Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MRPL40 Gene 0 71.91 51.78 75.88 66.57 54.31 51.40 65.35 47.73 34.82 71.51 136.56 80.90 63.63 138.34 211.99 114.24 127.99 54.02 66.80 57.43 78.05 60.08 48.94 2 333130 Transcript 0 130.84 58.91 40.98 39.77 44.59 103.04 92.35 14.42 17.77 33.15 42.31 12.78 6.99 92.49 99.84 55.78 59.59 27.58 31.26 36.03 29.69 27.54 23.10 3 443660 Transcript 0 4.15 7.74 25.15 21.62 9.10 1.54 11.61 12.20 7.74 11.33 19.45 7.84 9.08 30.28 33.62 15.13 17.48 7.77 17.15 9.60 5.12 4.74 7.90 4 471259 Transcript 0 8.82 11.17 9.68 7.09 10.24 6.67 11.94 9.47 8.58 7.24 4.10 6.28 6.81 7.00 9.80 13.38 12.28 8.46 8.75 11.39 6.29 5.01 13.29 5 ER1a ExonRegion 0 25.81 17.11 9.22 9.07 13.59 18.61 24.15 8.64 5.44 10.19 18.41 0.71 2.27 21.49 27.77 23.63 18.25 15.93 12.60 14.99 12.55 7.58 11.71 6 E1_Ab NovelBoundary 1 1012.55 489.25 107.95 114.84 410.19 509.54 722.28 39.84 45.95 101.38 372.73 50.42 51.13 571.43 663.83 550.03 458.62 136.38 193.61 152.89 249.33 186.09 222.46 7 E1a_E2b KnownJunction 0 352.95 146.42 102.83 96.62 113.84 290.29 244.13 31.38 45.40 82.95 93.08 30.61 14.61 232.03 223.87 123.64 144.83 65.41 76.80 75.81 75.43 64.36 51.73 8 ER1b ExonRegion 1 562.31 306.20 76.63 66.25 236.04 404.68 459.37 27.22 33.17 68.81 237.40 14.84 13.07 379.99 405.45 356.34 335.87 54.84 139.13 123.33 172.28 131.19 147.25 9 ER1c ExonRegion 0 5.27 9.70 21.00 11.11 7.34 3.07 8.16 11.09 8.31 12.11 19.74 3.08 4.52 18.95 32.51 22.74 21.12 11.81 10.39 11.03 4.12 3.47 2.82 10 E1_Db NovelBoundary 0 5.78 13.62 10.70 5.23 7.72 10.73 6.23 8.38 12.30 7.74 2.58 12.75 0.00 2.47 13.35 3.85 17.30 7.17 30.78 7.67 0.00 0.00 3.41 11 E1b_E2b KnownJunction 0 3.04 5.79 29.30 32.13 10.87 0.00 15.06 13.31 7.18 10.56 19.16 12.60 13.64 41.62 34.74 7.52 13.84 3.73 23.91 8.18 6.12 6.00 12.98 12 E2_Aa NovelBoundary 0 11.11 9.08 6.86 4.99 35.65 2.90 23.63 13.92 10.50 12.17 2.37 19.51 24.02 25.90 15.95 40.42 20.57 7.50 14.68 20.33 11.80 4.71 22.28 13 ER2a ExonRegion 0 8.82 11.17 9.68 7.09 10.24 6.67 11.94 9.47 8.58 7.24 4.10 6.28 6.81 7.00 9.80 13.38 12.28 8.46 8.75 11.39 6.29 5.01 13.29 14 E2_Ab KnownBoundary 0 12.74 10.06 9.79 11.72 7.39 29.64 31.09 9.28 13.54 24.44 9.58 0.00 6.82 11.71 9.64 18.63 3.46 0.00 17.98 9.27 3.15 4.96 4.10 15 ER2b ExonRegion 0 149.71 85.85 119.84 93.22 56.09 85.13 84.94 52.96 36.19 95.19 143.71 95.61 75.32 103.24 133.42 70.69 133.31 34.19 66.09 61.29 87.80 63.26 48.76 16 E2_Da NovelBoundary 0 3.04 6.31 8.01 10.52 28.61 23.05 2.25 10.31 11.23 11.28 5.05 0.00 6.33 12.71 4.45 3.93 7.85 9.41 8.38 20.13 0.00 2.63 4.35 17 E2a_E3a KnownJunction 1 201.15 95.44 134.92 103.95 28.52 40.77 59.00 60.87 38.14 124.24 290.97 78.33 33.93 136.74 199.64 78.61 245.54 15.38 41.60 71.65 167.05 83.64 56.25 18 E3_Aa NovelBoundary 0 44.45 14.08 16.76 21.91 16.64 15.05 20.45 10.84 13.25 10.18 2.68 25.21 0.00 12.30 38.20 7.01 9.44 0.00 27.95 0.00 0.00 0.00 8.37 19 ER3a ExonRegion 0 120.02 112.18 236.49 194.88 204.74 135.30 174.85 132.78 91.57 216.59 419.72 251.22 161.94 411.08 510.31 332.39 374.33 151.02 168.56 154.18 181.49 174.62 142.14 20 E3_Da NovelBoundary 0 16.74 17.43 31.16 18.11 17.23 10.73 11.70 15.85 12.18 10.61 2.16 12.00 0.00 2.47 4.45 8.03 7.48 4.15 9.22 8.95 0.00 0.00 11.69 21 E3a_E4a KnownJunction 1 111.87 86.30 206.76 196.78 438.71 339.52 396.18 148.52 95.77 228.30 320.55 503.56 532.76 308.08 493.97 370.76 322.86 193.34 147.20 120.55 197.50 130.55 179.35 22 Ix Intron 0 18.89 12.56 17.17 19.66 15.43 10.20 17.81 20.33 16.80 13.61 5.17 7.45 3.45 3.95 12.02 13.46 6.80 19.11 16.84 15.04 2.87 2.86 3.63 23 Ix_AR1 ActiveIntronRegion 0 18.85 13.18 20.37 19.01 14.30 11.04 17.37 20.06 16.89 15.81 4.38 10.08 2.97 4.19 10.36 14.91 6.25 18.65 20.93 17.20 3.07 3.50 4.49 24 Ix_SR1 SilentIntronRegion 0 19.90 14.72 13.01 24.05 17.45 10.79 17.27 22.98 21.02 13.21 7.63 2.35 5.39 4.55 18.44 13.26 10.17 23.48 10.20 14.11 3.08 2.26 2.59 25 Ix_AR2 ActiveIntronRegion 0 17.47 5.81 10.68 14.60 17.12 5.35 21.28 16.93 8.65 4.45 4.26 5.17 2.01 1.76 7.64 7.43 3.03 13.27 10.89 7.12 1.64 1.08 1.71 26 E4_Aa NovelBoundary 0 14.22 8.88 8.84 19.05 20.88 15.67 24.25 25.47 21.85 14.42 2.16 0.00 0.00 2.18 24.35 11.19 4.11 28.02 4.80 11.63 5.68 4.78 3.33 27 ER4a ExonRegion 0 182.33 126.21 216.77 200.53 118.35 115.19 147.94 143.78 108.47 220.03 419.90 271.60 223.36 414.11 704.21 330.81 378.97 156.57 208.95 160.16 258.01 190.35 133.08 28 E4_Da KnownBoundary 0 101.13 76.37 141.75 144.80 121.65 87.73 90.45 77.30 30.27 82.28 184.63 173.16 137.33 262.64 336.36 165.17 218.23 95.47 85.93 66.92 155.37 64.05 85.28 29 ER4b ExonRegion 0 74.12 58.40 65.80 71.37 75.20 44.94 54.84 37.24 15.23 31.49 131.40 105.20 77.43 192.56 346.01 107.15 145.99 49.40 53.98 57.15 79.72 46.06 47.50 30 ER4c ExonRegion 0 13.76 13.22 10.88 13.63 6.35 0.23 8.77 3.24 2.47 6.31 15.46 7.04 4.10 23.96 47.87 20.06 15.68 1.39 4.38 17.29 1.10 10.68 5.87