Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TBX1 Gene 0 18.07 1.19 42.43 1.90 7.54 39.40 4.04 15.30 1.37 1.80 0.08 0.26 0.17 0.11 0.68 0.00 0.05 7.59 0.14 0.16 1.70 4.04 10.46 2 332710 Transcript 0 27.51 0.00 47.26 0.05 8.04 79.38 4.07 23.21 0.35 1.13 0.15 0.00 0.00 0.11 0.12 0.00 0.00 19.51 0.00 0.11 2.68 6.63 21.00 3 329705 Transcript 0 5.78 5.07 10.53 8.39 4.59 5.86 6.40 4.02 4.74 6.39 0.00 0.00 0.00 0.10 0.23 0.00 0.26 2.15 0.25 0.32 0.17 0.16 0.69 4 359500 Transcript 0 0.32 1.47 1.93 1.50 0.28 0.97 1.74 0.27 0.97 0.90 0.00 0.81 0.53 0.10 1.77 0.00 0.00 0.29 0.68 0.21 0.93 0.22 0.00 5 475303 Transcript 0 9.54 0.00 18.16 0.22 3.41 22.17 2.11 4.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.35 0.00 0.00 1.25 3.28 6.73 6 484336 Transcript 0 2.19 0.00 3.54 0.00 0.42 3.98 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.35 0.00 0.52 7 ER1a ExonRegion 0 0.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.20 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2_Aa NovelBoundary 0 14.52 0.00 2.66 0.00 0.00 10.33 0.00 12.28 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 11.43 0.00 1.55 0.00 0.00 4.68 0.56 1.71 0.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.17 0.00 0.00 0.00 0.00 1.17 11 E2_Da NovelBoundary 0 26.52 0.00 2.60 1.76 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.44 0.00 0.00 0.00 0.00 0.00 12 E2a_E3a KnownJunction 0 3.04 0.00 0.00 0.00 0.00 0.00 0.00 2.55 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 Ix Intron 0 29.09 0.00 1.98 0.18 10.89 9.12 2.75 2.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.50 0.29 0.00 0.20 0.38 1.06 14 Ix_SR1 SilentIntronRegion 0 29.19 0.00 1.99 0.18 10.93 9.15 2.76 2.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.51 0.29 0.00 0.20 0.38 1.07 15 ER3a ExonRegion 0 9.10 0.00 10.24 0.00 1.19 8.79 2.05 3.15 0.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 0.59 1.82 4.42 16 E3_Ab KnownBoundary 0 32.08 0.00 50.50 0.00 32.26 114.20 24.11 16.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.71 0.00 0.00 3.15 11.57 7.26 17 ER3b ExonRegion 0 35.39 0.00 72.81 0.00 21.31 111.00 8.33 23.66 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.07 0.00 0.00 2.84 3.77 18.43 18 E3a_E4a KnownJunction 0 33.64 0.00 91.07 0.00 11.29 96.71 3.80 35.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.28 0.00 0.00 3.03 2.39 0.00 19 ER4a ExonRegion 0 33.70 0.00 140.29 0.23 11.62 103.93 3.54 43.47 0.25 0.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.65 0.00 0.00 0.41 19.34 35.59 20 E4_Da KnownBoundary 0 24.30 0.00 20.61 1.60 0.00 15.33 1.99 4.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.01 0.00 0.00 0.00 0.00 8.71 21 E4a_E5a KnownJunction 0 44.16 0.00 138.32 0.00 12.82 61.50 3.36 43.33 1.50 2.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.09 0.00 0.00 0.00 15.98 42.43 22 ER4b ExonRegion 0 9.54 0.00 18.16 0.22 3.41 22.17 2.11 4.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.35 0.00 0.00 1.25 3.28 6.73 23 E4_Db NovelBoundary 0 6.74 0.00 9.31 0.00 0.00 52.53 1.63 4.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.91 0.00 0.00 5.13 2.39 3.93 24 Ix Intron 0 14.57 0.00 15.66 0.46 4.83 38.69 3.14 5.81 0.00 0.39 0.00 0.00 0.00 0.15 0.00 0.00 0.00 4.87 0.00 0.00 0.25 1.65 6.63 25 Ix_SR1 SilentIntronRegion 0 15.34 0.00 16.42 0.51 4.94 42.25 3.37 6.26 0.00 0.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.04 0.00 0.00 0.06 1.78 6.84 26 E5_Aa NovelBoundary 0 23.12 0.00 20.02 2.06 11.88 44.75 0.00 6.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.39 0.00 0.00 0.00 3.12 3.93 27 ER5a ExonRegion 0 51.04 0.00 166.76 0.00 22.42 108.83 12.47 49.30 1.58 1.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.26 0.00 0.00 4.25 11.11 32.41 28 E5_Da NovelBoundary 0 20.30 0.00 34.33 0.00 3.23 34.87 0.00 10.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 0.00 0.00 0.00 7.43 29 E5a_E6a KnownJunction 0 100.83 0.00 258.09 1.56 35.06 247.98 22.96 74.18 3.53 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.61 0.00 0.00 3.15 14.70 65.30 30 Ix Intron 0 31.48 0.00 28.04 0.00 8.87 39.28 3.64 11.45 0.00 0.28 0.00 0.00 0.00 0.00 0.23 0.00 0.00 4.90 0.26 0.00 0.71 2.02 8.31 31 Ix_AR1 ActiveIntronRegion 0 21.73 0.00 8.22 0.00 4.30 21.37 2.00 3.06 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.67 0.00 0.00 0.00 0.31 3.21 32 Ix_SR1 SilentIntronRegion 0 37.10 0.00 39.29 0.00 11.47 49.51 4.58 16.21 0.00 0.43 0.00 0.00 0.00 0.00 0.37 0.00 0.00 6.19 0.40 0.00 1.12 2.99 11.21 33 E6_Aa NovelBoundary 0 153.06 0.00 56.09 0.00 11.97 111.24 15.63 24.32 0.00 0.00 0.00 0.00 0.00 0.00 6.18 0.00 0.00 8.91 0.00 0.00 3.15 5.76 16.30 34 ER6a ExonRegion 0 84.05 0.00 238.48 1.70 53.10 209.04 11.32 70.31 0.64 2.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.17 0.00 0.00 7.04 13.56 48.86 35 E6_Ab KnownBoundary 0 143.66 0.00 282.87 0.00 54.84 262.06 13.16 101.95 1.71 2.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.57 0.00 0.00 11.18 8.76 46.61 36 ER6b ExonRegion 0 82.17 0.00 218.55 0.00 48.71 167.25 8.61 75.75 0.00 2.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.71 0.00 0.00 5.06 15.01 32.91 37 E6_Da NovelBoundary 0 35.78 0.00 47.19 0.00 11.29 48.72 9.76 17.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.05 0.00 0.00 0.00 0.00 0.00 38 E6a_E7a KnownJunction 0 72.01 0.00 187.99 1.66 57.64 131.86 6.14 74.71 0.00 2.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.02 0.00 0.00 3.15 20.33 27.66 39 Ix Intron 0 27.66 0.00 29.07 0.64 10.81 29.34 3.56 11.63 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.31 0.00 0.00 0.70 0.99 5.81 40 Ix_SR1 SilentIntronRegion 0 27.74 0.00 29.16 0.65 10.84 29.43 3.57 11.66 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.32 0.00 0.00 0.70 0.99 5.83 41 E7_Aa NovelBoundary 0 29.34 0.00 42.37 0.00 19.95 15.50 4.50 17.58 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 6.12 4.01 42 ER7a ExonRegion 0 62.47 0.00 138.85 0.00 27.54 88.13 4.24 57.14 0.00 1.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.48 0.00 0.00 4.63 12.23 22.85 43 E7a_E8a KnownJunction 0 49.42 0.00 135.77 1.76 19.27 73.20 3.80 51.42 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.34 0.00 0.00 5.37 9.00 18.78 44 ER8a ExonRegion 0 41.53 0.02 77.79 0.01 6.17 79.69 4.37 30.09 0.00 1.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.76 0.00 0.08 0.96 6.44 16.37 45 E8_Da KnownBoundary 0 3.70 0.00 11.86 0.00 0.00 13.34 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.44 0.00 0.00 0.00 0.00 0.00 46 E8a_E9a KnownJunction 0 39.86 0.00 66.23 0.00 11.80 119.36 6.05 30.56 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.72 0.00 0.00 3.03 8.63 30.30 47 E8a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E8a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER8b ExonRegion 0 2.19 0.00 3.54 0.00 0.42 3.98 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.35 0.00 0.52 50 E8_Db NovelBoundary 0 0.00 0.00 1.80 0.00 0.00 22.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 51 ER9a ExonRegion 0 15.15 0.00 28.29 0.11 4.29 39.39 2.09 15.87 0.70 0.60 0.31 0.00 0.00 0.22 0.24 0.00 0.00 8.30 0.00 0.23 2.34 4.62 11.70 52 E10_Aa NovelBoundary 0 10.22 5.79 56.95 27.67 4.33 7.38 7.46 11.46 2.95 10.91 0.00 0.00 0.00 2.47 0.00 0.00 9.44 4.15 13.27 0.00 2.66 2.82 3.41 53 ER10a ExonRegion 0 11.57 10.14 21.05 16.79 9.17 11.73 12.80 8.03 9.47 12.79 0.00 0.00 0.00 0.21 0.45 0.00 0.51 4.30 0.50 0.64 0.34 0.32 1.37 54 E10_Da NovelBoundary 0 13.85 6.25 30.81 21.84 7.81 12.32 3.58 12.40 6.34 20.55 2.68 0.00 0.00 0.00 0.00 0.00 0.00 10.32 0.00 5.62 0.00 2.51 12.04 55 Ix Intron 0 6.68 7.03 14.69 14.64 7.01 6.01 12.07 5.68 5.92 6.92 0.12 0.42 0.23 0.32 0.00 0.00 0.39 3.39 0.57 2.41 0.92 1.24 2.62 56 Ix_SR1 SilentIntronRegion 0 6.69 7.04 14.71 14.66 7.02 6.02 12.08 5.68 5.93 6.93 0.12 0.43 0.23 0.32 0.00 0.00 0.39 3.40 0.57 2.41 0.92 1.24 2.63 57 ER11a ExonRegion 0 0.90 5.13 7.70 5.95 1.14 3.90 6.71 1.09 3.86 3.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.17 2.71 0.82 3.73 0.89 0.00 58 E11_Da NovelBoundary 0 0.00 5.85 11.74 6.96 3.90 5.62 12.32 2.14 4.92 8.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.78 0.00 6.26 0.00 5.51 4.35 59 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 E12_Aa NovelBoundary 0 9.56 8.81 30.90 19.11 3.48 0.00 12.28 0.00 7.41 5.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 2.68 0.00 0.00 4.18 61 ER12a ExonRegion 0 0.39 0.76 0.03 0.03 0.00 0.00 0.26 0.00 0.02 0.00 0.00 3.25 2.11 0.42 7.09 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00