Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNRPD3 Gene 0 177.36 183.06 154.30 152.20 245.16 179.42 257.30 114.95 96.74 155.19 267.42 150.84 87.74 272.78 334.93 174.28 271.74 164.79 162.21 138.11 119.52 105.53 94.86 2 215829 Transcript 0 156.18 181.24 84.92 132.30 169.94 109.83 184.25 79.61 73.41 95.50 75.42 104.54 75.09 107.98 122.53 72.39 97.46 95.98 92.58 83.09 43.64 48.94 53.43 3 457691 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 468770 Transcript 0 1.51 4.71 5.21 8.74 6.20 5.23 12.36 12.84 5.93 9.24 1.72 5.09 0.69 1.82 4.99 4.50 3.61 4.76 3.39 13.35 2.02 0.37 6.77 5 402849 Transcript 0 1.29 2.57 8.41 13.73 1.13 3.48 6.03 8.65 5.02 9.53 3.21 0.04 0.08 2.59 0.05 0.63 0.00 5.22 2.01 4.04 1.39 1.96 0.62 6 404603 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 3.28 0.00 0.00 0.00 0.00 0.00 3.59 0.00 0.00 0.00 2.62 0.00 0.00 0.00 7 458544 Transcript 0 0.16 0.50 0.13 0.59 2.23 1.57 1.54 0.38 0.51 2.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.51 0.47 1.08 0.00 0.00 0.00 8 439775 Transcript 0 1.69 2.22 4.99 7.40 0.85 2.89 1.65 2.26 10.92 9.80 1.80 0.00 0.00 1.69 2.23 0.98 1.12 7.99 6.69 7.54 1.33 1.01 0.00 9 448916 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ER1a ExonRegion 0 1.46 0.70 1.33 1.80 0.00 1.90 1.57 0.89 0.53 2.14 19.54 1.23 0.00 4.55 4.23 7.69 6.67 9.16 4.33 2.93 5.32 1.17 4.05 11 E1_Ab KnownBoundary 0 6.89 2.70 14.78 4.10 0.00 4.54 8.88 5.38 6.68 10.40 83.23 23.56 18.67 41.09 47.22 65.28 39.74 31.30 13.74 11.89 5.68 56.52 30.39 12 ER1b ExonRegion 0 1.16 3.34 5.22 3.58 1.07 2.41 3.69 0.91 1.17 1.88 10.57 0.59 1.92 7.50 9.78 8.82 10.44 8.99 3.32 5.19 3.40 1.14 1.97 13 E1_Ac KnownBoundary 0 35.34 29.01 16.32 16.98 7.98 30.55 30.74 7.06 6.83 16.68 52.86 0.00 0.00 39.91 88.51 50.07 75.74 29.18 13.84 27.68 9.27 6.12 0.00 14 ER1c ExonRegion 1 303.22 139.11 97.38 79.80 329.50 501.23 530.61 58.10 41.97 81.52 335.26 4.59 11.20 479.45 508.13 286.90 430.73 180.17 199.05 141.86 201.84 104.47 143.54 15 E1_Ad KnownBoundary 1 335.39 170.43 8.57 14.58 362.39 590.34 733.28 9.49 0.00 13.86 328.29 0.00 12.66 443.58 191.48 267.88 456.75 55.17 233.61 116.27 213.94 124.24 147.25 16 E1_Ae KnownBoundary 1 393.77 141.62 15.85 10.19 306.71 416.46 345.04 7.60 1.79 14.85 281.33 0.00 0.00 65.45 140.80 245.58 317.06 41.45 105.98 147.33 189.84 58.78 142.21 17 E1_Af KnownBoundary 1 241.08 51.96 33.29 18.15 266.38 235.55 282.42 17.50 17.01 9.19 136.19 0.00 0.00 20.95 30.04 130.82 175.69 44.36 94.78 70.31 54.98 36.92 64.36 18 E1_Ag KnownBoundary 1 1057.97 349.28 320.80 229.97 1134.81 999.82 1258.46 174.20 108.01 259.70 818.94 6.30 0.00 293.66 380.99 683.84 806.08 656.21 518.98 434.96 413.35 211.75 295.95 19 ER1d ExonRegion 1 858.25 321.31 213.83 160.82 893.70 1228.65 1243.20 137.41 93.25 180.64 793.45 12.99 14.07 985.84 1070.56 729.66 990.27 437.92 460.29 368.08 507.95 232.31 353.87 20 ER1e ExonRegion 1 1380.82 488.77 383.66 255.81 1472.33 1756.14 1838.19 210.78 140.06 305.71 1261.22 16.45 8.91 1512.54 1608.02 1091.51 1425.99 747.51 705.08 600.32 739.56 321.28 495.12 21 ER1f ExonRegion 1 1727.78 635.15 491.78 336.18 1667.88 1837.47 1919.74 269.64 197.21 392.62 1465.78 30.31 14.07 1727.52 1841.33 1194.79 1508.51 923.87 815.45 710.64 792.60 346.56 579.50 22 ER1g ExonRegion 1 1605.41 625.30 569.29 399.29 1383.22 1439.44 1639.61 342.10 256.84 486.02 1469.70 113.01 69.63 1296.09 1575.53 1218.04 1462.55 1185.07 902.60 686.03 694.90 348.54 642.22 23 E1a_E2a KnownJunction 0 1334.16 496.69 687.56 500.44 765.79 809.14 1098.94 415.92 325.84 576.40 1119.65 310.30 206.48 512.86 1104.64 1040.92 1156.80 1332.44 836.73 558.64 466.98 299.92 630.83 24 E2_Ab NovelBoundary 0 204.26 48.74 228.26 194.71 66.98 79.78 105.95 173.91 140.31 221.15 197.84 132.64 72.24 53.39 87.64 300.69 207.29 483.76 207.44 101.18 101.99 41.21 155.45 25 ER2a ExonRegion 0 873.59 338.25 553.77 398.19 520.88 552.43 716.92 337.19 262.77 489.73 918.61 318.94 184.08 413.07 685.18 817.58 908.57 1139.29 646.63 395.74 360.67 218.94 472.80 26 ER2b ExonRegion 1 455.90 119.64 472.51 304.97 106.89 76.53 119.04 302.44 231.25 460.36 1275.98 325.66 155.23 857.90 997.59 511.09 1307.90 441.36 452.83 456.77 606.00 224.37 227.55 27 E2_Da KnownBoundary 0 0.00 0.00 13.93 8.59 0.00 0.00 6.18 6.74 4.51 13.08 0.00 0.00 0.00 4.94 0.00 7.69 3.55 10.03 12.52 20.07 2.35 0.00 8.11 28 E2a_E3a KnownJunction 0 990.92 350.79 802.31 561.50 119.95 48.61 183.32 460.60 365.79 713.88 1573.61 519.62 310.69 2034.91 2534.40 1198.66 1476.30 666.65 891.23 767.65 606.78 473.15 508.17 29 E2a_E4a NovelJunction 1 3.04 3.22 22.53 14.45 0.00 0.00 8.30 16.72 17.48 26.03 11.63 45.16 0.00 28.19 92.96 43.58 22.25 24.00 38.87 12.21 5.07 11.45 8.45 30 ER2c ExonRegion 0 1.51 4.71 5.21 8.74 6.20 5.23 12.36 12.84 5.93 9.24 1.72 5.09 0.69 1.82 4.99 4.50 3.61 4.76 3.39 13.35 2.02 0.37 6.77 31 ER3a ExonRegion 0 430.04 437.11 670.66 492.10 230.16 169.66 357.40 421.77 322.55 590.32 1028.30 394.14 187.25 1513.41 2186.58 1058.13 918.38 849.86 838.81 576.83 405.24 455.48 523.48 32 E3_Da KnownBoundary 0 194.78 646.73 736.28 501.47 513.33 404.77 852.38 458.10 322.05 567.22 838.63 336.86 141.22 910.12 1606.53 868.40 644.23 1187.81 614.23 425.37 319.45 394.65 496.56 33 E3a_E4b KnownJunction 0 0.00 3.09 1.80 9.29 0.00 0.00 4.50 4.35 11.34 6.42 0.00 0.00 0.00 2.12 0.00 0.00 0.00 11.15 4.14 9.65 0.00 0.00 0.00 34 ER3b ExonRegion 0 91.62 424.43 579.78 387.78 1824.84 1136.77 1500.58 348.91 277.62 490.29 1102.89 741.34 394.40 984.25 1337.41 643.95 928.45 577.51 478.84 398.19 467.87 371.54 319.02 35 E3b_E4a KnownJunction 1 379.25 745.66 769.93 582.88 264.18 463.37 689.64 493.26 406.01 586.96 859.85 1303.02 335.21 1653.08 2289.89 897.63 837.03 465.07 786.38 425.05 401.37 451.17 412.56 36 E3b_E4b KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 1.99 2.26 1.71 1.40 0.00 0.00 0.00 2.47 0.00 0.00 0.00 2.07 0.00 3.26 0.00 3.12 0.00 37 E3b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 4.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER4a ExonRegion 0 343.34 671.90 594.40 505.58 186.02 184.74 308.04 443.56 368.26 645.26 1168.35 653.36 252.35 1414.76 1704.47 623.14 1198.18 335.07 629.46 450.59 364.07 711.78 306.67 39 E4_Da KnownBoundary 1 350.51 898.66 452.32 389.49 269.86 132.25 306.27 326.74 264.03 534.15 1273.74 546.03 353.71 830.01 917.74 345.38 1216.45 201.01 336.57 349.37 322.05 778.40 205.81 40 E4_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E4b_E4b NovelJunction 1 269.97 824.85 442.80 507.49 286.25 147.93 473.16 381.62 304.60 481.12 837.16 678.97 361.83 573.43 700.79 196.02 690.04 200.88 320.48 305.52 239.26 391.65 107.30 42 E4_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E4b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 3.28 0.00 0.00 0.00 0.00 0.00 3.59 0.00 0.00 0.00 2.62 0.00 0.00 0.00 44 ER4b ExonRegion 1 252.46 783.82 472.60 451.06 256.66 137.53 368.33 381.44 314.95 535.60 1165.54 623.10 365.63 684.92 735.87 289.01 929.53 232.37 342.75 319.91 298.82 586.05 165.04 45 ER4c ExonRegion 0 215.88 742.26 420.30 453.84 246.17 128.37 389.24 345.69 285.31 471.38 864.01 593.14 304.85 568.44 649.88 228.85 666.78 227.27 302.61 282.98 235.80 445.87 108.66 46 ER4d ExonRegion 0 378.51 631.21 435.26 488.64 431.73 244.45 532.26 378.09 322.57 470.87 614.57 596.56 360.91 599.83 719.11 274.20 513.71 269.13 321.13 258.04 171.94 397.42 128.87 47 E4_Dc KnownBoundary 1 1036.04 750.72 462.96 544.35 919.53 447.41 891.38 427.21 322.48 478.04 485.70 837.57 782.90 762.79 945.80 402.54 536.32 302.98 404.15 253.37 119.35 376.46 171.41 48 E4c_E5a KnownJunction 0 0.00 0.00 9.70 9.52 0.00 0.00 4.37 4.31 1.50 3.30 2.37 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 0.00 49 E4c_E6a KnownJunction 0 6.74 5.79 18.15 18.35 3.40 10.96 1.68 3.86 32.32 30.97 7.21 0.00 0.00 4.65 8.90 3.93 4.49 20.23 22.49 20.07 5.31 3.12 0.00 50 ER4e ExonRegion 1 310.90 361.79 168.51 262.80 339.88 217.76 366.93 158.33 146.29 188.86 131.30 207.85 150.19 211.40 240.82 137.08 188.26 182.79 180.83 163.25 81.97 96.72 102.82 51 E4_Dd NovelBoundary 1 137.65 237.85 215.07 258.28 225.55 227.09 357.98 164.95 160.15 176.99 94.87 78.33 132.30 131.26 156.38 126.63 208.79 268.33 236.90 182.48 127.76 103.79 136.32 52 I4 Intron 0 121.40 374.73 170.79 298.83 223.65 149.81 308.55 198.47 166.94 219.07 77.25 153.57 116.58 107.84 117.99 65.15 98.14 114.54 113.88 162.57 43.04 82.40 55.03 53 I4_SR1 SilentIntronRegion 0 90.36 157.31 132.37 164.65 164.06 173.38 269.30 119.55 126.56 161.58 81.96 82.89 91.46 121.67 155.20 84.29 123.89 149.28 140.51 141.42 100.32 66.86 78.25 54 I4_AR1 ActiveIntronRegion 0 188.58 616.53 267.17 478.52 351.43 220.76 474.29 317.71 262.09 344.41 116.34 249.96 183.43 160.63 169.89 92.76 142.47 164.30 162.68 246.93 51.34 128.94 76.38 55 ER5a ExonRegion 0 2.59 5.14 7.13 17.94 2.26 6.96 7.68 12.98 8.53 15.75 4.04 0.07 0.16 2.70 0.10 1.25 0.00 10.45 4.03 8.07 2.79 1.60 1.24 56 E5_Da NovelBoundary 0 28.67 18.22 26.58 95.46 20.54 2.90 14.88 20.37 15.65 39.92 4.90 12.60 0.00 4.59 4.82 8.54 9.26 18.86 55.81 18.34 3.15 12.31 16.56 57 I5_SR1 SilentIntronRegion 0 6.51 7.88 10.35 30.45 5.32 6.48 12.11 7.05 11.82 21.87 2.28 0.64 0.70 2.45 3.59 2.68 2.39 13.36 6.97 14.85 2.83 1.74 2.26 58 E6_Aa NovelBoundary 0 6.52 16.38 21.52 56.00 15.96 8.23 24.42 18.20 36.54 29.52 2.37 0.00 0.00 0.00 0.00 7.26 4.49 20.23 0.00 17.77 2.84 0.00 12.04 59 ER6a ExonRegion 0 8.08 9.34 31.59 37.09 16.35 15.46 19.18 22.14 32.30 54.27 6.45 0.07 0.04 6.70 4.25 3.39 2.31 31.12 30.47 33.81 3.44 3.89 2.43 60 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 Ix_AR2 ActiveIntronRegion 0 9.77 11.67 5.15 16.13 12.68 6.48 20.62 18.49 3.45 12.02 1.35 0.47 0.00 0.00 2.42 0.00 1.94 15.34 5.98 28.97 1.54 0.43 4.67 62 ER7a ExonRegion 0 1.54 4.50 5.83 5.70 3.36 0.00 1.63 1.09 11.98 15.60 1.38 0.00 0.00 4.11 0.00 2.17 0.00 8.02 9.01 11.03 2.46 0.92 0.00 63 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER8a ExonRegion 0 0.00 0.00 0.02 1.97 0.00 0.58 0.42 0.82 0.00 1.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 0.12 0.42 0.00 0.92 0.00 66 ER9a ExonRegion 0 0.00 0.89 0.00 2.30 6.35 1.03 2.65 0.00 2.47 12.26 0.00 0.00 0.00 0.41 0.00 0.00 0.00 2.43 0.00 9.71 0.00 0.00 0.00 67 ER9b ExonRegion 0 0.00 1.15 0.00 1.16 8.13 1.45 0.85 0.00 1.51 10.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.06 0.00 3.53 0.00 0.00 0.00 68 E9b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69 ER10a ExonRegion 0 0.62 0.84 0.54 1.19 0.78 4.84 1.16 1.51 0.54 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.77 0.00 0.00 0.00