Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DGCR14 Gene 0 14.37 19.85 35.70 25.62 16.73 22.75 21.86 27.84 18.84 31.25 34.03 9.48 10.37 30.91 38.52 30.55 26.08 46.28 29.39 26.82 22.44 12.89 15.29 2 434568 Transcript 0 4.65 1.36 1.01 2.60 0.35 1.44 0.92 1.62 0.31 1.37 1.79 0.09 3.47 1.74 1.97 5.33 4.12 4.85 2.18 2.79 4.44 1.13 1.94 3 252137 Transcript 0 3.34 12.18 12.27 12.83 12.51 10.53 9.97 14.36 5.59 15.45 1.32 0.87 1.12 2.93 2.17 2.82 3.01 18.61 9.10 13.51 1.32 2.01 1.79 4 469466 Transcript 0 6.45 2.83 4.88 9.09 0.00 0.00 1.94 0.00 0.00 1.58 2.53 0.00 0.00 0.00 0.00 0.00 3.65 11.15 0.00 11.12 0.00 0.00 4.35 5 472073 Transcript 0 5.89 7.23 3.87 7.97 2.04 8.78 3.66 7.09 2.31 9.01 9.73 2.29 2.94 6.23 3.79 2.46 4.94 13.49 10.59 9.05 5.45 2.42 5.18 6 ER1a ExonRegion 0 6.84 2.35 1.98 0.00 8.54 4.09 6.06 0.00 0.19 1.01 13.23 2.16 0.00 3.12 5.02 15.78 8.76 4.26 6.25 2.05 1.78 0.00 0.45 7 E1_Ac KnownBoundary 1 146.25 127.74 27.73 24.71 83.87 184.33 127.19 24.11 14.03 35.27 104.18 12.90 0.00 122.96 190.87 151.67 57.32 101.48 102.40 37.33 70.67 5.39 51.47 8 ER1b ExonRegion 0 57.80 52.56 11.97 6.24 45.49 77.87 57.13 4.19 7.22 15.04 63.64 7.49 0.00 51.16 83.58 81.73 38.09 26.93 56.23 19.48 34.41 5.05 30.04 9 ER1c ExonRegion 0 34.38 48.23 19.42 16.15 23.43 56.27 43.32 16.47 14.15 23.29 51.58 4.84 2.07 38.61 57.50 51.60 41.77 36.50 52.45 24.76 47.02 9.58 37.81 10 E1_Da KnownBoundary 0 0.00 5.99 1.54 5.16 0.00 5.00 0.00 2.26 5.61 2.66 5.11 0.00 7.30 0.00 0.00 0.00 0.00 4.73 4.71 11.06 0.00 0.00 0.00 11 E1a_E2a KnownJunction 1 9.04 11.97 32.64 24.04 11.80 24.19 2.25 32.24 21.56 50.10 101.71 12.60 0.00 35.91 52.41 11.36 63.39 24.33 29.55 18.22 100.33 5.57 11.27 12 ER1d ExonRegion 0 3.06 4.53 7.14 13.27 7.14 4.92 4.85 6.36 5.30 8.71 6.43 2.05 3.55 7.02 9.40 13.07 6.76 24.08 10.93 16.48 3.21 1.73 6.16 13 E1_Db KnownBoundary 0 6.30 3.09 8.37 11.75 0.00 2.90 1.72 9.45 4.66 8.33 4.21 5.70 19.48 12.66 8.90 21.19 4.77 21.85 8.75 17.00 0.00 2.88 11.18 14 E1b_E2a KnownJunction 0 6.45 2.83 4.88 9.09 0.00 0.00 1.94 0.00 0.00 1.58 2.53 0.00 0.00 0.00 0.00 0.00 3.65 11.15 0.00 11.12 0.00 0.00 4.35 15 ER1e ExonRegion 0 5.84 4.86 4.41 8.28 4.07 4.27 3.34 6.66 3.26 7.00 7.50 4.59 5.88 7.34 7.58 4.92 5.76 13.62 8.84 9.02 2.99 2.39 6.09 16 E1_Dc NovelBoundary 0 10.59 6.45 7.33 3.40 4.24 2.90 6.67 0.00 6.42 4.14 4.84 0.00 6.49 4.89 22.25 3.85 0.00 4.48 4.71 3.20 0.00 2.57 0.00 17 E1c_E2a KnownJunction 0 5.93 9.60 3.34 7.66 0.00 13.29 3.97 7.52 1.36 11.01 11.95 0.00 0.00 5.12 0.00 0.00 4.11 13.35 12.33 9.08 7.91 2.45 4.27 18 ER2a ExonRegion 1 16.74 12.02 66.36 56.39 13.56 20.42 19.21 70.83 33.92 68.05 145.10 14.62 10.21 60.53 72.92 48.21 122.94 71.36 45.37 51.35 114.05 19.17 25.45 19 E2_Da KnownBoundary 0 24.37 5.33 102.72 83.41 22.24 7.67 27.38 108.60 41.23 76.58 121.08 18.61 13.64 94.65 128.56 105.87 139.78 100.40 79.72 76.83 86.67 24.49 43.54 20 ER2b ExonRegion 0 9.56 12.32 81.07 66.04 29.89 38.08 35.65 67.05 42.08 67.38 100.50 22.24 23.41 106.48 121.85 107.16 80.58 127.39 97.26 56.43 60.58 35.77 61.67 21 E2b_E3a KnownJunction 1 17.11 26.57 65.46 39.79 57.22 109.43 103.38 55.49 42.56 62.99 96.71 29.41 19.64 81.64 86.41 41.01 114.07 69.64 47.91 31.70 66.72 20.64 23.56 22 I2 Intron 0 0.00 2.25 0.00 0.00 2.97 13.22 2.94 1.43 4.08 0.95 2.14 0.00 0.00 0.74 3.60 3.30 10.98 1.53 7.06 1.18 1.22 8.08 0.00 23 I2_AR1 ActiveIntronRegion 0 0.00 2.30 0.00 0.00 3.03 13.51 3.00 1.44 4.16 0.97 2.19 0.00 0.00 0.76 3.67 3.37 11.22 1.56 7.18 1.21 1.25 8.22 0.00 24 E3_Aa NovelBoundary 0 15.04 7.96 11.59 1.27 4.33 2.16 4.42 6.20 6.83 6.58 5.26 0.00 0.00 2.47 14.09 4.36 4.30 13.68 13.74 0.00 2.66 2.33 3.84 25 ER3a ExonRegion 0 19.03 47.85 75.62 36.05 26.79 65.52 70.91 37.67 33.59 60.37 88.25 33.60 23.35 89.38 94.62 49.69 77.71 64.63 57.24 58.16 68.54 30.38 32.39 26 E3_Da NovelBoundary 0 10.37 0.00 8.43 4.79 7.47 0.00 2.25 3.78 18.61 2.74 2.16 11.85 0.00 22.25 28.31 27.94 31.60 15.84 12.71 5.94 5.81 4.78 7.60 27 E3a_E4a KnownJunction 0 34.97 52.95 83.41 41.45 18.85 20.10 53.17 29.57 33.94 67.85 83.02 6.30 27.60 65.04 127.20 82.03 56.57 81.25 55.15 37.14 44.97 37.17 26.89 28 I3 Intron 0 8.13 6.35 6.54 6.61 9.23 6.45 12.67 9.81 7.73 7.57 10.95 8.52 4.96 11.69 15.20 16.35 10.21 13.43 10.78 10.73 8.46 7.12 7.07 29 I3_SR1 SilentIntronRegion 0 8.37 7.20 6.10 7.12 10.41 7.54 15.41 10.68 8.38 7.28 11.53 12.87 6.92 11.34 14.83 15.50 10.94 12.84 11.13 11.51 8.69 7.72 6.53 30 I3_AR1 ActiveIntronRegion 0 7.71 4.84 7.36 5.71 7.12 4.49 7.74 8.26 6.56 8.11 9.93 0.65 1.43 12.35 15.91 17.95 8.92 14.55 10.19 9.36 8.08 6.06 8.08 31 E4_Aa NovelBoundary 0 9.71 6.58 5.47 8.56 3.82 4.66 6.23 9.16 13.54 8.76 16.74 0.00 0.00 11.48 11.37 7.69 3.55 12.81 12.89 11.70 11.92 3.12 10.76 32 ER4a ExonRegion 0 48.32 48.58 101.89 50.88 26.13 42.99 51.31 66.07 54.37 81.85 123.60 40.11 34.82 113.06 128.56 103.26 88.19 121.00 92.45 57.87 82.65 43.01 45.59 33 E4a_E5a KnownJunction 0 91.50 50.71 126.25 92.90 47.88 74.56 63.33 97.88 78.82 93.00 198.10 37.36 20.13 138.62 136.10 142.95 118.28 149.36 157.65 94.15 76.91 43.60 63.34 34 E5_Aa NovelBoundary 0 6.37 0.00 2.99 5.46 4.33 9.54 1.63 0.00 4.02 6.50 7.48 0.00 0.00 0.00 0.00 11.79 0.00 3.86 13.55 5.69 2.59 0.00 6.74 35 ER5a ExonRegion 0 48.70 41.24 137.09 77.35 47.12 79.72 70.32 93.13 75.35 96.18 177.38 48.72 38.39 141.16 165.54 140.24 100.59 169.93 103.61 89.15 106.17 60.97 63.78 36 E5a_E6a KnownJunction 0 61.20 49.14 143.19 75.18 53.48 59.80 85.85 100.63 82.23 99.79 163.30 61.82 33.93 158.63 165.89 143.30 70.97 181.44 79.44 94.15 90.07 66.25 65.56 37 ER6a ExonRegion 0 58.91 44.00 134.95 81.84 43.43 68.04 66.45 88.06 82.16 96.53 158.47 48.69 42.67 120.50 156.88 133.95 93.85 177.66 113.91 92.49 95.80 56.24 67.08 38 E6a_E7a KnownJunction 0 5.70 3.16 0.00 1.86 0.00 2.33 0.00 0.00 0.00 1.13 0.00 0.00 8.28 0.00 0.00 7.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E6a_E7b KnownJunction 0 53.64 68.21 148.22 83.97 53.65 58.21 63.95 89.13 74.42 75.37 108.71 49.22 44.15 117.14 108.78 90.32 86.58 137.34 84.61 92.68 96.62 32.21 47.21 40 E7_Aa NovelBoundary 0 6.59 2.96 2.60 0.00 4.33 0.00 0.00 9.94 1.24 0.00 5.37 0.00 0.00 4.77 0.00 8.54 4.77 16.37 0.00 0.00 2.29 0.00 0.00 41 ER7a ExonRegion 0 8.26 0.92 3.02 5.94 1.05 1.98 2.76 2.84 0.92 2.99 5.36 0.27 2.13 5.22 5.91 4.63 7.86 11.97 2.50 2.36 7.27 3.40 5.82 42 E7_Da NovelBoundary 0 79.20 68.67 95.47 52.67 25.47 67.63 53.35 65.84 59.58 73.63 73.39 22.66 6.33 84.41 37.70 72.37 52.92 104.42 54.68 64.24 97.11 59.89 40.55 43 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 4.49 2.57 4.05 6.01 6.05 0.00 0.00 44 ER7b ExonRegion 0 62.59 65.66 127.26 63.18 37.46 67.46 55.42 81.85 69.34 84.30 113.35 38.35 28.48 123.67 95.53 104.87 79.69 142.67 84.87 87.08 121.05 55.96 52.65 45 ER7c ExonRegion 0 74.56 79.63 129.71 85.97 33.33 91.56 78.88 82.32 72.25 101.98 128.27 44.72 35.50 126.20 134.02 131.99 105.63 187.97 76.99 88.93 99.82 53.25 49.12 46 E7_Db NovelBoundary 0 0.00 0.00 1.83 0.00 4.24 0.00 0.00 2.55 0.00 0.00 2.68 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 12.55 47 E7b_E8a KnownJunction 0 68.38 73.54 157.50 113.44 67.23 160.82 120.34 98.54 74.02 86.68 96.39 44.71 27.60 108.60 163.92 182.09 77.33 190.15 81.23 74.46 73.52 50.40 63.17 48 E8_Aa NovelBoundary 0 14.52 0.00 7.01 7.13 4.16 0.00 0.00 7.48 1.13 0.00 7.48 0.00 6.82 4.89 4.45 4.02 9.44 0.00 0.00 8.50 6.24 0.00 15.37 49 ER8a ExonRegion 0 41.43 68.92 125.32 90.97 47.14 96.07 93.30 94.75 70.77 91.38 114.64 35.93 53.51 120.85 127.81 123.34 92.82 180.74 84.41 81.14 83.72 47.58 70.75 50 E8a_E9a KnownJunction 0 37.56 47.43 127.35 72.25 45.33 60.87 95.26 100.55 66.35 84.70 97.08 18.91 54.70 139.62 110.39 183.63 120.06 190.89 83.48 75.10 65.36 70.66 75.46 51 I8_AR1 ActiveIntronRegion 0 0.00 1.81 0.54 0.00 0.00 1.43 1.18 1.73 1.78 2.29 1.29 0.00 4.69 5.59 14.83 5.94 3.30 3.70 2.48 3.78 6.61 0.00 2.94 52 I8_SR2 SilentIntronRegion 0 5.80 2.92 4.27 4.05 7.66 4.31 10.36 4.65 4.60 2.74 5.27 2.33 7.12 8.97 11.74 6.36 6.15 5.34 3.11 5.72 4.52 3.83 3.64 53 I8_AR2 ActiveIntronRegion 0 10.95 2.45 4.99 5.39 10.78 2.03 4.50 6.36 4.42 2.81 5.32 2.81 3.46 7.10 8.28 8.54 2.98 3.88 5.80 4.25 2.38 3.84 2.44 54 ER9a ExonRegion 0 46.25 42.25 150.48 87.54 27.82 52.69 54.67 101.93 75.99 102.06 160.75 37.17 66.87 145.71 185.68 142.02 96.98 171.81 116.46 78.58 90.47 55.39 64.86 55 E9a_E10a KnownJunction 0 74.98 59.73 177.02 91.46 28.18 43.78 49.06 115.83 117.16 105.57 188.63 58.37 34.90 138.97 186.29 151.76 96.77 156.86 162.26 60.66 105.27 67.85 81.52 56 ER10a ExonRegion 0 42.21 35.85 90.33 50.75 24.26 43.41 43.22 55.90 49.22 69.41 101.46 26.07 33.16 86.08 134.72 81.83 78.19 83.82 69.54 49.44 61.47 38.71 37.91 57 E10_Da KnownBoundary 0 64.01 38.22 35.24 43.55 39.98 42.42 59.84 36.68 14.18 33.98 66.12 0.00 0.00 71.99 97.53 72.80 57.97 48.87 73.70 21.03 26.63 8.76 27.32 58 E10_Db KnownBoundary 0 0.00 9.93 13.39 11.49 3.65 15.67 6.40 17.50 5.21 5.37 0.00 0.00 0.00 4.83 8.90 0.00 12.16 38.43 4.61 24.16 0.00 6.12 7.26 59 ER10b ExonRegion 0 21.37 17.58 27.00 24.44 7.42 24.37 24.04 28.10 8.17 22.31 23.44 0.56 0.00 39.45 49.88 30.49 25.13 53.11 25.28 25.39 9.88 7.66 5.12 60 ER10c ExonRegion 0 3.34 12.18 12.27 12.83 12.51 10.53 9.97 14.36 5.59 15.45 1.32 0.87 1.12 2.93 2.17 2.82 3.01 18.61 9.10 13.51 1.32 2.01 1.79