_Db KnownBoundary 0 8.22 38.41 20.76 22.87 6.28 0.00 21.46 19.14 30.24 20.07 3.90 0.00 0.00 2.18 0.00 6.32 0.00 17.49 13.93 33.11 0.00 0.00 0.00 16 E1b_E1d KnownJunction 0 0.00 28.22 22.00 18.25 0.00 0.00 27.16 19.92 40.05 22.62 0.00 0.00 0.00 0.00 5.81 4.19 0.00 9.66 0.00 0.00 2.78 0.00 0.00 17 E1_Ad KnownBoundary 0 0.00 20.65 15.11 14.98 0.00 0.00 18.28 14.66 32.58 14.59 0.00 0.00 0.00 2.30 10.51 0.00 0.00 9.20 0.00 0.00 5.75 0.00 0.00 18 ER1e ExonRegion 0 7.06 64.40 23.69 12.27 5.35 0.00 36.19 9.22 28.82 14.15 1.93 0.00 4.69 6.50 14.51 2.97 4.40 3.70 8.49 24.11 4.41 4.17 2.94 19 ER1f ExonRegion 0 13.80 69.05 32.65 29.83 22.83 7.37 75.21 24.41 52.95 30.97 4.89 27.39 11.25 10.58 5.78 7.23 5.02 27.13 37.83 65.51 3.41 5.00 9.23 20 E1_Dc KnownBoundary 0 18.08 26.05 18.45 29.27 29.20 2.50 87.40 9.08 37.09 16.36 5.11 5.55 26.95 7.00 6.30 0.00 0.00 16.37 25.41 48.26 2.66 5.51 6.57 21 E1c_E1e KnownJunction 0 0.00 0.00 13.69 32.23 0.00 0.00 0.00 9.00 24.86 11.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.91 0.00 0.00 0.00 0.00 0.00 22 E1_Ae KnownBoundary 0 6.67 31.05 13.81 26.74 28.86 10.85 48.31 13.10 22.92 14.37 4.84 0.00 18.51 7.42 0.00 0.00 0.00 7.67 13.74 9.46 3.15 0.00 4.35 23 ER1g ExonRegion 0 17.99 48.81 29.20 48.16 44.60 18.64 110.99 19.88 59.90 32.30 10.31 14.43 32.83 17.87 11.61 0.00 3.85 31.10 42.47 64.89 4.41 4.17 12.73 24 ER1h ExonRegion 0 18.46 59.07 25.16 38.81 33.91 12.86 64.52 19.05 35.11 25.26 9.13 16.21 23.56 9.78 10.42 7.98 5.30 40.69 48.00 43.77 5.07 5.38 14.38 25 E1_Dd KnownBoundary 0 139.51 116.95 67.06 93.56 121.90 81.15 150.95 70.81 106.71 129.34 69.54 19.36 20.62 33.20 12.49 118.60 26.46 128.51 100.99 64.81 53.25 98.71 73.75 26 E1d_E1f KnownJunction 0 0.00 0.00 58.31 86.64 0.00 0.00 0.00 46.33 90.42 100.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 124.98 0.00 0.00 0.00 0.00 0.00 27 E1_Af KnownBoundary 0 123.95 83.01 33.68 79.58 70.54 77.46 134.52 61.78 58.07 75.72 47.96 43.36 12.66 21.60 30.90 42.98 53.02 78.76 128.47 72.55 41.14 52.29 66.41 28 ER1i ExonRegion 0 14.82 47.18 30.88 35.98 42.81 3.67 48.72 29.73 33.60 26.15 5.80 29.44 8.44 12.34 11.61 17.83 9.24 55.43 70.72 65.53 4.41 10.42 18.21 29 ER1j ExonRegion 0 14.08 40.93 40.20 45.70 24.13 5.13 48.27 27.37 64.56 40.13 4.16 30.89 12.49 12.79 8.15 10.46 9.36 55.11 58.53 73.85 4.77 5.59 17.48 30 E1_De KnownBoundary 0 12.74 21.58 66.82 111.47 20.71 5.28 38.69 67.20 155.35 132.64 0.00 31.36 25.65 7.42 6.30 4.36 12.53 119.10 47.81 38.80 5.31 0.00 15.62 31 ER1k ExonRegion 0 9.87 11.68 10.60 23.70 10.92 7.81 25.01 6.75 24.13 13.41 1.33 20.13 11.03 6.74 2.43 7.59 6.16 36.58 19.63 14.58 4.85 0.00 5.16 32 IG41 Intergenic 0 6.17 8.12 8.11 12.21 9.00 4.20 15.91 6.12 15.77 13.18 2.77 1.31 1.25 2.95 2.99 2.53 3.26 21.18 19.14 24.62 1.09 2.06 5.14 33 IG41_SR1 SilentIntergenicRegion 0 6.20 8.15 8.14 12.26 9.04 4.22 15.98 6.15 15.84 13.24 2.79 1.32 1.26 2.96 3.00 2.54 3.27 21.28 19.23 24.73 1.09 2.07 5.16