Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATP6V1E1 Gene 0 163.43 184.28 142.48 174.08 183.46 192.26 189.89 144.00 172.22 144.97 194.18 208.74 121.30 209.67 263.36 180.27 181.14 158.70 146.07 133.61 193.09 247.76 212.35 2 253413 Transcript 0 11.98 13.65 4.67 5.19 29.26 16.45 25.28 3.03 5.36 4.82 3.95 1.57 3.57 10.40 10.43 5.61 5.35 4.60 5.56 6.79 14.86 6.42 11.43 3 460085 Transcript 0 5.12 0.44 0.49 1.03 6.05 0.41 5.18 2.04 0.73 1.47 0.11 0.00 3.71 0.69 1.33 2.64 1.43 0.60 0.00 4.45 0.00 0.90 0.71 4 399798 Transcript 0 2.96 0.00 2.87 2.06 0.00 0.00 0.00 0.00 4.66 6.82 14.42 0.00 0.00 0.00 0.00 3.67 0.00 2.03 0.00 5.94 8.34 0.00 0.00 5 478963 Transcript 1 5.94 3.38 1.60 9.67 6.73 2.02 10.68 2.70 2.78 6.48 0.64 11.30 16.32 1.19 3.62 6.89 6.70 1.02 6.74 5.61 0.95 1.96 7.98 6 399796 Transcript 0 13.63 5.79 1.66 3.46 4.07 10.62 12.19 4.89 2.66 2.79 2.53 12.60 6.49 2.12 8.90 0.00 8.60 10.69 3.67 12.40 0.00 2.82 0.00 7 413576 Transcript 0 5.98 5.49 2.13 0.04 5.32 3.02 7.19 1.44 4.41 0.33 1.49 4.14 2.94 0.71 3.28 4.38 3.61 2.15 7.11 7.84 2.41 3.40 10.10 8 484653 Transcript 0 8.68 3.90 6.58 10.50 11.66 1.82 12.46 7.76 9.37 3.27 4.31 11.57 5.26 6.18 5.01 12.20 7.05 3.18 3.01 3.75 3.63 7.94 4.23 9 481365 Transcript 0 3.54 3.79 5.92 12.82 5.20 6.73 9.54 8.55 2.33 5.98 2.55 1.73 3.06 5.97 6.99 9.22 4.81 7.07 2.34 3.76 6.59 4.74 5.95 10 473248 Transcript 0 35.53 13.82 11.54 16.35 22.77 9.38 24.71 13.28 10.57 10.93 6.77 8.86 9.84 7.83 18.33 11.77 10.57 7.85 8.64 10.30 9.90 12.27 12.12 11 ER1a ExonRegion 0 20.11 16.65 3.76 6.95 23.01 28.79 35.92 3.28 6.49 3.97 5.80 0.00 0.47 17.01 14.71 9.43 9.01 5.23 3.59 10.03 26.44 4.26 16.28 12 E1_Ab KnownBoundary 0 0.00 0.00 0.00 2.00 7.64 2.21 5.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.54 0.00 0.00 13 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1_Ad KnownBoundary 0 0.00 0.00 1.57 3.86 8.49 2.90 4.42 2.30 0.00 1.56 2.58 0.00 0.00 0.00 0.00 0.00 0.00 4.56 0.00 0.00 6.18 0.00 4.35 15 E1_Ae KnownBoundary 1 301.61 279.56 36.90 82.01 336.59 543.66 631.26 50.52 74.85 68.28 138.19 12.60 13.31 245.40 180.60 172.35 143.15 119.18 142.97 140.49 176.00 142.37 347.00 16 ER1b ExonRegion 0 99.48 83.38 17.16 28.62 120.41 166.88 191.97 22.47 27.17 19.50 34.79 0.00 4.69 105.57 72.53 56.47 36.31 31.41 19.11 51.06 101.37 27.09 96.91 17 ER1c ExonRegion 1 107.94 89.48 19.61 29.98 123.08 181.55 197.27 22.47 27.17 20.64 40.59 0.00 4.69 105.57 81.24 56.47 36.31 35.11 22.30 51.06 105.78 31.25 102.78 18 ER1d ExonRegion 1 271.07 247.66 38.07 84.40 282.67 489.10 520.88 56.42 76.14 70.04 151.59 7.73 8.04 332.48 232.10 209.53 153.96 152.70 122.86 133.28 223.05 127.99 341.70 19 ER1e ExonRegion 1 464.41 403.40 133.14 158.24 596.07 840.92 700.67 162.12 215.68 175.90 300.77 36.20 60.57 429.03 306.06 364.45 325.06 346.55 273.26 226.35 402.84 278.45 595.87 20 E1a_E2b KnownJunction 1 96.91 103.53 97.90 91.80 36.08 40.60 37.85 89.75 162.27 157.55 347.72 124.24 192.68 115.08 124.48 56.22 308.18 49.25 21.27 87.57 499.04 83.40 50.11 21 E1a_E4a KnownJunction 0 2.96 0.00 2.87 2.06 0.00 0.00 0.00 0.00 4.66 6.82 14.42 0.00 0.00 0.00 0.00 3.67 0.00 2.03 0.00 5.94 8.34 0.00 0.00 22 ER2a ExonRegion 1 22.58 30.50 36.35 36.34 8.03 23.23 13.24 35.15 59.29 50.08 126.28 51.95 67.22 40.06 44.49 18.82 124.33 21.56 12.74 35.46 167.48 43.75 20.56 23 ER2b ExonRegion 1 165.67 177.02 206.18 260.84 57.18 84.69 66.18 230.02 356.47 289.13 618.38 322.38 221.15 534.79 423.54 214.91 591.88 250.33 221.26 303.27 588.42 495.04 323.98 24 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 2.11 0.00 0.00 0.00 0.00 4.36 0.00 2.40 0.00 0.00 0.00 0.00 0.00 25 E2a_E4a KnownJunction 0 350.43 261.99 383.72 488.22 118.59 101.02 128.34 413.62 582.63 445.56 551.03 240.68 211.51 1321.63 852.09 561.48 518.28 549.51 598.04 482.38 349.41 1119.96 812.32 26 E3_Aa NovelBoundary 1 270.79 241.34 207.12 202.94 273.77 199.32 304.99 213.63 261.48 165.25 97.87 107.44 161.68 101.01 109.90 247.80 241.89 342.65 260.90 343.17 167.54 92.83 253.53 27 ER3a ExonRegion 0 14.23 16.46 1.85 0.12 15.97 9.05 21.56 4.32 6.58 0.99 2.36 6.26 8.83 2.14 9.85 8.79 10.82 4.05 16.54 20.26 7.24 10.20 25.96 28 E3_Da NovelBoundary 0 18.82 80.12 13.22 9.02 29.71 21.69 84.00 16.80 14.00 19.15 6.79 11.70 13.80 11.54 4.33 15.55 20.20 22.34 16.57 48.07 8.40 8.45 7.51 29 E3a_E4a KnownJunction 0 3.70 0.00 4.55 0.00 0.00 0.00 0.00 0.00 4.25 0.00 0.00 6.15 0.00 0.00 0.00 0.00 0.00 0.00 4.80 3.26 0.00 0.00 4.35 30 ER4a ExonRegion 0 265.47 447.74 337.69 430.36 598.69 424.01 425.09 360.18 517.21 398.43 504.12 520.40 388.42 567.25 670.19 618.26 427.35 451.49 452.78 393.29 282.42 749.61 882.78 31 E4_Da KnownBoundary 0 16.15 0.00 4.58 1.90 4.33 0.00 0.00 5.67 1.27 2.31 2.32 0.00 6.49 2.47 0.00 8.72 0.00 0.00 0.00 2.75 0.00 0.00 3.16 32 E4a_E5a KnownJunction 0 546.69 887.14 385.11 516.38 1663.75 1466.71 1480.20 372.09 584.83 436.43 630.79 780.85 536.33 425.81 740.34 362.55 517.72 305.72 322.93 385.87 384.56 876.37 399.67 33 ER4b ExonRegion 0 5.12 0.44 0.49 1.03 6.05 0.41 5.18 2.04 0.73 1.47 0.11 0.00 3.71 0.69 1.33 2.64 1.43 0.60 0.00 4.45 0.00 0.90 0.71 34 ER5a ExonRegion 0 342.24 1045.62 451.32 534.82 1075.61 1550.98 1445.61 378.92 591.31 472.73 683.70 1172.96 754.05 522.87 745.49 337.85 552.28 310.31 374.54 415.46 453.21 897.16 415.47 35 E5_Da KnownBoundary 0 53.79 6.25 4.05 20.41 22.92 19.87 47.03 0.00 5.41 13.38 2.53 18.91 27.27 2.47 14.71 0.00 12.90 3.90 19.77 18.41 5.93 5.57 7.51 36 E5a_E6a KnownJunction 1 468.45 1386.20 464.29 501.63 465.20 696.76 982.97 407.78 497.30 428.69 604.68 1401.01 504.19 525.22 794.61 321.54 491.82 263.56 331.59 438.22 412.73 763.15 370.22 37 E5a_E7a KnownJunction 0 13.63 5.79 1.66 3.46 4.07 10.62 12.19 4.89 2.66 2.79 2.53 12.60 6.49 2.12 8.90 0.00 8.60 10.69 3.67 12.40 0.00 2.82 0.00 38 ER5b ExonRegion 0 5.94 3.38 1.60 9.67 6.73 2.02 10.68 2.70 2.78 6.48 0.64 11.30 16.32 1.19 3.62 6.89 6.70 1.02 6.74 5.61 0.95 1.96 7.98 39 ER6a ExonRegion 0 618.94 699.71 464.77 602.47 480.24 503.70 511.34 435.76 553.45 459.05 594.13 1071.16 507.51 536.84 620.58 449.29 574.39 392.85 343.67 407.78 531.98 865.49 491.82 40 E6_Da KnownBoundary 0 16.74 3.35 0.00 16.91 17.06 0.00 19.39 6.33 5.15 10.53 2.21 6.30 0.00 7.06 9.64 29.05 4.39 0.00 11.20 2.75 14.09 11.39 4.35 41 E6a_E7a KnownJunction 1 879.71 519.51 538.42 678.00 451.70 392.22 338.11 476.21 578.52 491.22 605.26 1290.87 821.70 656.55 883.99 639.06 554.37 513.15 413.09 445.37 613.94 1044.58 697.67 42 ER6b ExonRegion 0 8.68 3.90 6.58 10.50 11.66 1.82 12.46 7.76 9.37 3.27 4.31 11.57 5.26 6.18 5.01 12.20 7.05 3.18 3.01 3.75 3.63 7.94 4.23 43 ER7a ExonRegion 1 563.45 567.69 473.99 617.15 401.13 337.68 388.80 439.70 511.98 466.34 591.80 1275.56 692.22 714.73 942.07 622.25 539.00 570.10 466.82 462.93 582.58 892.80 682.96 44 E7_Da NovelBoundary 0 151.06 24.73 10.38 19.24 32.09 0.00 33.21 32.33 12.93 11.15 12.95 30.01 32.47 4.59 13.35 40.76 12.90 8.87 29.65 11.63 17.17 13.53 27.91 45 E7a_E8a KnownJunction 0 794.36 859.52 523.43 701.94 603.82 466.55 675.25 476.75 553.03 497.81 626.00 1064.90 388.61 649.89 1162.50 584.89 666.48 508.84 618.56 513.64 715.94 865.23 691.27 46 ER8a ExonRegion 0 477.11 726.27 466.75 582.93 581.31 561.39 668.43 461.35 515.24 467.92 613.97 1061.90 414.01 647.66 757.07 538.92 569.53 493.82 413.46 401.14 640.98 752.06 578.27 47 E8_Da KnownBoundary 0 7.04 6.51 15.46 28.43 15.96 10.05 12.37 11.34 10.16 13.22 7.58 5.70 0.00 9.95 6.06 3.85 4.77 5.80 3.95 5.62 2.90 3.12 4.10 48 E8a_E9b KnownJunction 0 450.23 935.36 341.53 589.27 750.26 567.40 594.52 456.87 537.23 494.66 476.38 602.75 214.92 656.60 822.30 488.50 417.20 440.03 306.64 392.96 525.54 613.19 614.53 49 ER8b ExonRegion 0 3.54 3.79 5.92 12.82 5.20 6.73 9.54 8.55 2.33 5.98 2.55 1.73 3.06 5.97 6.99 9.22 4.81 7.07 2.34 3.76 6.59 4.74 5.95 50 E9_Aa NovelBoundary 0 34.23 41.31 76.14 70.99 26.66 33.45 67.04 70.44 50.64 58.77 4.42 29.71 38.15 11.95 17.18 39.73 34.41 121.17 7.72 14.25 22.61 25.11 37.22 51 ER9a ExonRegion 0 35.53 13.82 11.54 16.35 22.77 9.38 24.71 13.28 10.57 10.93 6.77 8.86 9.84 7.83 18.33 11.77 10.57 7.85 8.64 10.30 9.90 12.27 12.12 52 E9_Ab KnownBoundary 0 28.60 18.15 10.08 15.68 31.24 36.06 26.63 13.35 10.68 10.72 4.32 5.85 0.00 2.47 4.45 3.76 0.00 8.08 0.00 3.26 9.39 15.25 4.18 53 ER9b ExonRegion 0 544.96 904.07 471.12 594.82 743.68 669.07 625.32 513.67 557.45 486.47 631.15 727.46 439.40 773.06 958.92 792.98 600.25 636.87 559.05 445.48 669.58 926.65 796.75 54 E9_Da NovelBoundary 0 226.48 336.78 314.18 338.78 338.37 301.81 218.47 292.45 288.28 268.14 293.44 256.73 111.03 297.66 358.49 425.36 257.32 334.57 299.02 216.81 317.35 418.10 367.57 55 E9b_E10a KnownJunction 0 510.16 505.96 616.36 588.17 516.72 454.11 484.46 504.96 542.64 524.53 588.41 415.04 176.61 786.87 1075.10 671.53 563.53 584.24 557.47 424.67 583.55 895.17 730.62 56 ER9c ExonRegion 0 394.10 500.06 546.88 551.97 479.49 485.96 400.37 476.36 515.29 494.43 624.91 493.13 212.46 760.74 1014.28 721.33 566.10 632.48 583.56 399.57 610.43 894.87 741.80 57 ER10a ExonRegion 1 432.05 356.32 447.87 472.02 329.75 307.22 328.69 443.12 498.46 443.36 569.47 336.23 113.18 646.54 741.87 540.80 577.17 515.79 421.97 318.71 624.27 629.22 580.42 58 E10_Da KnownBoundary 0 951.72 413.08 414.09 527.47 419.02 275.81 417.69 478.39 487.38 418.16 484.54 375.12 188.79 587.62 791.77 529.26 479.20 426.97 438.13 333.07 671.15 626.91 554.95 59 ER10b ExonRegion 0 352.30 315.89 415.01 481.87 348.54 383.62 344.31 434.64 466.69 386.31 514.89 313.19 190.31 540.04 807.70 467.30 482.45 441.29 403.68 333.37 565.25 606.70 516.91 60 E10_Db KnownBoundary 0 152.77 182.60 320.60 394.89 164.69 136.29 153.02 341.12 388.16 281.43 339.40 275.34 163.63 352.99 802.40 308.47 232.82 286.11 320.20 293.19 370.97 426.80 318.83 61 ER10c ExonRegion 0 238.52 155.25 196.52 231.48 151.77 141.81 128.22 183.92 222.36 184.52 219.97 184.00 138.67 245.51 396.58 185.50 169.01 165.40 194.57 163.90 233.32 318.67 199.81 62 E10_Dc KnownBoundary 0 14.89 27.03 22.62 11.75 114.43 20.44 60.72 19.18 18.29 18.37 4.79 7.65 44.96 13.77 23.49 4.10 8.23 17.49 18.92 16.55 10.56 27.74 18.18 63 ER10d ExonRegion 0 3.85 10.66 5.57 3.43 35.51 4.11 14.64 2.78 4.23 5.67 2.11 3.15 6.68 3.79 6.15 1.80 1.70 3.98 7.53 3.55 3.27 8.59 6.59 64 IG9 Intergenic 0 6.95 18.84 16.17 10.36 10.51 4.62 11.64 9.66 14.03 8.22 3.40 4.34 3.19 3.20 7.07 7.32 5.42 5.34 10.83 10.10 5.94 8.67 10.85 65 IG9_SR1 SilentIntergenicRegion 0 10.95 31.19 6.75 8.63 9.39 3.73 13.70 8.09 15.64 9.16 5.71 7.44 8.62 2.53 10.88 3.30 7.93 7.30 15.87 11.01 10.16 12.70 9.77 66 IG9_AR1 ActiveIntergenicRegion 0 5.11 13.14 20.61 11.20 11.07 5.06 10.72 10.43 13.32 7.81 2.33 2.92 0.67 3.52 5.32 9.22 4.27 4.44 8.51 9.71 3.99 6.82 11.38