Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC002472.5 Gene 0 5.01 6.62 10.61 9.05 10.18 8.11 10.17 16.65 12.27 15.73 3.58 5.10 5.23 4.61 8.07 6.01 6.45 10.82 11.79 8.35 4.76 3.36 4.03 2 436079 Transcript 0 1.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.75 0.99 0.00 0.00 3.41 1.18 0.00 0.00 0.00 0.00 1.12 0.00 2.87 0.00 3.16 3 429962 Transcript 0 3.69 7.30 17.34 13.62 18.59 20.73 8.69 25.97 19.75 19.42 11.52 27.52 11.86 16.38 26.38 7.64 16.31 8.84 14.88 14.49 8.09 7.59 3.98 4 452284 Transcript 0 1.77 4.21 4.34 4.04 2.37 2.58 5.58 5.68 4.18 4.45 0.21 0.00 0.30 0.36 0.83 0.54 0.04 4.34 4.61 4.07 0.79 1.01 0.85 5 ER1a ExonRegion 0 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 2.22 6 E1_Ab KnownBoundary 0 0.00 0.00 0.00 3.53 0.00 0.00 2.25 4.15 4.69 4.14 2.16 0.00 0.00 0.00 4.45 0.00 0.00 2.53 4.80 6.20 2.84 0.00 4.35 7 ER1b ExonRegion 0 0.43 0.23 0.36 0.00 0.58 0.56 2.49 1.90 1.74 2.18 0.28 0.00 0.00 1.18 2.93 0.16 3.30 1.07 1.41 0.53 1.72 0.74 1.43 8 E1_Ac KnownBoundary 0 6.52 5.99 1.24 0.00 11.38 9.14 21.42 1.68 4.14 5.10 2.16 0.00 0.00 7.30 13.23 3.76 16.83 0.00 0.00 3.20 2.59 0.00 3.76 9 ER1c ExonRegion 0 11.85 6.49 11.51 10.85 14.11 15.62 19.26 19.86 13.98 22.40 11.35 18.35 19.43 15.97 25.52 21.03 19.21 13.00 21.70 9.74 11.36 8.04 7.92 10 E1_Da NovelBoundary 0 9.71 24.67 58.81 16.38 26.99 2.10 12.32 56.31 55.38 54.58 9.63 25.06 12.66 27.25 29.79 24.78 35.34 47.84 46.50 9.14 11.86 7.90 19.29 11 E1a_E2a KnownJunction 0 2.82 3.35 5.26 10.55 4.33 22.94 4.02 8.54 12.44 3.17 18.43 45.91 18.67 26.43 38.57 7.78 23.84 0.00 9.60 12.21 11.86 9.19 4.35 12 E1a_E3a KnownJunction 0 0.00 0.00 0.00 2.73 0.00 2.38 0.00 2.51 0.00 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 6.82 2.35 0.00 0.00 0.00 0.00 0.00 0.00 5.75 0.00 4.10 14 E2_Aa NovelBoundary 0 71.57 90.38 79.57 43.18 111.04 122.15 104.53 113.20 103.50 81.07 22.80 42.16 32.47 36.14 55.75 41.95 50.02 82.74 91.96 92.42 17.17 14.14 21.51 15 ER2a ExonRegion 0 4.57 11.25 29.42 16.68 32.86 18.52 13.37 43.39 27.06 35.68 4.62 9.12 5.06 6.34 14.20 7.50 8.79 17.69 20.15 16.77 4.32 5.99 3.61 16 E2_Da NovelBoundary 0 6.59 27.76 71.46 70.69 85.31 40.77 54.36 122.81 97.19 103.02 2.21 0.00 0.00 2.18 0.00 3.76 0.00 40.58 17.41 30.23 0.00 0.00 8.45 17 Ix Intron 0 9.05 30.43 59.61 43.21 68.93 26.16 42.29 84.80 72.32 78.61 1.21 4.28 2.26 1.28 1.93 2.63 0.86 42.96 56.72 38.95 2.99 3.15 7.27 18 Ix_SR2 SilentIntronRegion 0 5.10 15.64 44.92 21.08 42.08 29.95 22.14 71.97 56.98 46.79 0.93 7.13 3.31 0.06 3.68 2.23 0.00 34.90 48.51 28.63 1.47 2.78 11.09 19 Ix_AR2 ActiveIntronRegion 0 7.89 22.44 55.34 38.12 60.87 25.68 41.13 88.31 79.86 83.64 2.32 11.31 3.89 1.64 3.46 3.97 1.88 56.79 64.66 41.81 2.51 2.37 9.92 20 Ix_SR3 SilentIntronRegion 0 5.02 13.11 39.99 29.27 36.27 11.48 19.34 47.87 35.77 44.72 0.55 0.00 0.73 0.15 1.05 2.25 0.31 19.52 24.76 20.37 1.67 2.17 3.34 21 Ix_AR3 ActiveIntronRegion 0 15.20 51.26 93.71 65.97 101.09 39.37 59.08 129.49 113.79 119.60 1.39 3.60 2.43 2.17 1.37 3.02 0.56 64.44 86.24 59.84 5.35 5.02 8.25 22 Ix_AR4 ActiveIntronRegion 0 22.51 106.67 84.55 62.32 134.27 38.18 99.54 129.63 84.66 102.80 0.00 0.00 0.00 1.62 0.00 2.97 1.20 53.08 64.00 46.61 6.61 1.70 9.61 23 Ix_SR4 SilentIntronRegion 0 11.39 59.95 58.69 65.34 138.44 35.21 93.74 92.14 77.12 101.38 0.00 1.15 2.49 1.83 1.32 0.43 1.07 35.19 68.04 44.88 3.07 3.36 8.51 24 E3_Aa NovelBoundary 0 3.78 33.68 73.39 41.05 102.80 10.28 70.75 112.26 75.66 121.01 2.63 0.00 0.00 2.30 0.00 3.93 3.83 75.36 79.44 48.70 20.39 5.69 12.04 25 ER3a ExonRegion 0 0.47 0.76 0.83 1.03 0.94 1.61 1.40 1.27 1.37 0.86 0.05 0.00 0.01 0.22 0.00 0.22 0.12 1.32 0.48 0.31 0.48 0.00 0.66 26 E3_Ab KnownBoundary 0 6.74 11.25 43.55 23.57 12.65 22.03 16.30 63.34 58.25 106.59 4.95 0.00 0.00 2.47 0.00 0.00 8.23 101.60 37.84 26.27 8.40 0.00 3.93 27 ER3b ExonRegion 0 5.61 10.99 13.76 15.16 9.96 7.45 11.03 22.58 18.54 21.23 2.21 0.70 1.91 1.12 2.25 2.15 4.03 18.17 13.87 12.78 5.60 2.58 5.72 28 E3_Da KnownBoundary 0 3.26 20.65 22.97 13.38 0.00 2.84 10.02 20.99 21.44 22.03 2.37 0.00 0.00 0.00 8.90 0.00 0.00 16.66 22.97 14.96 3.09 6.18 8.45 29 ER3c ExonRegion 0 4.85 11.87 12.17 8.37 6.17 3.74 15.33 13.26 11.16 11.49 0.58 0.00 0.91 0.85 2.49 1.40 0.00 11.70 13.34 11.88 1.88 3.04 1.88