Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNAP29 Gene 0 53.05 55.16 54.47 53.70 76.49 40.86 77.69 75.91 72.34 68.02 70.21 86.61 99.38 93.08 75.75 79.08 74.16 61.20 63.98 62.40 80.24 75.64 60.43 2 215730 Transcript 0 41.60 37.08 31.88 32.01 48.28 30.95 53.88 44.39 42.77 40.97 41.67 52.62 59.44 48.89 52.41 48.77 48.28 40.82 39.48 39.00 46.64 47.74 43.60 3 490458 Transcript 0 27.74 14.39 14.35 23.88 20.78 2.03 14.10 16.21 11.19 14.00 2.33 4.19 4.90 4.50 9.25 16.11 4.98 7.19 7.15 12.77 6.19 4.39 3.54 4 439214 Transcript 0 1.06 1.97 1.77 1.32 5.18 0.59 4.93 2.50 1.20 1.40 0.31 1.07 1.38 1.87 2.52 3.86 1.07 0.74 3.09 2.78 0.74 0.69 0.95 5 ER1a ExonRegion 1 23.71 6.04 4.08 1.56 7.92 15.91 16.42 4.33 4.87 8.31 16.58 0.17 0.00 9.01 41.23 20.08 27.57 20.74 9.94 10.64 11.69 6.67 21.65 6 E1_Ab KnownBoundary 0 82.90 12.30 15.70 11.79 37.78 63.09 54.76 21.56 23.64 30.57 44.43 5.40 0.00 21.66 42.65 61.86 63.49 72.96 46.31 44.87 43.74 19.84 46.95 7 ER1b ExonRegion 1 29.69 13.94 23.63 12.63 10.43 23.09 31.19 21.57 26.81 27.98 54.78 9.83 11.65 71.15 97.44 57.30 69.34 62.39 33.51 35.55 60.12 30.38 35.13 8 E1a_E3a KnownJunction 0 61.86 32.82 68.89 53.01 35.91 90.12 77.42 86.05 100.81 90.93 89.92 51.92 40.91 241.45 215.59 133.30 144.27 167.39 90.92 74.97 116.14 72.26 90.57 9 ER2a ExonRegion 0 2.12 3.94 3.54 2.63 10.36 1.18 9.85 5.00 2.39 2.79 0.62 2.14 2.76 0.80 5.05 7.71 2.13 1.49 6.19 5.56 1.48 1.37 1.90 10 E2_Da NovelBoundary 0 6.74 0.00 5.03 0.00 8.32 0.00 18.55 17.99 7.09 5.86 0.00 0.00 0.00 2.47 12.11 16.75 0.00 14.43 9.60 23.39 0.00 0.00 7.94 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 74.01 52.81 86.40 62.19 98.88 70.42 103.78 118.91 126.19 122.44 218.63 85.29 122.01 238.49 213.60 197.14 214.68 159.27 139.30 116.68 171.35 102.96 112.61 13 E3_Da KnownBoundary 0 14.37 5.99 3.40 13.58 18.85 0.00 4.50 13.14 4.54 4.57 0.00 0.00 0.00 4.77 18.54 0.00 0.00 2.28 8.85 12.08 0.00 0.00 0.00 14 E3a_E4a KnownJunction 0 86.31 33.35 118.12 73.65 123.85 71.89 119.33 180.73 152.89 130.41 241.80 137.74 190.73 209.49 201.00 144.15 280.79 130.45 119.25 101.44 215.05 91.97 125.31 15 ER3b ExonRegion 0 27.74 14.39 14.35 23.88 20.78 2.03 14.10 16.21 11.19 14.00 2.33 4.19 4.90 4.50 9.25 16.11 4.98 7.19 7.15 12.77 6.19 4.39 3.54 16 E3_Db NovelBoundary 0 14.74 22.36 9.82 14.85 32.43 13.00 5.12 20.82 12.76 11.50 7.26 0.00 0.00 4.83 9.27 8.20 13.74 12.85 8.85 14.19 8.65 0.00 0.00 17 Ix_AR1 ActiveIntronRegion 0 4.59 4.07 3.68 7.04 8.03 0.00 1.32 7.49 8.85 6.88 0.00 0.00 0.00 4.87 15.96 2.97 0.00 1.85 1.59 1.77 0.00 2.08 0.98 18 Ix_SR2 SilentIntronRegion 0 10.68 7.77 5.15 6.95 7.49 4.09 9.41 5.60 5.24 4.22 1.16 1.55 2.32 2.49 5.11 4.93 2.55 2.82 5.74 3.82 1.32 2.38 2.01 19 ER4a ExonRegion 0 77.38 34.62 107.59 68.43 123.36 62.05 102.36 153.01 134.67 119.64 191.69 150.78 172.44 275.89 291.58 204.49 220.51 164.00 106.01 127.54 221.63 114.25 131.88 20 E4a_E5a KnownJunction 0 43.56 60.84 140.33 80.54 83.11 56.33 103.16 201.06 170.80 131.76 150.93 139.10 146.74 242.57 237.22 145.77 185.60 227.29 63.34 129.62 158.83 101.10 91.25 21 E4a_E6a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.64 1.77 5.86 2.37 0.00 0.00 9.30 10.01 0.00 0.00 0.00 0.00 0.00 0.00 2.76 3.24 22 Ix_AR2 ActiveIntronRegion 0 13.15 1.04 3.63 11.57 8.33 0.28 13.71 3.51 2.51 6.98 2.01 0.00 1.96 2.64 0.00 2.58 1.72 0.00 1.72 2.32 1.15 1.00 1.47 23 E5_Aa NovelBoundary 0 3.11 0.00 17.65 12.42 11.63 2.21 3.97 9.78 10.42 5.53 2.68 0.00 0.00 4.71 0.00 0.00 4.02 8.75 0.00 5.11 3.15 0.00 3.76 24 ER5a ExonRegion 0 61.04 64.50 114.58 85.37 82.06 70.76 87.57 161.24 149.04 133.39 188.02 180.57 173.53 314.32 253.82 233.87 225.86 140.78 165.00 119.38 215.07 126.02 144.34 25 E5a_E6a KnownJunction 0 27.49 54.73 110.17 73.65 101.02 82.68 87.13 172.84 141.55 147.58 138.93 136.84 91.71 258.64 160.70 129.54 230.76 104.05 148.90 125.79 191.08 134.53 167.82 26 Ix_AR1 ActiveIntronRegion 0 8.66 2.03 2.45 5.82 0.00 7.17 10.95 16.18 4.94 5.73 0.00 0.00 0.00 0.00 0.00 5.40 3.30 7.39 0.00 9.67 4.41 2.08 11.48 27 ER6a ExonRegion 0 61.05 68.69 105.21 78.29 167.62 77.27 126.38 150.74 136.32 164.73 178.35 135.90 185.71 249.86 221.71 157.31 178.20 100.39 105.61 116.95 180.30 135.43 107.70 28 E6_Da KnownBoundary 0 115.06 84.66 78.06 70.85 279.03 83.76 222.09 170.74 130.93 183.68 119.19 107.59 262.32 251.63 296.56 142.61 152.13 58.78 96.00 85.01 107.00 227.18 100.64 29 ER6b ExonRegion 0 59.49 68.13 59.67 62.47 88.65 46.00 91.34 84.45 80.68 73.63 66.77 105.07 118.87 88.77 63.58 77.47 68.99 60.90 69.02 67.36 81.60 88.80 65.54