Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CECR5	Gene	0	28.89	51.96	79.69	79.86	32.93	52.74	41.65	53.17	36.42	68.20	126.24	25.17	16.73	94.16	99.84	49.84	67.36	69.80	67.57	77.58	28.79	33.26	32.37
2	155674	Transcript	0	0.46	0.31	0.85	0.04	0.58	0.60	0.83	0.01	0.42	0.28	1.29	0.80	0.00	1.17	2.58	0.22	0.87	1.01	1.37	0.96	0.05	0.04	0.67
3	336737	Transcript	0	9.71	18.80	16.69	4.79	4.44	21.11	6.94	8.90	5.96	14.78	50.65	8.70	9.90	28.47	6.85	20.99	27.08	10.61	12.07	16.45	6.89	0.45	11.92
4	399852	Transcript	0	0.00	0.00	0.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.12	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	480451	Transcript	0	4.78	11.72	13.71	15.88	2.29	3.06	3.33	6.38	7.61	11.07	14.83	0.00	3.41	7.81	13.26	8.16	17.01	16.58	13.40	8.49	3.56	9.53	10.58
6	463033	Transcript	0	0.00	0.00	1.60	2.06	0.00	2.21	2.12	0.00	0.00	0.00	0.00	0.00	0.00	2.41	0.00	0.00	0.00	2.40	0.00	0.00	0.00	0.00	0.00
7	477157	Transcript	0	14.97	19.45	15.19	39.43	13.85	18.61	19.04	22.24	16.17	27.13	22.65	12.05	10.97	19.28	15.52	13.94	15.42	26.85	16.29	25.47	5.85	8.25	10.55
8	486462	Transcript	0	2.96	5.92	3.78	11.39	0.00	0.00	0.00	2.42	1.33	2.04	2.47	11.10	0.00	0.00	0.00	8.03	0.00	8.91	25.51	0.00	2.84	0.00	6.83
9	ER1a	ExonRegion	0	1.37	0.26	2.56	0.12	1.73	1.79	2.33	0.02	1.25	0.33	0.64	0.00	0.00	2.08	4.52	0.00	1.50	1.80	4.11	2.88	0.14	0.11	2.01
10	E1_Da	NovelBoundary	0	16.67	9.54	7.30	21.31	7.72	17.89	8.52	7.48	5.12	4.89	0.00	0.00	0.00	2.12	8.90	0.00	0.00	1.78	11.58	6.14	5.19	0.00	0.00
11	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	Ix	Intron	0	5.85	15.69	8.73	17.67	14.85	8.80	3.92	14.18	11.36	8.90	1.16	5.18	2.56	1.94	4.55	2.48	1.98	4.03	14.88	8.21	1.46	1.25	3.71
13	Ix_SR1	SilentIntronRegion	0	5.86	15.70	8.73	17.68	14.86	8.81	3.92	14.20	11.37	8.91	1.16	5.18	2.56	1.94	4.55	2.49	1.98	4.04	14.89	8.21	1.47	1.25	3.72
14	E2_Ab	NovelBoundary	0	3.11	10.33	2.54	1.33	6.45	27.31	21.77	5.59	1.27	7.12	23.16	5.85	0.00	17.95	13.72	20.34	32.54	11.69	19.48	18.73	2.47	0.00	11.10
15	ER2a	ExonRegion	0	0.83	3.01	1.28	0.59	5.24	11.96	7.83	2.03	1.07	3.99	12.02	0.00	0.00	6.85	4.79	8.66	11.34	3.78	7.48	7.40	1.25	0.91	5.75
16	ER2b	ExonRegion	1	23.28	60.96	9.80	5.56	22.39	77.82	31.17	6.24	5.88	14.50	109.71	4.33	5.07	47.68	61.73	58.38	66.81	14.63	83.88	33.09	19.91	21.65	21.13
17	E2_Ac	KnownBoundary	0	27.41	40.52	6.62	14.98	30.05	75.18	19.17	8.71	4.89	24.74	61.49	0.00	0.00	21.13	57.11	41.70	36.75	34.07	36.90	6.52	14.21	7.10	29.54
18	ER2c	ExonRegion	0	13.20	28.32	19.49	11.13	11.21	40.39	9.74	8.52	8.73	16.36	63.69	7.11	6.70	32.71	29.91	35.59	24.29	19.75	28.74	16.72	9.81	3.03	22.93
19	E2_Da	KnownBoundary	0	0.00	0.00	1.77	0.00	3.06	4.88	0.00	0.00	0.00	1.10	2.11	0.00	0.00	0.00	5.19	3.67	0.00	4.89	0.00	5.24	3.15	0.00	0.00
20	E2a_E3a	KnownJunction	1	18.60	34.60	32.11	8.99	3.65	30.27	6.05	15.77	10.85	25.57	89.29	17.41	19.80	50.09	8.90	33.32	42.82	17.45	16.66	25.50	12.54	0.00	18.10
21	E2a_E4a	NovelJunction	0	0.00	8.95	3.43	0.00	10.53	4.94	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	9.64	0.00	12.81	2.57	0.00	0.00	3.15	0.00	0.00
22	E2a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER2d	ExonRegion	0	0.00	1.15	4.05	2.39	0.84	0.84	0.48	0.07	1.14	3.21	5.08	0.00	0.00	5.79	8.23	8.02	9.43	5.23	0.64	7.84	0.94	2.96	1.09
24	E2_Ad	KnownBoundary	0	3.63	9.08	13.10	9.59	3.99	0.00	0.00	0.00	2.69	9.03	4.63	0.00	0.00	9.65	5.19	12.22	3.83	29.93	4.80	12.14	3.15	8.76	0.00
25	ER2e	ExonRegion	0	2.32	14.15	20.71	23.37	7.37	11.07	11.59	9.89	9.47	15.14	11.97	0.34	1.58	22.02	20.66	7.19	18.63	31.45	19.62	19.48	9.80	10.78	11.65
26	E2_Db	NovelBoundary	0	3.78	5.46	18.89	36.39	7.13	13.80	17.84	10.97	9.78	12.22	0.00	0.00	0.00	19.25	5.44	0.00	12.72	11.98	18.26	20.39	9.08	25.29	11.52
27	E2b_E3a	KnownJunction	0	9.56	22.30	23.36	29.37	3.74	5.28	6.18	12.69	14.09	18.94	24.59	0.00	6.82	9.83	18.30	8.29	24.59	27.94	26.17	9.14	6.18	16.10	20.06
28	E2b_E4a	KnownJunction	0	0.00	0.00	1.60	2.06	0.00	2.21	2.12	0.00	0.00	0.00	0.00	0.00	0.00	2.41	0.00	0.00	0.00	2.40	0.00	0.00	0.00	0.00	0.00
29	I2	Intron	0	7.14	22.29	13.41	19.70	13.04	15.99	28.55	7.98	8.91	11.62	9.45	10.99	9.07	23.58	13.89	11.62	16.68	14.67	18.92	19.89	5.97	10.23	12.80
30	I2_SR1	SilentIntronRegion	0	5.33	20.60	13.36	18.59	11.65	13.29	25.48	8.12	8.81	11.16	9.49	8.40	6.79	23.10	13.46	12.37	17.26	16.02	19.93	19.77	6.29	9.05	13.31
31	I2_AR1	ActiveIntronRegion	0	16.58	26.77	16.21	28.24	19.30	29.10	43.44	7.83	9.99	14.41	8.57	31.83	27.25	22.80	16.91	5.42	8.04	4.91	13.66	22.13	1.95	17.63	7.41
32	I2_AR2	ActiveIntronRegion	0	18.87	41.38	9.22	22.13	23.87	35.38	50.80	6.15	8.71	14.02	10.47	14.11	12.43	32.66	15.50	10.98	23.60	11.03	12.32	17.94	8.39	15.36	14.58
33	E3_Aa	NovelBoundary	0	9.19	37.95	16.08	30.47	7.56	39.98	49.15	4.44	9.23	22.51	9.37	19.66	0.00	36.14	13.85	7.95	23.38	26.12	12.05	11.31	8.71	11.51	20.32
34	ER3a	ExonRegion	0	16.23	62.31	138.25	96.63	45.11	73.57	50.70	82.83	49.28	125.68	294.73	44.38	28.39	189.61	123.91	107.38	164.83	144.91	149.09	147.94	63.06	64.51	80.21
35	E3_Da	NovelBoundary	0	7.56	18.22	16.85	15.65	4.07	31.97	27.51	7.27	7.06	4.67	6.90	0.00	5.84	24.19	4.45	7.78	12.90	23.17	9.51	14.89	6.18	9.19	7.94
36	E3a_E4a	KnownJunction	0	31.04	174.44	225.75	138.11	88.12	175.69	114.51	120.72	72.42	173.64	361.51	66.32	46.10	210.43	151.55	75.71	184.57	159.39	108.80	238.35	80.56	78.87	64.11
37	I3	Intron	0	2.64	15.84	13.66	24.90	9.87	18.49	27.30	5.36	11.47	15.10	7.64	5.42	3.21	19.57	11.20	9.41	17.83	20.56	24.51	16.79	6.41	9.85	12.06
38	I3_SR1	SilentIntronRegion	0	2.58	12.90	9.39	23.99	9.65	19.34	26.55	5.56	9.40	13.30	6.89	0.87	1.76	17.62	13.15	8.05	15.42	21.28	22.18	13.65	5.46	11.03	10.11
39	I3_AR1	ActiveIntronRegion	0	2.70	18.51	17.51	25.81	10.09	17.80	28.07	5.20	13.35	16.75	8.33	9.48	4.52	21.37	9.50	10.67	20.05	20.00	26.67	19.65	7.28	8.84	13.84
40	E4_Aa	NovelBoundary	0	0.00	9.87	43.76	28.83	11.46	16.18	25.00	0.00	11.55	12.81	5.05	0.00	0.00	18.95	5.07	29.99	4.49	18.49	27.48	20.58	5.44	14.57	23.05
41	ER4a	ExonRegion	0	42.75	117.95	214.53	160.46	70.69	153.12	96.53	124.90	74.96	190.35	429.76	98.80	50.00	258.48	201.33	125.41	247.07	189.11	178.49	194.02	92.93	81.22	84.93
42	E4b_E5a	KnownJunction	0	71.12	147.67	263.00	205.50	12.56	90.29	50.30	128.32	73.87	226.66	362.83	112.24	52.59	267.82	287.16	256.94	223.00	267.71	278.69	188.62	76.17	137.04	140.42
43	ER4b	ExonRegion	0	57.15	111.85	237.72	190.80	29.43	75.19	50.31	126.18	72.87	222.50	373.05	108.24	56.28	280.97	287.22	243.71	217.86	264.23	308.98	197.87	77.13	150.01	126.28
44	I4	Intron	0	6.79	7.23	13.07	10.63	6.61	10.23	12.88	6.36	5.82	9.70	15.65	3.16	5.18	21.86	18.74	22.74	18.42	16.60	12.58	15.65	6.96	7.92	9.28
45	I4_AR1	ActiveIntronRegion	0	5.80	5.58	10.51	7.24	5.14	6.03	11.25	3.53	3.03	8.90	8.48	5.73	3.40	19.98	10.48	16.30	14.46	8.06	11.35	15.17	8.45	9.13	11.26
46	I4_SR1	SilentIntronRegion	0	9.31	7.32	8.40	10.97	5.89	9.17	13.50	5.67	5.15	11.28	13.53	2.14	7.89	26.94	18.57	27.34	18.49	15.06	10.19	19.57	4.41	5.00	8.22
47	I4_AR2	ActiveIntronRegion	0	4.37	7.22	15.09	9.42	10.15	11.69	14.04	5.61	9.82	8.79	15.32	2.37	5.98	22.89	18.89	21.43	21.61	18.90	15.04	15.88	9.98	6.95	8.50
48	I4_SR2	SilentIntronRegion	0	9.53	14.16	17.66	15.74	8.71	8.50	17.49	9.65	8.67	8.46	21.91	5.90	7.65	16.70	21.56	24.43	15.60	20.77	9.59	13.53	7.84	12.49	11.98
49	I4_SR3	SilentIntronRegion	0	5.09	4.37	18.19	11.37	3.26	15.98	9.06	9.59	3.09	10.74	21.59	1.10	1.19	21.03	23.11	24.19	23.38	22.28	17.27	12.33	6.20	8.61	9.50
50	I4_AR4	ActiveIntronRegion	0	4.61	0.00	6.54	7.67	5.46	12.12	8.90	2.27	2.83	9.47	14.78	0.00	0.00	19.27	26.51	19.35	13.01	14.71	13.87	15.19	1.86	5.31	1.38
51	E5_Aa	NovelBoundary	0	10.08	8.09	40.45	29.90	8.49	13.17	24.20	22.84	18.40	23.88	31.32	6.30	13.96	26.25	48.21	58.19	23.56	51.86	59.67	28.51	8.53	11.70	11.78
52	ER5a	ExonRegion	0	34.04	89.33	212.91	165.53	38.57	96.43	51.80	113.01	72.07	176.43	398.32	78.53	46.85	286.26	308.89	174.91	216.03	208.13	312.23	195.50	90.66	129.82	99.60
53	E5_Da	NovelBoundary	0	2.82	0.00	15.23	21.64	0.00	0.00	2.25	3.98	7.18	17.43	11.58	0.00	6.17	4.89	10.14	4.36	4.30	20.19	8.56	0.00	0.00	2.82	3.84
54	E5a_E6b	KnownJunction	0	30.82	57.95	103.13	64.29	43.63	91.77	59.88	45.47	37.30	72.96	220.69	74.27	39.93	190.48	192.60	74.60	185.79	72.50	150.97	115.88	66.23	66.93	57.53
55	I5	Intron	0	7.49	13.50	13.34	23.37	8.88	12.38	12.90	13.97	8.35	14.01	12.62	3.55	4.73	10.29	9.76	5.59	5.84	22.26	15.86	16.72	5.13	6.68	5.85
56	I5_SR1	SilentIntronRegion	0	6.90	11.80	12.56	20.20	8.25	11.65	10.62	14.13	7.67	11.32	11.46	3.24	4.70	9.74	9.67	4.20	5.01	19.91	16.16	15.35	4.03	5.68	5.37
57	I5_AR1	ActiveIntronRegion	0	9.83	20.10	16.41	35.66	11.37	15.26	21.69	13.50	11.00	24.35	17.13	4.78	4.89	12.52	10.21	10.93	9.04	31.41	14.87	22.07	9.34	10.57	7.74
58	E6_Aa	NovelBoundary	0	16.37	21.64	18.95	35.46	22.75	5.79	10.07	23.99	26.48	37.93	25.80	25.06	5.84	12.54	0.00	11.11	21.79	52.69	21.65	14.38	8.65	14.14	11.10
59	ER6a	ExonRegion	0	8.42	11.33	14.45	45.12	11.67	17.23	17.73	21.44	18.33	27.34	19.56	5.66	5.03	11.13	8.92	7.74	12.99	36.50	23.33	28.49	6.10	10.13	8.04
60	E6_Ab	KnownBoundary	0	44.97	19.47	10.73	42.35	16.81	16.75	12.50	21.60	12.21	20.95	18.79	12.45	6.82	9.77	8.90	8.72	22.35	42.70	15.53	18.73	5.81	9.37	7.60
61	ER6b	ExonRegion	0	33.80	98.29	132.30	108.00	58.38	103.25	74.98	68.20	44.99	119.38	296.49	78.19	49.17	271.52	190.34	98.17	171.15	106.89	137.45	135.85	76.80	77.09	62.29
62	E6_Da	KnownBoundary	0	8.89	15.06	18.83	21.88	22.92	18.74	26.10	15.81	6.48	10.83	22.11	5.70	12.17	35.67	4.45	28.20	3.83	14.34	9.60	24.61	8.53	3.12	8.19
63	E6a_E6d	KnownJunction	0	20.45	109.52	125.10	77.08	51.27	119.31	82.41	60.87	34.84	115.32	270.81	66.17	31.82	306.32	183.32	94.51	141.19	88.75	139.58	107.64	62.15	58.66	48.40
64	E6a_E7a	NovelJunction	0	7.56	5.59	9.88	9.02	12.82	15.50	21.64	10.80	4.60	7.01	10.58	0.00	0.00	9.54	15.45	12.90	9.44	10.69	3.95	6.20	0.00	0.00	4.35
65	ER6c	ExonRegion	0	22.67	34.14	18.90	51.04	26.11	24.30	30.81	22.99	16.92	27.16	29.69	26.33	23.24	25.25	16.18	17.99	18.19	15.95	14.68	25.14	5.26	11.22	11.93
66	E6_Ac	KnownBoundary	0	47.12	40.78	42.37	82.51	50.85	24.13	26.10	22.59	26.10	34.09	24.48	6.30	21.26	22.37	43.64	23.24	4.77	16.71	22.02	46.85	17.48	23.82	16.99
67	ER6d	ExonRegion	0	27.76	32.51	27.69	66.79	18.13	31.56	19.74	27.30	21.67	32.82	34.42	13.70	10.92	27.11	18.85	22.64	19.58	28.65	27.25	22.85	11.05	9.30	11.66
68	E6_Db	KnownBoundary	0	18.82	15.79	10.23	25.67	12.22	19.42	13.16	11.91	11.08	28.66	16.53	0.00	6.33	16.54	22.62	21.11	4.02	39.67	16.94	19.75	8.28	14.94	8.71
69	E6b_E6d	KnownJunction	0	2.96	5.92	3.78	11.39	0.00	0.00	0.00	2.42	1.33	2.04	2.47	11.10	0.00	0.00	0.00	8.03	0.00	8.91	25.51	0.00	2.84	0.00	6.83
70	ER6e	ExonRegion	0	13.81	12.88	12.22	22.15	3.78	14.30	8.56	22.29	13.24	26.89	18.69	4.17	4.63	21.47	21.47	16.09	15.08	28.12	10.87	22.79	6.18	3.41	11.67
71	E6_Ad	KnownBoundary	0	28.89	16.05	6.36	14.25	11.80	27.20	22.48	10.80	3.99	16.41	17.00	0.00	7.95	16.89	4.45	7.26	13.28	15.30	4.33	5.62	5.44	0.00	0.00
72	ER6f	ExonRegion	0	70.17	104.34	200.35	153.20	59.73	139.43	88.65	109.23	69.59	179.83	360.91	79.27	45.98	271.76	261.05	164.10	168.99	215.86	205.11	178.05	76.24	99.55	89.67
73	E6c_E7a	KnownJunction	0	48.16	90.77	236.09	180.43	30.65	128.34	94.38	112.63	46.87	153.73	340.88	61.82	19.48	268.17	278.76	157.05	138.66	166.64	240.76	149.44	58.69	127.55	92.79
74	E6c_E8a	KnownJunction	0	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	4.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
75	E7_Aa	NovelBoundary	0	10.45	29.34	57.06	12.92	28.69	26.58	43.72	16.55	28.30	22.56	14.85	0.00	0.00	9.59	15.33	0.00	4.49	25.08	3.95	11.95	2.90	2.51	0.00
76	ER7a	ExonRegion	0	49.49	95.77	213.82	151.53	57.52	126.57	91.00	115.51	78.65	139.43	323.41	42.15	26.68	268.40	247.90	124.12	157.87	198.62	171.76	179.98	78.18	76.79	77.11
77	E7a_E8a	KnownJunction	1	99.20	165.89	283.99	185.99	103.40	142.65	148.43	117.43	100.58	142.58	454.33	18.46	17.37	313.15	298.29	143.38	191.87	193.84	174.59	233.30	92.85	88.73	106.96
78	E8_Aa	NovelBoundary	0	13.63	9.08	6.00	9.12	0.00	2.50	8.74	7.15	5.70	7.55	6.84	0.00	6.17	2.30	0.00	3.93	8.42	3.90	0.00	2.94	0.00	0.00	0.00
79	ER8a	ExonRegion	1	70.60	129.40	231.62	187.62	79.02	120.52	95.62	146.55	98.26	169.33	326.91	35.24	16.48	242.17	331.79	110.23	160.99	152.06	148.03	212.89	72.09	80.16	70.75
80	E8_Da	KnownBoundary	0	36.08	32.23	66.79	42.88	26.57	37.59	25.13	29.16	16.32	28.15	52.28	0.00	0.00	21.84	53.03	18.80	33.75	24.71	37.93	39.76	19.95	7.72	15.79
81	E8_Db	KnownBoundary	0	22.37	21.71	44.76	25.50	3.48	27.54	17.05	39.68	18.58	42.87	22.64	0.00	0.00	11.48	12.11	8.29	4.68	20.06	12.05	19.62	5.68	0.00	7.17
82	ER8b	ExonRegion	0	66.32	62.36	101.71	60.42	49.95	66.02	54.72	65.68	32.11	66.52	111.46	12.99	10.94	79.04	118.95	26.75	49.51	48.04	48.84	68.08	22.04	18.75	45.03
83	ER8c	ExonRegion	0	37.35	40.35	38.03	25.80	49.71	52.02	39.88	32.20	15.62	32.50	67.52	21.42	4.77	59.67	56.19	25.39	26.64	20.68	31.18	34.30	7.85	12.68	26.69
84	ER8d	ExonRegion	0	2.12	2.03	1.23	0.68	2.68	3.67	2.65	0.00	0.00	1.15	7.73	4.33	0.00	8.12	5.80	5.94	4.95	3.70	3.19	2.13	0.00	0.00	0.00
85	ER8e	ExonRegion	0	0.00	0.68	0.00	0.00	0.00	0.00	0.15	0.00	0.00	0.51	3.22	2.41	0.00	1.44	3.22	0.66	1.10	1.23	0.00	0.00	0.00	0.00	0.00