Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GNB1L Gene 0 2.98 2.81 16.00 7.46 2.99 3.10 6.88 4.21 4.02 7.45 5.90 0.97 0.48 9.21 10.99 4.51 5.69 9.03 4.88 4.91 5.56 3.09 3.45 2 405009 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 329517 Transcript 0 2.10 1.62 11.96 5.87 2.74 2.77 6.08 2.30 3.24 4.91 0.08 0.21 0.34 0.42 1.16 0.18 0.62 5.26 2.58 2.42 0.84 0.63 1.90 4 453108 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 1.95 0.00 0.00 0.00 0.00 0.00 5 403325 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 481086 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 460402 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 451413 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 1.46 1.07 1.34 0.87 2.54 0.00 2.21 0.00 0.00 0.40 3.81 0.00 0.00 12.78 2.72 2.64 3.98 3.51 4.53 0.77 0.98 0.00 1.33 10 E1a_E1e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1b ExonRegion 0 8.28 10.17 7.41 0.83 2.44 1.44 1.84 0.00 0.00 3.34 19.75 0.00 0.00 25.99 11.98 14.21 14.50 8.60 6.79 4.26 13.61 0.00 5.87 12 E1_Ad KnownBoundary 0 14.60 3.09 2.81 4.93 4.33 7.15 0.00 0.00 4.57 3.01 0.00 0.00 0.00 0.00 4.70 0.00 3.74 6.26 3.58 6.01 0.00 0.00 3.41 13 ER1c ExonRegion 0 4.23 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1d ExonRegion 0 4.23 0.00 0.00 0.00 2.68 0.00 0.40 0.00 1.24 1.15 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.18 0.00 0.00 0.00 0.00 0.00 15 ER1e ExonRegion 0 1.59 0.00 2.07 0.00 0.56 2.07 3.26 0.00 0.66 0.38 0.00 0.00 0.00 0.55 0.80 1.22 0.00 1.92 0.00 1.75 0.00 0.86 1.21 16 E1_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E1b_E1e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER1f ExonRegion 0 0.03 0.10 1.72 2.17 0.00 0.80 0.94 0.82 0.00 0.19 1.50 0.00 0.00 0.80 2.39 2.22 1.27 1.38 4.59 0.15 3.01 0.74 0.04 19 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER1g ExonRegion 0 0.57 8.09 17.83 2.74 2.51 4.22 4.03 1.89 2.59 7.00 14.74 0.90 0.00 13.15 9.34 4.74 14.30 13.34 6.90 9.22 17.72 4.06 6.03 21 E1c_E2a KnownJunction 0 0.00 12.83 18.92 13.19 3.90 5.62 10.07 10.35 7.67 9.91 24.85 6.30 0.00 23.31 13.35 3.59 28.70 19.48 21.55 23.59 15.69 13.78 17.33 22 E1c_E4a KnownJunction 0 0.00 0.00 5.82 0.00 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 4.42 0.00 3.15 0.00 0.00 23 Ix Intron 0 3.22 2.59 4.30 3.60 4.82 4.01 8.07 4.71 5.40 4.50 9.26 1.19 1.83 12.74 8.05 10.79 7.41 12.24 5.91 8.96 4.21 1.33 3.82 24 Ix_SR2 SilentIntronRegion 0 1.23 1.72 3.79 2.93 3.77 4.36 5.88 3.29 3.41 4.19 8.93 0.84 0.56 13.35 6.02 8.41 4.93 9.40 5.03 7.08 4.00 0.73 3.10 25 Ix_AR2 ActiveIntronRegion 0 3.05 2.65 5.17 4.25 6.74 3.34 8.80 4.82 7.50 4.64 7.10 0.37 2.28 11.58 9.40 7.68 9.96 12.14 5.28 10.09 5.16 1.71 3.13 26 Ix_SR1 SilentIntronRegion 0 8.24 4.64 4.37 4.33 4.58 4.38 12.37 8.02 7.10 5.19 13.62 3.28 4.20 13.54 10.95 21.24 9.53 19.13 9.13 11.90 3.46 2.17 6.41 27 E2_Ab NovelBoundary 0 2.89 5.06 19.93 8.06 4.16 11.41 8.35 10.02 1.45 13.40 29.38 0.00 0.00 6.95 0.00 11.36 28.14 17.24 7.91 7.93 23.54 5.14 0.00 28 ER2a ExonRegion 0 1.12 4.55 18.31 9.14 5.04 7.44 11.99 6.91 4.00 10.93 33.66 4.33 0.00 20.83 8.70 11.54 33.01 22.17 14.80 16.77 23.72 11.03 9.85 29 ER2b ExonRegion 0 6.66 4.35 25.99 8.58 2.57 5.04 7.93 9.28 3.77 11.67 24.55 0.17 0.04 38.23 26.80 26.00 21.47 24.94 11.87 13.55 25.13 5.61 8.23 30 E2a_E3a KnownJunction 0 3.26 8.88 19.40 3.86 0.00 10.05 7.68 7.68 6.66 16.36 24.53 0.00 0.00 36.38 13.35 8.20 20.48 26.61 0.00 16.62 16.87 5.51 8.11 31 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 1.95 0.00 0.00 0.00 0.00 0.00 32 ER3a ExonRegion 0 3.34 8.23 19.27 8.96 2.31 6.94 12.35 7.02 5.10 12.25 20.28 1.65 1.53 31.01 29.54 12.64 20.67 20.37 5.28 13.19 26.30 10.37 4.92 33 E3a_E4a KnownJunction 0 3.11 6.31 30.75 8.56 0.00 5.17 0.00 12.57 2.95 13.48 28.64 0.00 0.00 32.37 22.99 24.61 35.16 28.02 0.00 9.01 19.65 8.33 11.44 34 ER4a ExonRegion 0 3.97 8.96 30.03 10.48 4.14 2.74 6.90 11.23 5.23 16.96 38.96 4.61 1.29 55.74 46.97 22.20 20.37 31.44 18.67 19.97 23.56 12.49 12.42 35 E4_Da NovelBoundary 0 12.45 13.29 9.82 5.96 6.79 2.44 1.68 8.75 6.57 14.77 15.11 11.10 0.00 34.02 24.72 11.19 33.57 21.31 3.95 13.10 15.38 0.00 14.08 36 E4b_E5a KnownJunction 0 13.34 15.33 25.69 14.82 11.12 9.94 16.91 16.80 7.47 25.06 57.91 0.00 0.00 65.57 76.64 39.05 39.93 40.04 3.95 19.62 24.77 18.74 10.16 37 ER4b ExonRegion 0 10.58 15.46 20.34 9.68 10.70 5.68 11.39 16.07 7.41 21.45 47.94 3.46 0.00 75.20 62.67 32.10 51.82 34.55 5.10 18.09 21.82 14.79 14.39 38 E5_Aa NovelBoundary 0 0.00 0.00 0.00 11.89 0.00 4.77 0.00 0.00 4.72 2.36 2.63 0.00 0.00 0.00 0.00 4.36 0.00 10.65 4.80 3.26 0.00 0.00 12.38 39 ER5a ExonRegion 0 7.95 8.09 37.42 20.35 4.92 8.50 11.74 10.44 8.46 25.30 38.99 1.84 0.76 50.43 61.37 21.35 32.91 31.00 15.22 23.90 25.67 14.77 8.48 40 E5a_E6a KnownJunction 0 0.00 5.92 33.20 17.38 0.00 16.35 8.74 4.68 6.16 23.58 17.11 0.00 6.82 11.71 39.80 7.35 21.04 17.33 44.05 14.76 2.66 13.96 11.52 41 E6_Aa NovelBoundary 0 3.78 0.00 2.96 4.59 0.00 5.34 4.11 4.27 4.57 4.03 0.00 0.00 6.82 4.36 4.45 11.45 0.00 16.91 0.00 2.49 8.59 0.00 4.18 42 ER6a ExonRegion 0 6.89 12.40 42.24 17.98 2.96 9.25 15.79 13.66 9.71 28.80 33.38 3.87 2.18 45.46 78.44 15.93 31.71 17.10 21.63 18.96 24.51 16.28 12.08 43 E6_Da KnownBoundary 0 9.41 8.42 50.77 35.43 7.30 5.05 22.26 14.83 12.27 37.12 39.48 12.15 5.68 58.63 95.68 38.37 23.00 39.71 14.12 25.76 51.95 35.03 4.18 44 E6a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER6b ExonRegion 0 8.11 7.04 54.96 30.24 7.71 5.41 12.56 19.33 12.54 29.27 38.98 9.34 4.55 48.99 76.63 29.84 34.37 36.19 26.08 16.27 38.61 18.45 9.24 46 E6b_E7a KnownJunction 0 20.23 15.39 83.02 37.79 12.14 17.09 20.71 41.44 19.91 35.83 56.01 17.86 0.00 59.98 111.13 43.66 22.16 67.94 77.65 26.46 29.71 34.54 33.72 47 ER6c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER7a ExonRegion 0 10.32 11.15 62.86 22.71 7.39 4.09 14.19 20.45 8.71 24.44 33.34 4.28 0.77 56.65 76.49 33.65 33.29 29.41 14.23 16.66 23.61 18.37 12.68 49 E7_Da KnownBoundary 0 9.63 18.48 27.11 24.97 8.06 10.51 7.64 14.17 17.88 22.83 19.48 0.00 0.00 83.29 92.22 19.23 17.77 29.72 15.34 14.57 25.76 3.12 10.24 50 ER7b ExonRegion 0 12.81 3.02 31.50 19.50 7.07 8.11 15.53 14.96 12.35 17.34 26.17 6.22 0.00 53.93 61.71 19.70 22.30 25.47 4.78 11.05 20.60 7.72 17.62 51 E7_Ab KnownBoundary 0 3.19 0.00 35.16 27.60 8.32 0.00 31.66 24.93 16.15 16.73 16.06 12.90 0.00 43.68 28.31 38.02 21.32 24.37 12.24 18.47 14.33 24.98 18.52 52 ER7c ExonRegion 0 5.41 3.70 17.53 11.60 2.41 1.34 11.20 11.90 11.94 17.03 18.52 8.26 0.35 33.53 31.91 15.94 20.46 20.51 15.42 11.18 22.43 15.82 5.38 53 E7_Db KnownBoundary 0 6.74 9.01 14.55 19.88 0.00 0.00 13.65 13.80 13.89 12.87 12.11 6.30 6.82 42.15 37.33 8.12 0.00 18.24 3.67 11.63 13.90 0.00 3.84 54 ER7d ExonRegion 0 6.72 4.73 14.20 9.78 2.68 0.00 9.07 3.53 10.20 8.85 6.72 1.60 3.06 21.15 26.49 9.76 12.77 11.81 5.61 6.75 11.79 6.25 14.24 55 E7_Dc KnownBoundary 0 9.48 0.00 1.83 0.00 0.00 0.00 1.68 0.00 0.00 3.22 1.95 0.00 0.00 0.00 0.00 0.00 7.20 4.44 0.00 0.00 0.00 2.27 6.66 56 E7_Dd KnownBoundary 0 0.00 0.00 9.91 2.06 0.00 0.00 1.90 0.00 4.86 4.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.69 0.00 0.00 0.00 0.00 3.24 57 ER7e ExonRegion 0 6.35 2.03 14.70 5.45 1.78 0.00 1.32 1.73 5.35 6.50 1.93 0.00 0.00 7.58 2.90 1.98 14.30 11.09 5.31 1.42 2.20 4.17 3.92 58 ER7f ExonRegion 0 2.10 1.62 11.96 5.87 2.74 2.77 6.08 2.30 3.24 4.91 0.08 0.21 0.34 0.42 1.16 0.18 0.62 5.26 2.58 2.42 0.84 0.63 1.90