Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 YDJC Gene 0 22.09 16.02 78.21 30.47 13.30 21.97 20.79 26.59 13.22 40.40 91.61 9.18 14.93 121.86 162.25 85.81 73.23 46.09 38.34 45.72 27.23 12.12 10.33 2 415762 Transcript 0 7.19 9.34 55.56 21.54 7.30 9.60 11.31 14.87 8.48 7.20 69.12 0.00 0.00 85.06 89.50 55.63 13.28 43.28 17.98 32.09 13.28 11.08 8.11 3 292778 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 398873 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 473985 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 468686 Transcript 0 1.41 4.02 30.21 5.59 2.23 6.11 2.74 11.12 5.38 10.09 21.99 2.02 0.05 43.02 66.60 41.48 36.49 15.83 13.31 13.52 8.01 4.24 4.89 7 482998 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 464015 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 2.98 0.46 2.28 0.00 1.58 0.17 1.56 1.65 0.00 2.19 1.32 0.00 0.00 2.88 13.19 14.86 6.45 6.55 2.61 1.26 6.91 0.00 0.00 10 E1_Ad KnownBoundary 0 7.26 6.05 1.42 0.00 4.33 0.00 2.25 2.09 0.00 6.34 5.26 0.00 0.00 7.12 17.80 33.50 9.35 7.46 9.32 16.87 12.48 0.00 3.93 11 E1_Ae KnownBoundary 0 0.00 3.29 0.00 0.00 0.00 0.00 2.25 5.01 0.00 1.61 2.63 0.00 0.00 0.00 0.00 4.27 9.26 5.02 0.00 3.20 0.00 0.00 0.00 12 E1_Af KnownBoundary 0 39.34 15.13 46.21 18.15 3.82 34.53 32.15 28.38 13.95 21.25 41.91 0.00 0.00 41.50 9.89 43.58 25.53 50.90 26.17 28.83 20.94 3.06 21.00 13 ER1b ExonRegion 0 5.50 8.54 8.33 1.64 4.28 4.40 9.80 4.15 0.00 5.28 11.21 0.00 0.00 3.57 30.75 31.50 15.18 13.30 5.73 7.23 12.34 0.00 0.00 14 ER1c ExonRegion 0 24.49 10.46 17.51 5.26 12.23 20.17 21.37 9.63 3.00 9.83 31.75 0.00 0.00 25.06 50.98 57.32 26.88 25.08 17.29 23.71 22.67 0.30 0.84 15 ER1d ExonRegion 0 44.57 18.42 35.10 8.42 15.42 42.29 36.21 20.33 8.28 16.33 59.92 0.00 0.00 67.74 93.35 84.62 43.30 44.02 37.29 41.93 36.43 2.45 11.23 16 ER1e ExonRegion 0 62.44 27.45 48.40 15.67 18.73 62.35 52.30 25.93 14.82 26.38 96.64 0.00 0.00 95.01 152.32 117.40 69.32 66.52 54.15 68.08 51.79 6.25 14.68 17 ER1f ExonRegion 0 34.55 17.90 60.94 15.41 10.42 25.14 24.40 18.43 14.19 29.92 112.80 5.65 3.70 66.15 122.65 76.39 82.46 47.26 38.62 46.49 44.80 5.89 10.32 18 E1_Da KnownBoundary 1 0.00 8.68 35.42 1.83 7.56 13.80 6.58 3.82 11.05 16.52 25.90 5.40 0.00 30.20 47.72 14.70 61.15 19.28 7.53 15.66 5.68 6.12 12.38 19 E1a_E1g KnownJunction 0 10.30 3.35 44.68 16.22 0.00 0.00 2.08 13.64 9.40 24.18 123.93 0.00 0.00 41.14 58.10 47.77 65.92 16.58 17.22 29.66 54.24 2.45 8.62 20 ER1g ExonRegion 0 1.41 4.02 30.21 5.59 2.23 6.11 2.74 11.12 5.38 10.09 21.99 2.02 0.05 43.02 66.60 41.48 36.49 15.83 13.31 13.52 8.01 4.24 4.89 21 E1_Ag KnownBoundary 0 9.26 3.35 44.68 9.66 0.00 0.00 4.11 13.18 1.39 11.90 31.59 12.60 0.00 45.21 68.73 74.60 32.45 29.31 4.42 21.60 9.58 5.51 6.66 22 ER1h ExonRegion 0 8.07 14.75 103.42 29.86 11.73 22.81 23.85 35.95 12.48 45.59 94.69 3.68 5.69 125.32 204.15 98.25 79.76 52.71 59.14 63.48 33.49 15.49 15.44 23 E1_Db KnownBoundary 0 13.19 40.12 122.82 37.59 19.52 43.55 38.55 29.00 18.66 51.95 86.97 0.00 13.64 97.71 115.09 69.81 79.29 52.89 28.80 68.58 26.44 26.64 20.66 24 E1b_E1h KnownJunction 0 2.74 8.81 61.12 20.14 16.64 15.28 28.75 16.39 11.37 24.31 43.80 0.00 0.00 54.39 65.39 43.92 57.32 27.98 21.27 32.66 10.44 12.68 0.00 25 ER1i ExonRegion 0 13.38 20.09 101.04 37.70 20.68 24.71 32.81 41.98 15.74 46.03 89.77 8.15 10.57 130.20 149.24 89.62 68.48 57.81 26.62 62.78 21.10 15.50 23.54 26 E1_Dc KnownBoundary 0 34.01 27.43 89.00 45.88 7.81 22.83 18.59 36.27 12.85 47.25 43.64 7.65 18.83 55.92 136.23 61.86 37.96 41.41 24.75 28.63 14.89 5.14 16.39 27 E1c_E1h KnownJunction 1 7.19 9.34 55.56 21.54 7.30 9.60 11.31 14.87 8.48 7.20 69.12 0.00 0.00 85.06 89.50 55.63 13.28 43.28 17.98 32.09 13.28 11.08 8.11 28 ER1j ExonRegion 0 26.83 15.95 83.50 30.10 8.09 17.19 14.41 31.15 11.27 48.67 44.24 11.65 9.59 83.92 100.75 53.39 61.07 28.48 35.16 34.95 12.04 10.36 6.72 29 E1_Ah KnownBoundary 0 26.75 17.83 74.07 43.32 8.66 24.36 20.84 32.57 21.27 41.82 50.28 18.01 0.00 77.58 100.38 68.27 50.30 29.64 27.11 31.32 17.42 15.98 15.88 30 ER1k ExonRegion 0 35.30 30.15 175.30 60.55 25.41 29.58 31.03 49.01 26.86 72.52 157.15 14.43 16.25 223.47 255.22 150.35 114.76 98.17 56.44 74.02 37.77 20.16 27.38 31 E1_Dd KnownBoundary 0 22.00 12.23 59.13 11.09 11.46 6.64 12.23 15.44 8.97 20.90 12.53 6.30 0.00 55.27 66.51 41.44 31.70 13.06 4.80 14.06 2.53 0.00 0.00 32 E1d_E1i KnownJunction 0 39.04 13.16 126.87 53.44 19.44 18.68 13.34 33.39 15.80 46.18 134.61 12.00 13.64 190.12 205.33 112.19 88.73 67.03 50.64 54.01 31.94 14.76 15.71 33 E1d_E2a KnownJunction 0 0.00 23.35 31.76 10.35 3.48 7.67 19.17 12.32 6.08 29.31 19.74 0.00 0.00 32.84 38.32 18.97 16.64 10.82 4.42 17.90 3.09 0.00 0.00 34 ER1l ExonRegion 0 7.57 6.60 52.57 10.48 6.68 8.71 11.63 15.48 8.79 17.36 19.95 4.11 3.99 53.50 57.88 32.57 18.30 24.68 11.61 22.44 9.23 3.74 2.55 35 E1_Ai KnownBoundary 0 5.85 2.83 60.26 6.96 7.72 13.63 11.57 17.99 6.11 19.42 12.37 5.40 5.84 57.86 60.33 23.33 9.26 19.36 14.02 29.21 2.72 6.25 7.26 36 ER1m ExonRegion 0 24.14 12.32 100.87 39.05 8.72 17.88 13.56 27.65 15.64 48.71 119.82 12.69 21.73 166.89 219.05 112.89 71.02 50.33 38.33 55.01 33.49 16.53 8.99 37 E1e_E2a KnownJunction 0 19.78 31.38 81.69 44.72 4.33 34.87 16.47 20.82 20.60 44.46 128.14 0.00 34.09 158.04 152.42 97.32 60.03 92.15 30.21 49.54 24.46 8.39 10.84 38 E2_Aa NovelBoundary 0 12.59 9.41 17.36 7.56 7.56 5.34 6.58 2.51 1.79 6.42 4.32 0.00 0.00 16.48 43.51 12.82 7.29 5.06 4.71 11.82 3.15 3.12 0.00 39 ER2a ExonRegion 0 25.68 18.85 72.69 37.55 17.96 27.55 25.03 27.17 13.95 45.32 110.32 12.30 25.25 150.85 195.31 97.51 89.24 49.96 44.07 48.17 29.63 14.58 9.65 40 E2_Da KnownBoundary 0 32.15 21.64 12.63 9.92 23.26 21.52 24.20 12.73 0.00 13.62 40.85 5.70 6.49 13.71 43.27 44.01 36.09 6.55 3.95 0.00 8.03 2.63 3.24 41 ER2b ExonRegion 0 16.40 6.10 0.00 0.00 0.00 0.46 4.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER2c ExonRegion 0 12.41 4.62 0.00 0.00 0.00 0.00 2.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER2d ExonRegion 0 1.41 0.00 0.00 0.00 0.00 0.00 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00