Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PEX26 Gene 0 36.47 56.43 76.82 60.71 54.08 53.11 69.83 58.96 49.42 83.13 139.89 67.00 71.11 138.38 106.89 101.99 82.16 100.09 98.26 71.95 62.48 40.97 57.98 2 329627 Transcript 0 38.16 33.33 41.77 30.45 52.14 43.92 59.12 34.01 24.44 41.93 86.58 37.85 43.75 77.70 59.61 67.94 51.98 53.34 58.47 38.17 30.87 21.54 31.64 3 399744 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 474897 Transcript 0 0.11 0.73 0.41 2.18 0.00 0.20 0.80 0.07 0.60 1.71 0.00 0.00 0.00 0.20 0.00 0.21 1.58 0.80 0.81 0.06 0.60 0.62 0.17 5 428061 Transcript 1 3.78 15.06 58.72 17.98 20.54 18.51 36.48 28.30 12.24 39.33 90.81 44.56 12.99 51.27 91.48 58.10 57.41 66.53 43.95 24.42 25.64 14.57 25.95 6 399746 Transcript 0 0.00 0.00 113.86 52.34 0.00 0.00 0.00 63.05 48.90 106.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 138.04 0.00 0.00 0.00 0.00 0.00 7 399743 Transcript 0 2.30 1.76 3.76 2.02 1.44 4.20 7.69 2.74 3.83 5.81 11.38 3.46 5.34 15.24 11.39 9.60 8.32 7.07 5.03 5.53 4.00 1.99 5.23 8 ER1a ExonRegion 1 1.67 1.35 2.17 0.40 0.62 4.67 2.46 1.99 0.10 0.91 29.02 0.00 3.16 31.27 13.29 14.48 8.94 2.26 2.96 1.88 1.74 3.80 3.62 9 E1_Ab KnownBoundary 0 7.56 0.00 0.00 0.00 0.00 2.27 2.25 1.64 0.00 1.10 18.27 0.00 0.00 2.47 4.45 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 10 E1_Ac KnownBoundary 0 22.30 40.85 15.26 9.32 19.02 45.49 42.93 5.91 3.39 16.90 52.86 0.00 0.00 20.43 26.70 102.79 37.77 35.03 71.06 58.04 10.56 16.90 42.94 11 ER1b ExonRegion 1 22.68 40.96 14.18 6.81 21.79 57.37 51.26 12.84 6.18 20.81 77.87 0.00 4.69 51.04 52.22 81.52 35.84 60.98 82.82 72.04 22.98 15.18 33.98 12 ER1c ExonRegion 1 42.13 70.41 20.22 16.27 46.32 87.62 103.31 20.26 9.30 38.82 121.05 0.68 2.78 109.78 85.68 121.11 71.07 82.74 144.34 121.54 59.84 33.34 60.20 13 E1_Da KnownBoundary 1 33.93 120.11 26.70 28.90 46.69 85.63 98.39 33.23 19.44 59.26 91.55 0.00 0.00 83.17 36.47 89.72 65.26 167.02 185.70 150.21 63.32 42.37 87.24 14 E1a_E1d KnownJunction 1 48.97 12.30 26.88 7.16 49.41 43.44 67.83 17.58 9.20 26.11 71.65 0.00 0.00 33.73 32.02 62.04 49.93 59.82 50.07 33.17 26.01 8.14 15.54 15 ER1d ExonRegion 1 4.94 10.89 38.11 26.37 11.67 20.19 17.70 31.91 23.12 53.08 76.16 4.92 5.56 64.64 57.29 74.04 57.53 84.48 102.79 86.53 49.17 25.67 48.28 16 E1_Ad KnownBoundary 1 0.00 13.48 42.64 19.18 49.24 49.40 52.16 37.25 27.43 58.26 65.54 0.00 0.00 76.05 22.25 35.55 35.62 84.65 18.45 49.79 43.31 19.59 16.13 17 ER1e ExonRegion 1 8.26 53.12 50.39 29.55 30.13 88.25 79.13 38.24 27.55 84.81 103.30 11.65 5.15 98.89 57.92 38.82 72.58 59.74 37.04 76.99 54.30 21.38 29.69 18 E1_Ae KnownBoundary 0 7.56 104.26 46.92 24.81 15.28 62.58 37.10 37.95 32.35 87.49 107.87 29.26 19.64 131.79 81.59 71.18 67.51 50.74 68.14 89.68 51.58 26.45 46.69 19 ER1f ExonRegion 1 12.69 28.14 42.39 27.62 19.99 29.25 29.78 32.69 36.65 74.56 107.51 23.31 18.15 148.32 89.60 69.60 74.88 88.19 64.28 65.19 62.92 24.84 44.97 20 E1_Db KnownBoundary 0 0.00 0.00 3.08 3.20 8.06 2.90 16.38 4.11 4.63 4.59 6.32 0.00 8.28 4.71 22.25 11.96 12.62 9.33 0.00 0.00 7.66 8.57 4.35 21 E1b_E2a KnownJunction 0 16.60 33.48 63.10 44.98 35.14 35.21 39.83 50.89 49.33 90.71 88.81 25.36 26.78 182.12 145.87 26.49 76.86 110.22 91.39 69.48 102.12 40.90 76.23 22 ER1g ExonRegion 0 4.59 3.52 7.52 4.05 2.88 3.23 13.26 5.48 5.13 8.94 15.70 6.92 10.67 23.24 22.78 19.21 16.63 11.90 6.11 11.05 7.99 3.97 10.46 23 E1_Dc NovelBoundary 1 0.00 0.00 11.12 12.42 12.65 2.84 27.82 13.47 13.25 10.45 16.74 49.37 28.24 33.37 24.72 68.02 20.48 18.45 4.80 17.71 7.97 6.06 8.37 24 E1c_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 5.17 2.12 0.00 2.52 2.69 7.05 0.00 0.00 7.24 0.00 0.00 0.00 2.24 3.95 0.00 0.00 0.00 0.00 25 I1_AR1 ActiveIntronRegion 0 7.78 4.99 5.36 1.49 2.62 0.90 15.58 7.58 4.96 5.45 17.04 9.18 12.72 22.16 17.41 18.95 21.85 7.88 8.59 8.87 3.78 3.07 10.80 26 ER2a ExonRegion 0 48.29 66.36 115.47 71.40 32.70 53.38 66.72 88.36 71.63 157.08 242.37 74.22 73.61 257.19 132.45 148.46 159.68 174.28 119.03 119.78 129.68 49.74 79.08 27 E2a_E3a KnownJunction 1 66.16 65.38 123.83 66.72 70.12 72.06 74.28 85.84 67.36 154.35 237.06 72.77 96.75 268.82 94.69 173.29 146.24 162.04 105.04 116.71 142.09 45.37 93.39 28 E2a_E6a KnownJunction 0 0.00 2.50 1.83 11.52 0.00 0.00 3.75 0.00 3.21 9.29 0.00 0.00 0.00 0.00 0.00 0.00 9.26 3.73 4.52 0.00 2.59 2.57 0.00 29 E3_Aa NovelBoundary 0 0.00 3.22 11.62 29.30 19.27 4.88 16.83 1.56 5.30 13.75 9.53 0.00 0.00 9.36 22.99 17.26 0.00 7.46 0.00 8.95 5.81 5.63 13.06 30 ER3a ExonRegion 0 32.18 69.17 149.75 96.99 47.82 65.29 80.62 96.54 78.61 182.00 282.99 73.40 83.04 278.66 196.72 173.25 178.77 193.78 186.80 137.00 141.07 74.94 104.63 31 E3a_E4a KnownJunction 1 19.11 49.79 159.84 97.96 20.20 84.10 82.50 97.10 98.26 157.49 351.88 83.88 45.61 165.34 133.88 145.43 124.73 204.82 165.46 136.02 149.87 86.89 70.77 32 E3a_E5a KnownJunction 1 3.78 15.06 58.72 17.98 20.54 18.51 36.48 28.30 12.24 39.33 90.81 44.56 12.99 51.27 91.48 58.10 57.41 66.53 43.95 24.42 25.64 14.57 25.95 33 ER4a ExonRegion 0 27.01 53.34 139.34 108.64 38.97 61.00 67.58 78.51 96.36 152.46 287.92 69.92 100.82 209.01 163.58 138.58 138.97 209.05 212.47 129.67 123.27 71.51 100.76 34 E4a_E5a KnownJunction 1 69.86 102.68 172.91 127.26 56.62 98.07 94.42 90.86 112.35 146.45 357.20 62.42 165.90 252.99 214.60 166.79 145.96 234.29 363.68 156.92 177.24 118.06 133.34 35 ER5a ExonRegion 0 20.94 68.06 186.60 101.81 47.59 69.88 70.59 95.25 88.67 166.42 294.79 84.65 104.18 253.60 189.32 183.20 172.07 227.23 201.08 137.80 151.96 86.31 103.09 36 E5_Da KnownBoundary 1 0.00 17.17 111.23 41.49 4.07 26.52 23.72 44.81 32.15 73.01 81.76 12.30 13.64 66.75 57.48 70.15 72.37 73.12 54.21 49.73 39.41 16.66 14.17 37 E5a_E5b KnownJunction 0 0.00 0.00 113.86 52.34 0.00 0.00 0.00 63.05 48.90 106.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 138.04 0.00 0.00 0.00 0.00 0.00 38 E5_Ab KnownBoundary 0 18.97 20.65 64.75 45.08 21.90 32.77 39.48 40.33 41.78 66.91 71.81 43.96 19.80 46.62 18.54 55.11 49.65 102.39 83.11 57.46 47.20 40.78 45.75 39 ER5b ExonRegion 0 16.93 48.81 161.99 82.32 28.90 60.52 59.84 75.36 69.17 146.12 195.61 59.75 62.85 214.38 139.26 165.84 122.79 192.17 125.50 110.64 98.29 52.92 76.35 40 ER5c ExonRegion 0 20.50 57.58 169.14 96.20 20.90 42.01 57.90 78.73 75.25 129.62 167.94 54.25 71.43 191.60 168.39 140.71 90.33 186.06 116.86 120.81 96.80 41.82 69.29 41 E5_Db KnownBoundary 0 56.08 81.04 204.46 125.29 38.79 60.93 110.63 104.00 78.79 126.04 150.83 72.32 108.27 339.75 255.64 143.30 125.48 180.49 91.58 170.02 108.17 67.17 87.50 42 ER5d ExonRegion 0 31.87 57.61 111.62 77.53 37.56 53.35 81.03 65.10 56.77 109.48 177.81 56.22 57.68 203.89 162.58 126.17 93.32 163.25 91.79 112.16 106.44 45.46 57.13 43 E5_Dc KnownBoundary 0 27.12 73.80 152.89 98.82 73.09 83.59 102.63 68.55 65.71 96.30 186.47 47.72 72.88 182.47 74.66 195.93 87.52 235.04 164.33 131.16 93.65 33.31 57.45 44 ER5e ExonRegion 0 31.64 98.21 116.10 95.98 64.23 62.02 117.72 78.17 91.25 118.56 263.28 87.82 60.56 243.67 187.91 196.87 130.64 197.09 166.04 123.60 104.09 64.96 77.94 45 E5_Dd KnownBoundary 1 74.68 127.41 115.11 122.66 67.40 109.82 254.16 93.07 107.58 154.51 320.24 67.67 58.28 219.14 248.22 200.12 184.01 182.73 245.75 144.20 136.10 97.48 82.46 46 ER5f ExonRegion 0 61.28 92.77 122.63 100.03 69.46 82.17 115.73 98.40 81.66 129.86 238.58 110.56 102.75 213.05 175.00 171.83 129.52 183.24 157.19 112.28 100.56 70.36 93.89 47 E5_De KnownBoundary 0 38.15 57.16 142.81 136.65 150.00 119.48 124.85 102.85 89.24 99.68 206.32 98.73 60.55 211.79 156.01 216.44 118.65 205.36 169.98 110.64 78.02 52.11 97.14 48 ER5g ExonRegion 0 63.83 86.34 96.27 83.80 106.40 83.65 107.07 82.45 64.00 98.78 159.07 113.56 128.10 168.11 133.53 127.29 97.06 97.94 122.37 79.47 64.86 52.69 75.75 49 E5_Df NovelBoundary 0 369.03 268.11 186.36 226.41 269.44 196.99 421.89 255.85 199.10 204.88 154.88 70.22 122.23 56.57 115.95 231.05 208.98 223.56 225.51 343.30 315.25 278.55 331.64 50 I5 Intron 0 25.92 36.85 38.30 43.18 48.17 25.88 45.65 29.49 23.52 44.25 19.17 27.19 23.91 22.17 25.52 24.16 24.21 21.35 28.16 24.40 20.98 18.48 27.25 51 I5_AR2 ActiveIntronRegion 0 25.29 29.37 63.28 59.40 35.79 27.58 46.59 45.02 35.12 69.39 37.91 35.91 38.16 45.86 54.88 51.58 38.06 48.27 46.01 43.76 53.56 33.81 51.16 52 I5_SR3 SilentIntronRegion 0 33.10 17.48 16.20 18.60 53.53 23.51 33.76 14.52 11.40 24.56 12.80 17.51 7.70 7.07 16.01 9.20 13.02 3.63 13.01 7.79 6.20 8.81 11.58 53 I5_AR3 ActiveIntronRegion 0 22.85 24.08 44.13 44.51 65.54 42.55 57.07 27.60 28.77 45.30 25.54 33.10 35.14 29.14 27.07 28.74 42.82 19.33 28.74 24.34 28.58 18.13 34.31 54 I5_SR4 SilentIntronRegion 0 30.14 33.64 34.04 40.50 55.01 27.46 51.97 29.32 23.03 41.39 18.25 26.59 19.23 22.19 24.09 26.48 22.43 22.87 35.66 24.21 17.55 18.97 31.47 55 I5_AR4 ActiveIntronRegion 0 56.82 121.84 80.46 94.35 75.68 36.50 66.34 48.65 39.64 68.11 15.24 34.74 32.68 16.76 26.31 15.75 25.20 16.41 28.70 32.45 15.70 29.32 24.44 56 I5_AR5 ActiveIntronRegion 0 19.69 44.47 14.92 24.41 30.25 14.59 44.09 14.95 6.55 15.96 6.22 11.86 10.81 5.15 12.99 4.91 3.16 5.78 4.85 6.29 3.64 3.62 9.70 57 I5_SR5 SilentIntronRegion 0 6.56 13.72 3.87 10.96 15.94 5.39 20.90 8.65 9.24 13.44 3.75 17.30 8.25 2.86 5.18 0.96 2.66 0.74 5.36 8.30 2.08 2.75 3.35 58 I5_AR6 ActiveIntronRegion 0 4.13 16.21 10.31 18.00 26.56 10.77 24.91 16.82 8.80 27.54 9.26 18.27 16.80 11.46 9.43 10.97 12.76 12.46 11.87 13.48 6.88 5.51 8.97 59 I5 Intron 0 3.11 13.27 11.24 16.98 19.92 7.92 20.32 13.02 8.29 16.80 9.59 12.15 9.25 10.53 7.75 10.38 9.40 8.44 8.49 11.93 5.87 2.49 6.21 60 I5_AR1 ActiveIntronRegion 0 1.17 10.09 9.58 15.12 23.60 5.56 15.69 12.12 7.61 16.48 11.71 8.57 3.19 8.47 2.92 14.75 9.10 7.34 5.27 11.75 6.08 2.87 5.67 61 I5_SR1 SilentIntronRegion 0 2.24 5.86 5.30 11.18 3.93 1.62 13.12 7.68 4.87 5.84 9.49 14.52 8.41 6.64 2.56 2.88 2.82 2.28 5.71 6.57 2.53 0.00 1.99 62 I5_AR2 ActiveIntronRegion 0 4.30 15.86 12.83 18.71 19.62 9.92 23.73 14.14 9.06 18.20 8.48 13.96 12.75 12.12 11.00 8.78 10.30 9.72 10.61 12.64 6.14 2.55 6.97 63 I5_SR1 SilentIntronRegion 0 6.01 10.32 15.49 9.19 11.25 10.81 17.13 10.08 6.11 15.28 4.84 11.50 7.89 4.84 8.11 7.60 9.08 5.19 8.35 7.88 5.42 3.05 4.86 64 I5_AR1 ActiveIntronRegion 0 9.79 11.23 16.62 19.64 15.23 7.89 17.27 20.43 6.97 32.81 7.39 26.82 10.32 7.18 13.26 11.01 11.62 8.20 11.73 7.30 8.66 7.19 15.02 65 Ix_AR1 ActiveIntronRegion 0 2.46 2.78 4.96 5.93 4.99 1.79 5.45 4.77 4.59 5.44 1.02 18.68 9.07 3.44 2.85 4.90 1.39 3.23 5.68 5.22 3.00 3.32 3.93 66 Ix_AR3 ActiveIntronRegion 0 1.76 2.51 6.31 2.57 3.02 0.71 3.55 2.60 4.52 5.46 1.51 5.72 4.90 5.01 2.39 2.99 1.26 6.38 3.36 7.57 13.22 3.82 4.53 67 ER6a ExonRegion 0 0.28 0.99 1.02 5.21 0.00 0.86 1.46 0.59 1.59 3.80 0.00 0.00 0.00 1.18 0.00 0.68 2.22 1.55 1.91 0.49 2.08 1.89 1.34 68 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69 ER7a ExonRegion 0 0.30 2.05 0.00 0.71 0.00 0.59 0.90 0.00 0.00 0.58 0.00 0.00 0.00 0.46 0.00 1.02 1.13 1.10 0.04 0.00 0.00 0.42 0.00 70 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 ER8a ExonRegion 0 0.32 0.33 0.41 0.00 0.00 0.14 0.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.17 0.09 0.00 72 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 Ix_AR2 ActiveIntronRegion 0 7.83 4.07 4.90 16.76 16.05 2.75 9.53 4.49 6.18 4.82 1.16 10.39 4.69 6.01 3.19 5.94 5.61 1.85 0.00 7.66 6.17 5.63 0.00 74 Ix_AR4 ActiveIntronRegion 0 6.13 3.10 8.96 17.93 9.44 0.00 8.64 5.19 5.66 6.88 0.00 9.34 4.69 3.42 6.41 0.78 3.30 2.63 0.00 8.17 4.41 4.17 0.00 75 Ix_AR7 ActiveIntronRegion 0 4.23 6.10 16.02 10.06 0.00 3.67 8.25 1.73 2.47 5.03 1.93 6.33 0.00 3.25 2.90 0.00 0.00 2.70 0.00 0.00 1.53 0.00 0.00 76 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00