Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SEZ6L Gene 0 17.52 315.19 139.57 161.53 300.58 272.13 202.75 522.28 464.25 327.90 0.00 0.05 0.00 0.00 0.00 0.00 0.00 329.68 740.23 193.46 0.53 4.73 1.13 2 404234 Transcript 0 0.00 2.83 0.00 0.00 4.50 23.17 10.66 8.56 5.78 6.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53.00 38.38 11.99 0.00 2.85 0.00 3 398184 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.12 0.08 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 422412 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 411842 Transcript 0 0.00 9.41 1.51 3.10 3.48 16.13 10.51 11.25 3.18 5.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.56 40.28 2.49 0.00 0.00 0.00 6 360929 Transcript 0 11.93 201.41 85.61 101.12 202.50 169.67 123.23 293.03 241.77 171.72 0.00 0.02 0.00 0.00 0.00 0.00 0.00 95.11 311.44 75.26 0.06 1.40 0.29 7 248933 Transcript 0 6.96 85.31 58.81 58.40 84.55 132.65 46.99 220.03 281.54 174.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 199.47 512.58 111.86 0.00 0.00 0.00 8 343706 Transcript 0 0.00 8.95 8.10 3.70 0.00 0.00 0.00 16.80 7.06 33.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.97 49.60 20.65 0.00 0.00 0.00 9 403121 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 402979 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 483291 Transcript 0 1.89 35.70 4.78 15.41 9.95 13.09 17.77 32.75 11.92 12.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.37 60.07 15.14 0.00 0.00 0.00 12 494013 Transcript 0 0.17 7.59 1.90 5.66 5.86 6.44 10.00 13.76 19.89 9.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.86 20.67 16.24 0.00 0.17 0.00 13 ER1a ExonRegion 0 0.00 2.83 0.00 0.00 4.50 23.17 10.66 8.56 5.78 6.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53.00 38.38 11.99 0.00 2.85 0.00 14 E1_Ab KnownBoundary 0 0.00 14.47 1.15 1.23 11.88 64.51 26.54 30.52 25.26 33.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 164.65 97.51 37.90 0.00 8.76 0.00 15 ER1b ExonRegion 0 0.00 3.63 1.29 0.00 7.37 32.02 12.09 19.83 12.92 19.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70.49 52.85 14.72 0.00 1.57 0.00 16 E1_Ac KnownBoundary 0 0.00 2.83 2.84 1.56 4.33 20.84 4.20 24.11 14.03 19.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45.97 20.14 8.37 0.00 0.00 0.00 17 ER1c ExonRegion 0 0.00 8.23 6.23 0.00 3.16 18.56 8.39 15.56 11.38 15.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.58 56.34 19.51 0.00 0.00 0.00 18 E1_Ad KnownBoundary 0 0.00 3.35 16.41 1.63 4.24 10.62 6.76 44.48 47.97 36.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66.82 112.38 54.14 0.00 0.00 0.00 19 ER1d ExonRegion 0 0.00 5.44 20.15 4.87 4.74 12.54 5.27 55.97 73.04 72.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 143.70 162.36 67.66 0.00 3.47 1.43 20 E1a_E2b KnownJunction 0 0.00 14.73 29.89 15.95 10.36 13.00 5.96 119.61 134.95 115.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 351.52 296.86 106.68 0.00 9.25 0.00 21 I1_SR2 SilentIntronRegion 0 2.53 61.53 21.19 32.98 55.26 19.51 53.47 67.06 29.52 33.23 0.00 0.10 0.00 0.00 0.00 0.00 0.00 43.36 76.36 31.38 0.06 0.31 0.22 22 I1_AR2 ActiveIntronRegion 0 1.03 50.72 17.11 27.30 54.40 16.11 61.71 103.68 49.16 50.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78.65 123.18 53.46 0.00 0.59 0.42 23 I1_SR3 SilentIntronRegion 0 1.37 42.82 9.99 20.98 41.78 19.32 62.61 69.77 38.22 39.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.74 82.25 39.53 0.00 0.15 0.42 24 I1_AR3 ActiveIntronRegion 0 5.11 79.72 33.63 42.25 72.68 22.15 63.82 97.43 37.22 42.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.28 78.96 30.86 0.13 0.18 0.43 25 I1_SR4 SilentIntronRegion 0 4.84 53.76 25.25 33.46 36.91 11.66 44.07 72.01 32.46 33.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.13 83.15 22.24 0.00 0.31 0.00 26 I1_AR4 ActiveIntronRegion 0 3.52 57.69 24.09 42.21 53.14 21.22 49.18 87.16 34.54 37.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64.70 83.99 29.29 0.43 0.44 0.00 27 ER2a ExonRegion 0 0.00 0.70 2.53 0.95 1.99 1.28 4.89 8.37 5.66 3.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.27 21.44 6.53 0.00 0.07 0.00 28 E2_Ab KnownBoundary 0 0.00 0.00 2.99 5.36 3.57 0.00 9.94 17.37 5.76 4.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.63 36.05 6.01 0.00 0.00 0.00 29 ER2b ExonRegion 0 1.75 45.51 58.62 46.66 32.08 99.79 61.24 267.89 313.25 278.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 494.50 795.79 204.45 1.21 10.23 1.83 30 E2a_E3a KnownJunction 0 0.00 60.38 98.28 73.85 78.27 169.73 90.31 486.81 572.88 482.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 838.15 750.99 221.92 0.00 3.06 0.00 31 ER3a ExonRegion 0 3.21 74.89 78.83 57.66 60.70 131.21 98.15 365.50 460.34 338.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 659.12 1140.72 305.78 0.51 18.24 2.48 32 E3a_E4a KnownJunction 0 0.00 48.81 88.67 70.42 35.31 100.06 103.78 319.68 399.45 306.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 531.43 815.74 250.04 5.50 2.51 3.76 33 ER4a ExonRegion 0 1.11 59.05 72.70 52.28 40.07 125.12 72.01 299.23 350.46 279.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 571.16 781.21 238.73 1.98 7.54 3.38 34 E4a_E5a KnownJunction 0 0.00 83.87 49.67 64.23 63.07 191.65 86.87 349.05 351.47 265.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 674.03 967.09 291.59 0.00 3.12 4.35 35 ER5a ExonRegion 0 0.83 74.15 61.37 52.24 50.65 125.38 76.85 237.04 280.20 214.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 445.78 636.63 215.85 2.36 2.58 1.12 36 E5a_E6a KnownJunction 0 3.78 123.33 78.41 83.61 91.68 146.17 66.20 304.69 371.55 265.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 658.45 851.22 297.53 6.30 0.00 0.00 37 ER6a ExonRegion 0 1.03 84.77 76.16 74.77 76.58 162.35 84.92 325.88 381.89 278.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 487.23 743.26 277.99 0.74 1.92 0.00 38 E6a_E7a KnownJunction 0 0.00 81.83 81.04 79.01 59.85 84.16 54.01 370.49 425.11 295.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 491.06 627.88 244.23 0.00 0.00 0.00 39 ER7a ExonRegion 0 3.61 81.49 78.09 93.55 66.59 138.45 83.70 412.08 460.29 366.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 569.47 864.21 285.49 1.43 4.45 2.83 40 E7a_E8a KnownJunction 0 3.33 118.93 89.17 68.06 123.01 102.78 111.47 382.81 422.59 319.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 431.20 731.50 225.37 2.53 0.00 3.33 41 ER8a ExonRegion 0 4.05 113.76 66.16 80.51 113.12 205.08 126.18 376.89 418.22 310.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 558.50 829.17 235.98 1.08 5.03 3.99 42 E8a_E9a KnownJunction 0 3.70 100.25 83.02 82.04 145.08 190.69 139.11 424.91 467.10 350.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 628.81 952.97 254.58 0.00 8.70 4.01 43 ER9a ExonRegion 0 5.66 99.26 91.74 85.10 115.23 166.98 122.23 394.90 460.16 331.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 490.19 989.25 243.12 0.81 6.22 1.77 44 E9a_E10a KnownJunction 0 2.89 170.23 106.21 90.36 181.92 177.06 178.42 479.13 569.87 425.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 536.70 1237.40 337.29 0.00 8.57 0.00 45 ER10a ExonRegion 0 5.33 162.08 103.75 106.82 105.67 223.98 131.30 544.09 554.95 404.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 648.41 1171.97 272.03 0.57 6.81 1.79 46 E10a_E11a KnownJunction 0 0.00 298.37 117.62 128.89 82.77 262.63 121.45 681.58 575.46 483.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 621.43 1472.98 332.24 0.00 6.18 4.35 47 ER11a ExonRegion 0 2.80 287.14 110.78 121.57 136.99 231.37 149.87 559.99 528.07 416.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 618.89 1034.57 244.14 1.37 3.81 1.36 48 E11_Ab KnownBoundary 0 10.96 238.90 116.23 133.95 181.92 232.99 212.51 514.49 514.23 355.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 585.49 1095.56 168.81 2.41 3.06 0.00 49 ER11b ExonRegion 0 9.76 195.50 128.43 151.40 116.57 209.69 120.85 556.90 532.57 412.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 576.65 983.64 226.11 0.71 5.19 1.92 50 E11a_E12a KnownJunction 0 6.67 271.27 147.60 205.20 162.99 179.90 186.15 671.36 657.31 452.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 640.41 1633.36 334.48 3.03 8.57 3.93 51 E11a_E14a KnownJunction 0 0.00 14.60 1.71 3.60 0.00 10.22 2.25 12.08 23.50 11.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 27.67 6.33 0.00 0.00 0.00 52 ER12a ExonRegion 0 5.03 234.76 130.87 155.05 118.07 225.04 130.78 532.89 560.03 417.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 452.47 790.40 245.29 0.21 6.11 0.96 53 E12_Da KnownBoundary 0 3.33 19.86 7.04 13.32 20.20 13.51 32.28 30.85 22.19 11.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46.39 77.84 6.26 0.00 0.00 0.00 54 E12a_E14a KnownJunction 0 5.93 276.46 100.29 103.58 60.02 214.42 86.16 453.29 471.20 299.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 368.89 652.82 208.11 0.00 5.94 3.41 55 E12a_E15a NovelJunction 0 0.00 17.69 12.12 17.68 11.71 13.69 4.24 32.57 18.84 18.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58.28 96.29 20.45 0.00 0.00 0.00 56 E12a_E16a KnownJunction 0 0.00 8.95 8.10 3.70 0.00 0.00 0.00 16.80 7.06 33.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.97 49.60 20.65 0.00 0.00 0.00 57 E12a_E16b KnownJunction 0 0.00 0.00 1.83 7.42 7.30 0.00 0.00 0.00 2.72 3.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 0.00 58 ER12b ExonRegion 0 1.89 35.70 4.78 15.41 9.95 13.09 17.77 32.75 11.92 12.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.37 60.07 15.14 0.00 0.00 0.00 59 E12_Db NovelBoundary 0 16.15 61.11 4.91 45.32 4.33 15.22 29.63 61.94 23.41 25.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.11 97.32 17.45 0.00 0.00 0.00 60 ER13a ExonRegion 0 0.52 10.47 2.67 4.48 13.75 5.40 19.85 13.26 11.27 7.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.13 35.18 14.09 0.00 0.51 0.00 61 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER14a ExonRegion 0 4.31 167.32 102.34 109.80 103.45 204.86 114.15 399.99 446.83 298.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 375.03 648.54 184.79 0.00 3.72 0.14 63 E14a_E15a KnownJunction 0 3.33 156.68 70.28 69.69 59.68 188.93 131.21 317.34 321.67 206.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 372.96 914.47 148.80 0.00 5.45 3.50 64 E14a_E16a KnownJunction 0 0.00 0.00 20.76 17.25 15.70 52.75 12.14 66.50 68.55 81.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.77 86.21 18.02 0.00 0.00 0.00 65 E14a_E16b KnownJunction 0 0.00 12.30 3.02 12.49 3.82 13.91 10.16 28.01 48.41 20.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.44 26.82 34.64 0.00 0.00 0.00 66 E14a_E17a KnownJunction 0 0.00 9.41 1.51 3.10 3.48 16.13 10.51 11.25 3.18 5.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.56 40.28 2.49 0.00 0.00 0.00 67 ER15a ExonRegion 0 6.09 122.14 85.14 69.63 63.97 157.04 93.12 341.97 412.42 262.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 327.11 804.16 164.99 0.00 1.70 0.00 68 E15a_E16a KnownJunction 0 6.96 85.31 58.81 58.40 84.55 132.65 46.99 220.03 281.54 174.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 199.47 512.58 111.86 0.00 0.00 0.00 69 E15a_E16b KnownJunction 0 0.00 34.73 23.39 12.62 30.90 33.50 32.02 108.56 106.51 70.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73.04 216.95 58.42 0.00 0.00 0.00 70 ER16a ExonRegion 0 8.47 105.24 92.21 81.09 86.29 182.92 76.13 339.21 427.97 295.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 266.54 641.85 160.64 0.00 0.00 0.00 71 ER16b ExonRegion 0 5.82 178.95 103.15 101.10 168.74 219.54 145.85 411.42 469.99 337.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 430.71 763.37 227.24 0.34 0.15 0.00 72 E16a_E17a KnownJunction 0 10.82 297.64 110.55 102.65 239.13 304.99 186.94 406.35 467.76 347.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 535.08 1395.43 292.23 2.84 0.00 0.00 73 ER17a ExonRegion 0 6.35 263.48 83.99 92.39 196.50 253.79 156.70 362.69 410.91 266.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 396.46 1254.70 248.18 3.86 4.21 0.00 74 E17_Da KnownBoundary 0 6.52 379.60 155.61 190.72 265.87 424.93 224.79 702.82 695.71 426.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 309.70 1419.71 365.86 0.00 8.70 0.00 75 ER17b ExonRegion 0 7.54 297.49 98.07 113.81 179.28 255.83 142.27 471.52 468.27 319.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 256.90 927.00 284.60 1.24 3.75 2.08 76 E17b_E19a KnownJunction 0 3.19 245.88 93.14 124.63 174.19 229.13 125.73 510.88 483.62 359.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 286.19 623.64 199.81 3.15 0.00 3.67 77 ER18a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.12 0.08 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78 ER19a ExonRegion 0 9.66 226.55 96.24 106.66 199.09 245.20 151.35 553.48 525.28 381.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 362.35 716.89 216.90 1.41 2.17 0.51 79 E19_Da KnownBoundary 0 2.96 364.54 105.38 115.54 300.76 317.94 206.02 681.79 566.49 426.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 496.86 1030.34 274.78 3.15 5.63 0.00 80 ER19b ExonRegion 0 20.30 300.45 102.37 134.26 333.23 370.76 205.93 661.91 573.41 406.21 0.00 1.89 0.00 0.00 0.00 0.00 0.00 500.17 1449.42 280.25 1.58 3.05 0.00 81 E19_Db KnownBoundary 0 36.82 325.86 77.20 128.09 422.92 488.75 256.28 481.96 442.79 292.69 0.00 6.30 0.00 0.00 0.00 0.00 0.00 275.50 1625.55 287.82 0.00 5.45 0.00 82 ER19c ExonRegion 0 13.90 366.45 80.86 152.54 314.22 363.01 225.91 585.44 540.14 389.43 0.00 1.14 0.00 0.00 0.00 0.00 0.00 297.43 763.85 203.36 0.00 3.14 1.58 83 E19_Dc KnownBoundary 0 7.33 254.49 41.60 77.31 111.12 185.92 118.00 300.54 259.23 184.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 124.11 308.90 83.54 0.00 0.00 0.00 84 E19_Dd KnownBoundary 0 14.97 162.54 44.00 54.87 197.62 117.89 120.65 213.63 208.94 146.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 111.59 272.76 105.34 0.00 3.12 0.00 85 ER19d ExonRegion 0 16.93 432.47 103.34 152.64 401.36 413.83 287.30 577.30 531.51 387.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 265.46 833.50 228.37 0.00 2.08 0.00 86 ER19e ExonRegion 0 35.79 589.64 234.35 282.51 591.79 446.04 355.29 800.53 633.28 421.67 0.00 0.06 0.00 0.00 0.00 0.00 0.00 243.27 820.43 201.43 0.18 4.20 0.86