Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC002472.2 Gene 0 7.36 15.14 29.12 19.47 23.38 13.45 23.50 42.20 38.90 47.52 2.34 2.55 4.47 2.90 4.15 6.49 5.32 44.10 32.96 25.76 7.66 4.90 10.02 2 292748 Transcript 0 1.24 4.95 4.28 4.21 6.45 0.92 5.37 37.05 31.33 28.74 1.85 3.69 0.00 2.78 2.48 2.00 1.25 24.17 13.81 28.99 3.95 2.80 3.44 3 422086 Transcript 0 14.38 25.45 44.48 34.31 35.47 18.88 28.75 53.98 52.86 69.13 5.57 5.22 11.19 6.83 9.20 14.85 11.33 65.24 56.34 37.11 10.43 10.09 18.61 4 442739 Transcript 0 1.14 0.73 2.14 2.56 2.65 1.16 1.91 3.48 3.65 1.55 0.00 1.24 1.39 1.48 1.37 0.00 2.08 2.07 3.73 1.73 0.40 0.38 0.53 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.96 6 ER1b ExonRegion 0 2.23 7.12 22.11 9.29 20.00 18.85 24.98 39.87 43.29 57.18 1.94 0.09 0.00 0.85 0.41 1.50 1.00 55.65 33.34 30.99 4.76 1.18 5.45 7 E1a_E2a KnownJunction 0 3.78 6.64 5.94 3.76 11.63 2.67 7.73 46.91 44.18 40.00 2.68 6.30 0.00 7.36 0.00 0.00 0.00 28.93 13.74 41.61 5.25 8.94 4.35 8 E1a_E3a KnownJunction 0 0.00 2.76 26.76 8.82 4.24 8.12 0.00 21.15 35.39 52.57 2.68 0.00 0.00 2.47 0.00 0.00 0.00 45.93 52.14 20.65 0.00 2.94 0.00 9 E1a_E4a NovelJunction 0 0.00 0.00 9.40 3.86 7.56 0.00 0.00 7.15 7.32 35.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.34 4.61 2.81 0.00 0.00 0.00 10 ER2a ExonRegion 0 1.17 7.25 8.40 6.88 7.45 1.01 7.56 50.72 47.01 38.47 2.28 2.15 0.00 1.47 1.03 3.66 0.88 36.70 28.98 38.10 5.24 2.26 3.27 11 E2_Da NovelBoundary 0 0.00 0.00 7.33 0.00 0.00 2.56 4.06 2.55 5.38 9.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.07 0.00 8.50 0.00 0.00 4.35 12 E2a_E3a KnownJunction 0 0.00 5.92 2.78 6.19 6.71 0.00 6.18 50.56 34.11 36.51 2.42 6.30 0.00 2.30 8.90 4.36 4.11 31.05 12.52 36.24 5.31 0.00 4.18 13 E3_Aa NovelBoundary 0 0.00 3.22 5.09 3.10 0.00 2.73 0.00 2.51 5.87 10.15 0.00 0.00 0.00 0.00 0.00 3.42 0.00 9.82 0.00 18.09 2.90 0.00 0.00 14 ER3a ExonRegion 0 1.56 6.50 28.76 9.64 5.69 9.58 5.92 39.15 44.50 56.02 1.31 1.11 0.00 1.22 1.93 1.87 1.48 61.74 48.44 27.84 10.09 3.76 2.92 15 E3a_E4a KnownJunction 0 0.00 19.47 43.43 20.14 7.47 19.70 2.38 51.10 70.51 73.57 2.90 0.00 0.00 0.00 4.57 0.00 4.77 88.92 74.64 32.47 22.61 0.00 4.35 16 E4_Aa NovelBoundary 0 0.00 5.99 13.13 25.64 8.40 7.55 5.61 31.75 24.10 26.03 2.63 0.00 7.63 0.00 0.00 3.59 9.35 34.99 27.29 15.28 2.78 0.00 11.87 17 ER4a ExonRegion 0 3.24 8.80 13.58 5.94 10.92 7.94 15.45 15.50 14.19 20.84 0.15 0.27 0.00 0.30 0.40 0.70 0.61 18.59 13.49 7.11 2.86 1.14 3.17 18 E4_Da KnownBoundary 0 3.33 6.71 103.46 54.54 47.03 16.01 16.34 102.48 67.07 89.56 0.00 0.00 0.00 0.00 0.00 7.01 0.00 59.57 88.94 23.65 10.93 16.17 20.06 19 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4b ExonRegion 0 3.40 19.00 96.70 50.29 37.99 10.85 32.04 105.85 90.67 108.01 1.36 0.18 0.13 0.48 0.08 2.01 1.44 61.11 71.60 38.93 12.42 10.27 9.22 21 E4_Db KnownBoundary 0 14.22 40.52 128.47 62.23 78.01 33.33 53.66 161.79 107.23 103.07 2.42 0.00 0.00 0.00 0.00 0.00 3.93 72.05 42.07 53.18 19.77 10.65 7.85 22 ER4c ExonRegion 0 28.75 48.15 62.20 59.80 66.69 29.63 57.51 86.81 70.33 85.68 8.45 10.44 22.38 11.20 18.40 29.71 22.66 84.56 60.54 53.58 20.87 17.24 37.21 23 E4_Dc NovelBoundary 0 6.59 35.65 5.88 8.92 68.93 18.68 43.99 23.29 17.65 23.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.81 65.32 21.73 5.93 5.63 0.00 24 Ix Intron 0 9.05 30.43 59.61 43.21 68.93 26.16 42.29 84.80 72.32 78.61 1.21 4.28 2.26 1.28 1.93 2.63 0.86 42.96 56.72 38.95 2.99 3.15 7.27 25 Ix_SR4 SilentIntronRegion 0 11.39 59.95 58.69 65.34 138.44 35.21 93.74 92.14 77.12 101.38 0.00 1.15 2.49 1.83 1.32 0.43 1.07 35.19 68.04 44.88 3.07 3.36 8.51 26 Ix_AR4 ActiveIntronRegion 0 22.51 106.67 84.55 62.32 134.27 38.18 99.54 129.63 84.66 102.80 0.00 0.00 0.00 1.62 0.00 2.97 1.20 53.08 64.00 46.61 6.61 1.70 9.61 27 Ix_AR3 ActiveIntronRegion 0 15.20 51.26 93.71 65.97 101.09 39.37 59.08 129.49 113.79 119.60 1.39 3.60 2.43 2.17 1.37 3.02 0.56 64.44 86.24 59.84 5.35 5.02 8.25 28 Ix_SR3 SilentIntronRegion 0 5.02 13.11 39.99 29.27 36.27 11.48 19.34 47.87 35.77 44.72 0.55 0.00 0.73 0.15 1.05 2.25 0.31 19.52 24.76 20.37 1.67 2.17 3.34 29 Ix_AR2 ActiveIntronRegion 0 7.89 22.44 55.34 38.12 60.87 25.68 41.13 88.31 79.86 83.64 2.32 11.31 3.89 1.64 3.46 3.97 1.88 56.79 64.66 41.81 2.51 2.37 9.92 30 Ix_SR2 SilentIntronRegion 0 5.10 15.64 44.92 21.08 42.08 29.95 22.14 71.97 56.98 46.79 0.93 7.13 3.31 0.06 3.68 2.23 0.00 34.90 48.51 28.63 1.47 2.78 11.09 31 E5_Aa NovelBoundary 0 12.82 71.76 73.95 56.94 152.80 36.74 51.14 142.03 90.19 97.54 2.21 5.85 0.00 2.35 5.19 3.50 11.50 39.46 91.96 34.07 8.15 14.57 8.71 32 ER5a ExonRegion 0 2.29 1.46 4.28 5.12 5.30 2.31 3.82 6.96 7.30 3.09 0.00 2.48 2.78 2.96 2.74 0.00 4.16 4.14 7.46 3.46 0.79 0.75 1.06