Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SMARCB1 Gene 0 121.56 184.86 366.84 262.84 133.83 183.65 194.67 260.80 173.02 305.59 378.27 156.97 124.70 282.21 372.86 393.21 352.71 414.90 311.07 301.39 224.83 139.89 173.07 2 417137 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 344921 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 263121 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 407422 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 407082 Transcript 0 0.00 0.00 0.00 3.16 0.00 2.10 3.71 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.21 4.61 6.01 0.00 6.25 0.00 7 491967 Transcript 0 22.93 22.54 37.21 35.83 22.01 49.16 35.40 53.34 47.29 47.99 15.92 20.50 21.43 12.98 16.64 34.77 39.40 74.73 37.15 62.96 24.25 12.40 35.19 8 477836 Transcript 0 10.16 10.60 20.08 16.76 6.39 11.61 16.50 21.51 14.93 18.00 4.31 6.20 2.24 3.78 9.02 20.46 20.24 34.26 10.87 30.79 10.48 4.45 17.06 9 ER1a ExonRegion 0 2.82 0.51 0.00 0.00 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.00 0.00 0.55 0.00 0.00 10 ER1b ExonRegion 0 10.90 6.41 0.00 0.00 2.27 4.03 11.85 0.00 0.00 0.29 5.22 0.00 0.00 2.03 7.25 3.12 4.95 0.09 0.00 0.00 7.16 1.98 0.00 11 E1_Ad KnownBoundary 0 59.71 61.77 12.65 1.27 11.29 85.97 101.97 7.89 2.52 10.34 70.18 0.00 5.84 15.25 57.85 23.50 43.95 8.21 11.86 2.49 33.42 11.45 0.00 12 ER1c ExonRegion 0 20.04 20.22 1.80 0.00 5.35 33.76 38.32 0.00 1.02 1.28 36.73 1.78 1.10 7.55 73.73 9.44 14.76 1.85 2.44 0.00 14.39 8.46 0.35 13 ER1d ExonRegion 0 50.79 89.14 148.83 80.14 45.29 89.88 73.46 118.98 71.74 128.62 183.69 36.26 29.39 162.90 207.19 188.71 177.17 197.20 185.02 158.07 123.52 74.69 100.02 14 E1a_E2a KnownJunction 0 50.23 234.56 432.95 267.43 138.54 139.07 97.03 339.31 268.08 396.46 377.89 163.70 98.53 211.14 351.69 433.22 516.03 622.80 310.41 424.73 242.66 133.18 208.71 15 ER2a ExonRegion 0 100.21 258.08 582.85 411.48 210.69 318.08 287.37 452.16 285.54 545.90 580.32 245.16 184.08 376.00 528.57 565.82 558.97 659.22 531.36 508.22 335.85 245.37 267.00 16 E2_Da NovelBoundary 0 127.80 380.72 698.67 525.31 338.71 495.68 480.40 506.40 383.85 616.64 566.35 252.68 165.25 359.53 596.08 461.16 542.96 529.07 624.77 697.78 276.02 214.87 216.05 17 E2a_E3a KnownJunction 0 70.16 61.90 235.18 133.98 77.50 87.68 146.36 147.54 98.93 168.53 427.69 150.50 80.03 253.75 365.29 361.79 441.98 182.35 317.94 243.91 266.26 212.54 190.96 18 E2b_E3a KnownJunction 0 120.61 379.74 747.31 550.48 186.16 372.00 442.38 559.92 398.12 634.99 502.13 171.81 294.62 351.88 769.02 494.91 585.41 588.64 824.68 774.74 302.83 332.50 218.53 19 ER2b ExonRegion 0 110.14 343.22 673.32 488.11 225.85 422.72 412.39 514.50 372.27 603.31 567.13 224.17 227.38 373.37 603.89 515.39 588.17 573.08 705.50 709.45 308.03 294.01 227.10 20 ER3a ExonRegion 0 168.29 346.47 778.05 539.20 211.26 317.03 454.43 618.34 419.48 715.51 856.99 368.21 356.12 607.84 793.86 739.16 825.38 734.16 926.94 766.99 508.54 354.54 328.29 21 E3_Ab KnownBoundary 0 203.22 355.66 746.22 539.63 230.82 257.12 406.34 687.21 404.22 723.45 799.68 346.91 268.98 567.02 686.82 652.82 675.92 789.11 796.26 676.37 449.18 279.90 272.74 22 ER3b ExonRegion 0 178.23 306.46 790.39 582.19 196.16 246.45 311.91 656.18 404.37 778.93 901.51 372.93 320.38 559.05 687.50 843.91 799.08 974.76 878.65 754.12 485.42 345.84 351.01 23 E3a_E4a KnownJunction 0 118.39 286.86 820.02 538.03 162.05 216.92 285.34 652.95 394.87 679.34 571.62 391.03 317.02 443.17 571.48 492.43 532.30 506.31 378.93 643.39 430.16 154.12 198.13 24 E3a_E5a KnownJunction 0 0.00 0.00 0.00 3.16 0.00 2.10 3.71 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.21 4.61 6.01 0.00 6.25 0.00 25 ER4a ExonRegion 0 173.60 337.09 616.86 466.55 247.33 294.58 336.96 501.74 318.44 571.67 626.43 341.65 211.49 560.52 719.62 718.85 673.31 642.49 603.70 628.27 411.34 291.38 299.79 26 E4_Da KnownBoundary 0 31.64 43.35 46.86 63.59 65.03 53.44 39.79 84.53 57.55 78.30 42.75 49.67 38.80 41.09 53.53 72.80 48.81 85.77 79.53 81.75 26.32 44.21 90.83 27 E4a_E5a KnownJunction 0 290.57 449.99 642.85 350.31 331.83 433.16 566.43 456.09 236.86 528.00 708.02 254.48 277.42 587.85 704.99 903.69 731.18 791.93 746.75 558.83 469.63 332.13 320.20 28 ER4b ExonRegion 0 31.04 36.42 56.25 71.07 55.05 53.66 50.68 88.89 78.86 74.25 31.79 43.86 43.95 43.46 58.88 76.39 78.98 113.12 41.76 82.70 37.75 23.07 67.71 29 E4_Db KnownBoundary 0 83.57 46.50 58.99 52.87 47.88 80.92 97.20 82.64 73.81 49.69 16.85 18.91 32.95 24.07 25.84 68.02 81.35 132.82 24.00 89.61 34.29 22.17 69.49 30 E4b_E5a KnownJunction 0 0.00 18.29 6.33 24.81 10.53 13.34 11.48 11.71 14.35 23.37 23.95 24.46 0.00 17.31 29.67 18.63 4.68 25.70 8.38 11.57 22.80 0.00 3.33 31 ER4c ExonRegion 0 22.93 22.54 37.21 35.83 22.01 49.16 35.40 53.34 47.29 47.99 15.92 20.50 21.43 12.98 16.64 34.77 39.40 74.73 37.15 62.96 24.25 12.40 35.19 32 E4_Dc NovelBoundary 0 58.60 32.23 50.68 59.30 16.81 41.45 57.81 56.23 70.54 50.85 26.74 12.90 32.95 14.36 9.64 38.11 15.80 50.24 46.02 73.19 14.64 19.35 36.02 33 I4 Intron 0 17.47 23.22 30.59 38.65 20.21 39.62 29.69 34.24 32.12 32.43 12.34 11.66 15.23 14.69 16.00 21.41 24.74 39.58 20.52 41.49 19.21 9.52 30.61 34 I4_AR2 ActiveIntronRegion 0 20.32 24.33 34.97 42.60 24.33 44.03 34.17 38.87 37.10 37.36 15.24 12.28 19.19 16.74 17.56 25.70 26.74 44.99 24.07 49.32 21.63 10.10 36.07 35 I4_AR3 ActiveIntronRegion 0 19.23 23.39 25.71 47.11 16.87 41.06 21.85 29.27 24.57 26.33 5.67 9.32 7.85 13.28 7.13 3.55 27.34 39.41 13.64 29.51 24.29 7.70 26.17 36 I4_AR4 ActiveIntronRegion 0 16.11 13.78 28.18 52.62 12.93 44.01 14.86 37.55 32.66 32.69 5.58 4.81 2.61 11.55 14.02 10.07 33.38 42.19 19.64 27.90 22.53 7.18 11.26 37 ER5a ExonRegion 0 183.91 431.23 584.25 443.57 303.93 344.45 445.28 415.14 273.17 528.19 786.40 318.52 231.09 584.47 645.21 812.99 690.76 830.30 550.15 517.27 437.20 241.38 304.52 38 E5a_E6b KnownJunction 0 286.27 681.39 717.95 573.15 356.11 542.47 657.32 508.91 311.69 583.12 1097.23 307.00 253.88 796.17 936.90 930.44 869.28 844.57 708.82 674.01 480.69 255.77 324.29 39 ER6a ExonRegion 0 10.16 10.60 20.08 16.76 6.39 11.61 16.50 21.51 14.93 18.00 4.31 6.20 2.24 3.78 9.02 20.46 20.24 34.26 10.87 30.79 10.48 4.45 17.06 40 E6_Ab KnownBoundary 0 35.12 16.18 27.17 20.14 11.29 12.55 25.88 25.88 22.08 22.81 5.37 0.00 0.00 0.00 4.45 11.71 8.32 38.63 3.95 47.68 10.69 5.51 18.44 41 ER6b ExonRegion 0 231.96 448.40 753.88 562.58 336.85 446.45 484.45 510.78 340.46 602.10 798.54 318.97 239.30 639.67 709.50 827.09 735.52 773.08 541.78 564.25 447.90 245.44 331.56 42 E6a_E7a KnownJunction 0 356.73 398.48 962.62 691.75 430.98 462.52 555.39 564.03 390.45 658.44 882.28 325.01 276.61 639.89 779.53 894.89 745.21 875.04 656.77 632.84 509.79 310.27 377.30 43 ER7a ExonRegion 0 515.26 426.59 920.67 680.18 378.21 397.36 455.86 584.89 371.61 645.98 954.39 328.05 266.97 688.13 805.38 915.19 758.63 924.86 629.25 597.18 499.48 293.48 407.04 44 E7_Da KnownBoundary 0 355.40 472.22 973.41 709.30 240.58 323.90 319.43 608.84 377.95 638.80 773.67 449.85 305.50 671.03 642.07 861.74 670.97 845.11 594.93 533.71 446.40 302.37 337.01 45 ER7b ExonRegion 0 201.22 384.45 1021.91 677.95 247.44 368.35 356.56 598.11 384.37 652.65 866.35 332.49 239.24 593.23 819.33 791.10 693.65 970.22 540.42 588.07 485.22 242.30 345.22 46 E7b_E8a KnownJunction 0 223.45 358.95 1109.90 752.72 410.02 599.60 704.40 635.54 362.84 719.26 874.54 380.07 220.60 541.35 695.10 729.72 692.94 819.28 662.04 628.43 440.66 259.39 309.36 47 ER8a ExonRegion 0 182.34 292.87 781.29 564.24 261.98 369.59 354.66 456.06 323.79 536.53 675.49 268.92 241.75 527.67 741.78 685.44 575.11 802.41 467.98 492.79 407.45 234.54 307.08 48 E8a_E9a KnownJunction 1 158.84 251.21 970.40 699.98 108.66 203.29 226.25 539.55 330.26 544.09 563.98 406.33 299.66 463.48 1100.19 1151.75 508.93 1172.63 700.16 530.38 406.68 355.22 490.24 49 ER9a ExonRegion 0 104.89 257.56 744.80 469.47 130.49 194.04 238.04 414.63 266.87 501.04 606.21 257.15 220.43 478.32 1034.47 1000.71 599.77 938.53 695.89 538.69 390.36 356.57 411.54 50 E9_Da KnownBoundary 0 107.50 233.45 599.71 359.00 189.47 177.74 291.92 357.26 259.46 513.33 625.05 233.03 155.67 385.19 724.15 703.15 617.39 705.12 581.76 510.89 376.29 253.14 260.27 51 ER9b ExonRegion 0 168.78 118.01 173.51 113.37 70.70 113.40 103.80 120.00 85.50 180.73 237.13 109.55 101.12 160.46 278.41 256.00 234.11 238.13 195.07 144.61 151.95 93.64 109.26