Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	MAPK1	Gene	0	69.06	98.41	47.51	81.63	90.08	107.63	168.47	78.95	109.27	91.72	164.54	109.88	171.37	169.18	77.65	122.83	125.49	122.88	76.47	101.09	117.59	144.20	112.10
2	398822	Transcript	0	34.12	19.29	13.94	15.60	52.93	20.23	71.45	10.36	19.05	10.80	35.52	58.04	85.66	59.06	43.93	37.56	24.04	4.94	3.62	10.76	11.53	28.77	9.49
3	415911	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	215832	Transcript	0	0.02	0.02	0.04	0.02	0.03	0.02	0.00	0.00	0.00	0.02	0.06	0.25	0.53	0.31	0.70	0.06	0.03	0.00	0.06	0.02	0.09	0.00	0.06
5	491588	Transcript	0	15.05	8.00	6.48	16.98	19.15	4.19	33.23	8.77	15.13	11.24	12.41	10.45	25.90	9.10	8.41	11.10	9.15	17.65	9.06	8.88	13.65	27.53	18.54
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.97	0.79	0.00	0.00	0.73	6.84	2.58	0.00	3.72	2.40	0.00	8.19	2.27	0.00	2.62	4.32	1.08	0.00
7	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	1.43	0.00	55.88	20.05	7.19	6.71	12.65	58.91	6.30	5.68	19.78	8.78	21.96	62.37	31.71	11.58	25.25	48.99	5.45	17.76
8	ER1b	ExonRegion	0	3.32	13.48	8.06	7.04	8.47	17.97	18.52	11.62	16.75	17.81	69.55	15.91	51.80	75.91	33.96	48.14	57.07	69.60	18.93	31.95	73.72	33.92	46.33
9	E1a_E2a	KnownJunction	0	6.22	75.58	40.39	44.82	68.51	150.48	131.96	75.17	105.32	122.79	238.48	40.51	130.51	367.30	188.76	207.98	240.11	228.20	119.53	156.92	208.93	233.05	165.95
10	Ix	Intron	0	11.33	7.47	12.13	14.33	14.51	4.69	35.25	14.59	11.76	10.22	1.65	8.06	15.76	1.09	6.93	8.46	8.67	5.54	7.62	12.91	2.71	1.87	10.43
11	Ix_SR4	SilentIntronRegion	0	12.34	7.92	14.15	15.62	17.62	4.75	39.95	14.58	12.33	10.17	1.66	9.20	19.45	0.97	6.76	8.08	8.71	4.31	7.97	13.11	2.51	1.97	9.37
12	Ix_AR2	ActiveIntronRegion	0	19.43	10.24	16.67	25.28	15.65	9.38	48.94	34.47	20.90	13.82	2.21	10.60	21.48	2.08	10.92	18.93	13.59	14.75	18.90	19.18	5.66	3.50	21.97
13	Ix_AR1	ActiveIntronRegion	0	8.75	8.65	11.43	15.22	13.79	3.83	38.99	16.05	16.32	14.92	2.73	8.42	10.38	1.71	9.97	10.59	11.66	13.20	7.21	19.35	2.00	2.94	18.60
14	Ix_SR2	SilentIntronRegion	0	9.01	14.14	13.62	14.01	19.48	4.48	33.10	12.22	12.49	12.06	0.81	1.51	4.91	1.85	12.01	6.29	10.59	4.25	11.41	18.70	6.41	2.62	6.69
15	Ix_AR3	ActiveIntronRegion	0	16.10	12.18	10.16	11.57	17.18	4.02	30.07	17.24	12.19	16.06	2.10	9.80	18.22	1.70	11.02	9.01	8.96	3.27	5.78	14.14	5.04	2.04	16.57
16	Ix_SR4	SilentIntronRegion	0	14.33	7.20	5.00	7.41	10.59	2.86	23.44	9.43	6.63	5.80	1.17	5.65	11.83	1.51	5.04	5.96	5.74	5.40	3.71	9.30	2.79	2.23	7.43
17	Ix_AR1	ActiveIntronRegion	0	20.27	8.13	14.61	14.67	17.47	3.52	22.52	16.68	8.58	13.50	1.35	8.59	13.10	0.30	8.03	9.92	6.56	6.23	3.33	8.97	2.25	2.76	5.32
18	Ix_SR1	SilentIntronRegion	0	14.96	6.24	7.05	8.87	10.10	2.87	18.81	12.84	8.27	8.64	1.18	7.84	10.17	1.37	5.24	7.25	5.87	7.12	4.59	6.72	3.64	2.38	7.93
19	ER2a	ExonRegion	0	40.01	75.36	93.75	106.74	76.81	150.92	185.79	151.96	232.14	205.46	560.99	198.71	483.84	532.35	204.12	385.40	421.14	314.66	162.80	276.04	348.86	392.35	273.91
20	E2a_E3a	KnownJunction	0	59.94	136.29	115.02	140.97	97.62	138.10	248.72	203.89	323.78	282.88	831.11	381.57	691.35	645.01	323.75	354.86	564.38	354.22	202.26	298.88	376.59	468.01	279.73
21	ER3a	ExonRegion	0	69.15	135.12	102.39	140.28	149.18	163.43	301.94	188.47	293.89	246.80	692.77	488.87	927.42	671.90	283.04	498.41	465.72	387.81	218.75	339.16	434.91	473.20	353.06
22	E3a_E4a	KnownJunction	0	37.41	120.57	86.66	154.66	88.71	225.89	295.85	159.94	285.47	213.02	478.23	637.41	1120.54	553.71	257.87	322.22	344.18	355.84	205.46	344.19	433.37	357.24	304.58
23	ER4a	ExonRegion	0	63.78	148.71	85.84	127.02	132.14	230.09	294.61	155.25	265.49	197.80	540.50	550.95	954.96	664.83	249.63	467.06	394.87	417.94	199.70	310.40	473.35	408.21	370.42
24	E4_Da	NovelBoundary	0	3.11	16.90	22.77	21.81	32.34	2.90	70.57	27.40	13.98	8.54	0.00	0.00	13.64	4.94	20.03	4.36	8.04	34.95	16.57	23.65	14.15	3.12	19.97
25	E4a_E5a	KnownJunction	0	94.02	237.59	102.13	154.23	179.71	255.36	420.21	217.12	323.55	243.96	582.83	574.54	944.42	788.98	301.63	724.94	424.40	426.14	233.51	378.96	476.24	777.60	507.06
26	Ix	Intron	0	15.38	14.92	9.92	18.62	11.13	4.63	45.70	14.28	10.21	12.50	2.85	8.32	20.15	1.77	8.10	13.63	8.34	10.92	8.05	20.22	6.55	5.22	12.74
27	Ix_SR3	SilentIntronRegion	0	17.15	18.14	11.55	23.75	12.60	6.08	51.54	16.08	11.79	15.06	3.38	8.87	19.08	1.80	8.39	14.51	9.49	12.04	8.79	22.71	8.07	5.62	13.72
28	Ix_SR2	SilentIntronRegion	0	22.78	9.88	19.72	34.33	8.92	9.17	79.00	24.77	16.70	30.91	7.82	15.05	51.37	2.86	8.70	32.83	12.10	31.59	14.11	28.17	23.51	13.79	35.24
29	Ix_AR2	ActiveIntronRegion	0	22.29	14.17	16.05	21.01	13.73	3.62	61.04	24.46	16.56	16.49	3.69	8.82	37.00	2.30	12.82	19.36	13.39	18.38	10.28	29.98	7.72	8.35	21.43
30	E5_Aa	NovelBoundary	0	10.30	15.46	19.28	33.30	20.12	8.29	42.22	16.18	24.45	9.51	5.16	5.55	31.49	2.47	30.16	7.86	7.67	18.49	13.93	13.87	13.65	10.65	27.91
31	ER5a	ExonRegion	0	78.24	215.26	87.74	134.18	188.74	240.02	380.67	175.18	278.06	214.54	630.28	549.62	900.08	694.50	237.45	558.09	437.87	394.07	241.89	336.02	406.34	476.26	386.72
32	E5a_E6a	KnownJunction	0	138.84	211.34	83.00	130.82	142.36	183.59	414.91	167.99	271.81	225.43	621.00	529.52	760.18	695.98	282.96	570.79	505.28	336.48	289.42	276.38	402.05	579.45	514.48
33	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	Ix	Intron	0	16.28	9.86	3.66	9.17	6.71	4.29	26.79	9.48	8.01	3.43	2.26	2.98	10.89	0.91	4.94	6.97	12.14	4.46	4.26	8.54	2.95	2.09	5.89
35	Ix_SR1	SilentIntronRegion	0	16.39	9.92	3.69	9.23	6.76	4.32	26.96	9.54	8.06	3.46	2.28	3.00	10.96	0.92	4.97	7.01	12.22	4.49	4.29	8.59	2.97	2.10	5.92
36	ER6a	ExonRegion	0	104.83	202.53	92.54	155.51	187.04	230.09	412.84	201.46	308.03	253.48	707.09	480.70	710.93	742.87	278.15	561.33	499.64	309.23	247.59	310.65	392.28	553.82	416.69
37	E6_Da	NovelBoundary	0	14.82	2.63	10.14	20.18	4.33	5.79	26.45	29.66	9.84	19.18	2.53	5.85	20.78	0.00	9.64	11.96	19.07	2.16	0.00	28.63	0.00	3.00	14.51
38	E6a_E7a	KnownJunction	0	96.54	174.31	82.08	138.48	144.48	135.94	248.15	159.04	242.65	204.20	510.02	352.61	676.09	584.62	247.11	403.74	375.03	224.22	171.86	253.82	328.47	358.22	207.86
39	E7_Aa	NovelBoundary	0	10.52	15.13	8.46	23.44	67.57	0.00	35.15	23.17	15.51	10.74	2.68	18.91	19.32	2.47	8.90	30.85	8.79	32.38	21.74	17.51	19.77	0.00	23.30
40	ER7a	ExonRegion	0	119.01	246.58	99.31	162.91	196.67	262.48	358.90	166.20	261.13	233.55	593.28	410.55	596.66	675.09	263.38	478.13	490.39	347.33	200.62	283.67	492.37	456.59	368.87
41	E7_Da	NovelBoundary	0	17.11	14.60	30.54	41.62	3.90	7.55	22.57	21.89	26.94	4.32	24.48	6.00	26.62	9.77	25.47	7.95	13.00	18.03	40.28	29.47	17.05	22.35	16.82
42	E7a_E8b	KnownJunction	0	98.02	234.70	84.89	138.74	147.37	146.62	331.88	168.57	197.19	198.13	396.63	476.26	311.02	553.18	277.40	381.69	407.20	380.54	171.58	335.37	378.63	346.15	327.11
43	Ix	Intron	0	16.17	12.30	11.14	24.22	13.11	8.21	31.09	12.19	14.01	10.38	7.95	7.36	17.55	7.99	10.28	12.40	9.24	17.82	10.34	16.86	18.81	20.59	22.77
44	Ix_SR3	SilentIntronRegion	0	18.45	11.75	12.58	25.51	12.10	8.89	31.70	13.20	14.86	11.44	8.69	7.12	14.68	8.36	12.25	13.99	10.49	22.13	11.89	20.13	24.89	21.10	23.23
45	Ix_AR1	ActiveIntronRegion	0	17.35	19.63	11.64	32.92	23.39	8.35	39.55	10.33	17.76	9.96	6.69	9.23	38.83	9.73	7.40	11.37	10.22	11.39	7.54	13.18	4.82	28.08	28.36
46	E8_Aa	NovelBoundary	0	35.41	21.97	4.44	18.71	39.64	39.41	70.35	19.02	17.56	14.16	9.69	0.00	13.64	4.94	4.45	0.00	4.49	8.42	23.91	5.75	15.32	25.60	24.16
47	ER8a	ExonRegion	0	15.05	8.00	6.48	16.98	19.15	4.19	33.23	8.77	15.13	11.24	12.41	10.45	25.90	9.10	8.41	11.10	9.15	17.65	9.06	8.88	13.65	27.53	18.54
48	E8_Ab	KnownBoundary	0	6.74	5.26	13.39	34.56	24.28	2.84	27.95	10.97	23.18	17.46	0.00	0.00	38.80	4.83	4.45	6.75	18.14	15.55	0.00	9.08	22.61	36.80	16.56
49	ER8b	ExonRegion	0	101.73	263.42	102.57	177.69	228.85	241.80	428.80	167.27	276.89	220.19	572.94	384.60	438.95	633.39	225.67	437.78	476.28	447.11	244.64	293.31	492.54	412.79	353.24
50	E8_Da	KnownBoundary	0	52.60	27.76	18.27	12.05	46.60	8.69	66.16	10.31	30.73	10.85	62.86	38.41	106.49	84.17	85.67	71.61	51.80	2.57	7.53	8.82	16.49	40.60	10.76
51	E8a_E9a	KnownJunction	0	98.17	272.65	80.22	200.64	224.28	254.06	484.42	183.48	262.12	229.83	412.79	268.44	448.02	495.44	110.14	327.95	453.30	434.39	249.04	280.72	461.60	467.89	340.34
52	ER8c	ExonRegion	0	34.12	19.29	13.94	15.60	52.93	20.23	71.45	10.36	19.05	10.80	35.52	58.04	85.66	59.06	43.93	37.56	24.04	4.94	3.62	10.76	11.53	28.77	9.49
53	E8_Db	NovelBoundary	0	32.97	9.60	23.89	30.47	47.11	10.39	40.06	14.91	13.92	13.51	8.00	68.72	129.21	19.48	0.00	52.29	8.32	11.69	16.75	8.31	0.00	18.55	3.67
54	Ix	Intron	0	22.59	12.58	14.28	12.37	18.85	9.18	27.85	15.80	19.62	9.06	20.76	23.48	29.35	28.87	12.38	34.11	17.68	27.69	11.43	17.65	21.54	16.35	21.60
55	Ix_SR3	SilentIntronRegion	0	32.54	11.31	12.13	14.14	24.93	7.83	35.75	14.98	17.91	5.32	13.94	35.56	46.64	25.54	12.04	29.40	17.57	15.06	10.91	15.03	14.27	13.10	17.50
56	Ix_SR2	SilentIntronRegion	0	21.86	10.09	14.81	10.95	15.03	7.34	23.24	14.21	18.59	8.57	19.96	16.88	23.44	27.87	13.55	30.99	16.63	28.69	10.43	17.15	20.92	13.49	19.90
57	Ix_AR2	ActiveIntronRegion	0	16.24	22.22	11.00	11.61	16.93	10.51	29.49	13.82	16.43	8.22	15.14	22.03	28.34	25.52	6.17	36.02	14.22	25.42	11.58	20.15	20.33	25.59	26.52
58	Ix_SR1	SilentIntronRegion	0	11.72	20.34	9.90	10.90	17.91	16.22	39.31	14.49	20.43	9.09	30.18	27.64	40.77	27.98	24.55	67.22	9.90	29.28	22.05	17.35	44.07	33.50	29.82
59	Ix_AR1	ActiveIntronRegion	0	19.57	16.07	16.37	15.29	25.21	14.69	33.14	21.90	25.50	14.03	31.28	32.10	31.32	36.30	12.22	45.45	22.56	36.89	14.46	20.32	29.72	22.54	27.53
60	E9_Aa	NovelBoundary	0	48.45	37.56	27.08	25.47	34.89	16.87	56.53	15.36	42.39	13.67	40.27	25.21	25.49	39.50	14.09	37.94	8.60	46.72	21.74	33.36	48.12	31.90	22.62
61	ER9a	ExonRegion	0	66.85	211.57	86.59	150.36	135.71	199.63	299.78	147.83	275.11	237.90	381.70	252.14	284.39	453.09	144.08	336.37	367.32	441.86	224.92	279.93	443.55	365.45	327.96
62	E9_Da	KnownBoundary	0	93.42	214.90	114.60	202.80	161.29	271.83	448.60	204.34	292.82	283.90	348.40	209.32	199.34	555.54	199.89	455.61	285.09	548.22	235.77	371.42	455.36	443.39	474.62
63	ER9b	ExonRegion	0	157.39	204.45	96.64	171.73	189.22	221.14	345.55	157.88	206.35	173.58	263.01	173.51	263.58	261.58	133.99	189.14	199.62	206.80	137.16	176.24	179.43	250.43	190.38
64	E9_Db	KnownBoundary	0	0.00	3.22	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	ER9c	ExonRegion	0	0.02	0.02	0.04	0.02	0.03	0.02	0.00	0.00	0.00	0.02	0.06	0.25	0.53	0.31	0.70	0.06	0.03	0.00	0.06	0.02	0.09	0.00	0.06