Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C22orf29 Gene 0 9.55 14.74 11.06 13.85 13.21 13.86 15.97 12.67 9.84 12.65 13.15 9.33 7.60 16.69 13.72 16.51 12.70 29.87 13.97 14.63 8.93 5.64 10.46 2 407472 Transcript 0 0.00 0.00 0.00 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.79 0.00 0.00 0.00 1.19 0.14 0.00 0.59 1.30 0.19 0.00 0.00 0.00 3 405640 Transcript 0 0.93 0.02 0.26 1.58 0.09 0.02 1.49 1.83 2.43 3.68 0.73 1.50 1.05 4.68 7.05 2.60 4.53 5.19 1.58 2.18 1.04 0.07 3.83 4 484072 Transcript 0 0.00 0.00 5.26 0.00 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 5 328554 Transcript 0 0.00 0.00 3.16 5.49 0.00 0.00 1.94 0.00 1.19 1.64 2.47 0.00 0.00 2.65 10.26 7.18 16.27 5.06 0.00 0.00 11.74 2.94 0.00 6 416337 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 2.17 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 2.37 0.27 0.00 1.18 2.61 0.39 0.00 0.00 0.00 8 E1_Ac KnownBoundary 0 3.63 0.00 0.00 2.06 8.32 14.14 11.22 0.00 0.00 0.00 10.16 0.00 6.33 26.08 15.08 12.48 9.16 7.46 14.40 3.26 3.03 0.00 0.00 9 ER1b ExonRegion 0 0.00 1.41 0.00 0.41 0.35 8.05 3.80 0.00 0.00 1.15 3.03 0.00 0.00 2.47 2.90 2.97 3.16 1.85 5.26 3.61 1.82 0.00 0.38 10 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1c ExonRegion 0 0.00 6.10 0.00 1.42 7.79 10.68 9.79 0.00 0.00 2.29 7.48 0.00 2.24 7.84 5.42 5.04 9.62 3.53 9.83 6.38 2.20 0.00 5.75 12 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E1f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1d ExonRegion 0 3.28 7.22 0.00 2.73 10.03 6.79 11.19 1.56 0.00 2.29 10.44 0.00 4.69 12.99 17.12 15.90 13.20 7.30 17.84 4.57 4.96 0.00 8.81 16 ER1e ExonRegion 0 4.23 2.03 1.23 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.70 0.00 0.00 0.00 0.80 0.00 0.00 0.00 2.94 17 ER1f ExonRegion 0 3.70 3.64 0.75 1.63 0.00 0.00 0.00 0.98 0.00 1.31 0.19 0.00 0.00 1.94 1.58 0.80 2.88 1.56 0.00 1.62 1.33 0.98 1.14 18 E1_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1b_E1f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E1_Dc KnownBoundary 0 0.00 0.00 3.28 5.63 0.00 0.00 3.80 4.76 2.98 1.02 0.00 0.00 0.00 2.12 0.00 7.69 4.58 6.76 0.00 0.00 0.00 3.06 0.00 21 E1c_E1f KnownJunction 0 0.00 0.00 3.16 5.49 0.00 0.00 1.94 0.00 1.19 1.64 2.47 0.00 0.00 2.65 10.26 7.18 16.27 5.06 0.00 0.00 11.74 2.94 0.00 22 ER1g ExonRegion 0 0.00 0.00 2.01 3.84 0.00 0.00 2.23 0.00 0.00 1.51 1.93 0.00 0.00 4.21 3.82 5.94 9.15 3.70 0.00 0.00 9.22 2.08 0.00 23 ER1h ExonRegion 0 0.93 0.02 0.26 1.58 0.09 0.02 1.49 1.83 2.43 3.68 0.73 1.50 1.05 4.68 7.05 2.60 4.53 5.19 1.58 2.18 1.04 0.07 3.83 24 E1_Af KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER1i ExonRegion 0 3.20 2.29 12.09 13.22 2.56 6.99 8.48 20.87 13.55 24.61 25.07 4.92 10.80 35.49 36.72 40.50 24.38 44.90 29.80 20.39 19.97 10.85 25.21 26 E1d_E2a KnownJunction 0 6.30 2.57 22.29 18.71 8.32 4.49 4.06 46.87 26.13 52.49 71.86 12.90 21.10 56.33 37.95 34.95 46.10 91.99 24.85 36.62 33.73 14.76 30.22 27 E1d_E2b KnownJunction 0 0.00 0.00 5.26 0.00 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 28 Ix Intron 0 3.22 2.59 4.30 3.60 4.82 4.01 8.07 4.71 5.40 4.50 9.26 1.19 1.83 12.74 8.05 10.79 7.41 12.24 5.91 8.96 4.21 1.33 3.82 29 Ix_SR2 SilentIntronRegion 0 1.23 1.72 3.79 2.93 3.77 4.36 5.88 3.29 3.41 4.19 8.93 0.84 0.56 13.35 6.02 8.41 4.93 9.40 5.03 7.08 4.00 0.73 3.10 30 Ix_AR2 ActiveIntronRegion 0 3.05 2.65 5.17 4.25 6.74 3.34 8.80 4.82 7.50 4.64 7.10 0.37 2.28 11.58 9.40 7.68 9.96 12.14 5.28 10.09 5.16 1.71 3.13 31 Ix_SR1 SilentIntronRegion 0 8.24 4.64 4.37 4.33 4.58 4.38 12.37 8.02 7.10 5.19 13.62 3.28 4.20 13.54 10.95 21.24 9.53 19.13 9.13 11.90 3.46 2.17 6.41 32 E2_Aa NovelBoundary 0 9.85 0.00 22.71 10.06 0.00 5.11 7.73 8.75 9.75 10.21 18.27 0.00 0.00 19.37 18.79 11.96 17.02 20.27 17.13 12.46 2.41 0.00 0.00 33 ER2a ExonRegion 0 7.71 7.50 20.96 15.81 6.22 8.54 10.26 23.83 18.21 31.14 39.85 13.68 18.62 50.74 33.53 32.38 31.79 82.45 29.26 26.70 26.29 8.42 15.79 34 E2_Da KnownBoundary 0 7.04 0.00 4.67 4.99 4.33 0.00 9.76 11.58 3.04 4.54 7.53 0.00 0.00 0.00 4.57 7.52 4.77 10.11 0.00 6.33 0.00 0.00 0.00 35 ER2b ExonRegion 0 13.08 20.74 13.73 18.37 18.69 19.30 22.13 15.61 12.20 14.61 14.45 12.13 8.94 18.10 15.49 19.84 14.46 34.03 16.60 18.14 9.77 7.16 13.00 36 E2_Ab KnownBoundary 0 3.78 3.35 0.00 2.83 3.48 2.44 3.71 2.55 3.04 0.00 2.58 0.00 0.00 3.00 0.00 3.67 0.00 4.89 3.95 0.00 0.00 0.00 0.00 37 ER2c ExonRegion 0 0.00 0.08 0.26 0.00 0.11 0.00 0.11 0.11 0.10 0.14 0.08 0.15 0.00 0.16 0.12 0.00 0.00 0.11 0.26 0.00 0.10 0.00 0.12 38 ER2d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00