Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HIC2 Gene 0 10.40 28.98 58.23 45.75 39.91 23.19 74.68 64.11 27.97 97.21 20.09 8.31 7.03 22.15 20.68 18.51 14.71 46.35 39.97 38.93 16.85 8.12 9.95 2 302897 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 407464 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 407598 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 443632 Transcript 0 6.15 6.20 21.36 15.86 3.44 8.93 11.91 31.95 16.24 26.81 0.91 3.69 2.85 0.46 7.70 12.94 6.43 50.85 18.79 50.86 6.75 2.10 13.29 6 ER1a ExonRegion 0 0.00 0.35 0.52 0.14 0.00 3.57 0.91 0.18 0.08 0.42 0.66 0.00 1.37 0.00 1.33 0.00 0.00 0.78 4.14 0.30 0.00 0.00 1.89 7 E1a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E3d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E4a NovelJunction 0 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 0.00 1.45 4.37 0.00 0.00 0.00 0.00 0.00 0.00 3.69 4.14 11.95 8.59 0.00 0.00 10 Ix_AR5 ActiveIntronRegion 0 0.00 0.87 7.17 9.30 2.75 3.10 7.20 13.90 7.20 10.47 0.80 0.00 0.54 0.37 2.60 0.41 4.12 21.68 2.65 11.79 3.36 0.00 2.44 11 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E3_Aa NovelBoundary 0 6.52 9.60 22.50 57.60 11.71 4.77 20.40 47.85 17.16 46.69 0.00 26.86 0.00 0.00 4.45 11.02 21.32 46.10 33.41 73.57 6.30 0.00 23.30 14 ER3a ExonRegion 0 6.15 6.20 21.36 15.86 3.44 8.93 11.91 31.95 16.24 26.81 0.91 3.69 2.85 0.46 7.70 12.94 6.43 50.85 18.79 50.86 6.75 2.10 13.29 15 E3_Ab KnownBoundary 0 0.00 2.63 5.77 7.92 0.00 2.78 4.11 14.91 10.27 14.67 2.37 0.00 0.00 0.00 0.00 15.55 0.00 45.31 0.00 28.89 2.66 0.00 0.00 16 E3_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E3_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3b ExonRegion 0 9.52 10.17 14.09 20.44 5.35 11.00 15.23 26.79 21.00 27.53 1.93 0.00 0.00 0.00 5.80 20.80 3.30 65.60 12.74 67.02 2.20 4.17 20.56 19 ER3c ExonRegion 1 8.47 11.18 18.38 21.12 4.01 11.00 15.23 26.79 21.61 30.97 3.87 0.00 7.04 0.00 5.80 23.78 3.30 74.83 12.74 67.02 2.20 4.17 20.56 20 ER3d ExonRegion 0 1.99 8.86 23.51 11.53 0.55 9.30 11.83 20.69 14.33 22.53 8.56 12.15 9.28 6.70 6.60 8.98 3.97 81.51 40.69 35.21 11.94 2.98 32.30 21 E3_Da NovelBoundary 0 0.00 6.58 10.08 11.72 4.33 2.38 9.58 9.57 10.94 10.66 0.00 0.00 6.33 2.71 9.64 4.36 8.51 26.53 35.20 46.66 11.80 2.45 15.37 22 E3a_E4a KnownJunction 0 0.00 0.00 3.08 8.59 0.00 10.56 8.52 19.88 10.16 31.35 18.69 12.60 6.82 16.07 9.15 4.10 8.60 37.85 47.81 21.09 14.33 2.69 0.00 23 ER4a ExonRegion 0 6.69 25.83 42.90 37.88 32.99 21.12 69.07 52.01 26.57 92.01 21.61 8.42 8.27 24.57 19.14 18.55 16.37 46.13 40.35 40.02 18.66 7.68 9.45 24 E4_Da KnownBoundary 1 36.90 126.56 190.29 205.10 275.38 106.53 381.87 218.02 60.07 211.86 31.59 82.38 19.64 42.91 58.47 92.63 18.23 40.38 105.51 52.09 8.28 20.39 23.65 25 ER4b ExonRegion 0 21.18 44.42 107.75 75.84 68.25 33.58 109.98 107.01 37.44 136.56 22.91 9.76 5.67 23.86 29.55 22.31 14.85 50.92 47.60 40.37 16.95 11.39 10.74 26 ER4c ExonRegion 0 0.00 0.00 7.35 6.47 10.03 1.83 2.32 6.05 0.93 4.59 0.00 0.00 0.00 2.03 5.08 1.49 0.83 4.16 0.00 1.60 0.00 0.00 0.00