Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AP001432.2 Gene 0 13.08 32.72 12.54 23.31 23.89 35.43 25.71 11.87 15.52 17.94 18.01 22.68 27.36 16.86 12.07 12.53 12.95 21.09 22.18 30.05 9.51 9.81 16.70 2 440629 Transcript 0 6.74 17.83 8.89 16.99 13.25 24.04 13.92 9.98 9.54 14.13 11.21 11.53 13.91 11.58 7.74 8.92 7.19 16.39 19.99 23.17 4.84 6.84 8.64 3 ER1a ExonRegion 0 0.60 7.58 4.39 8.98 6.98 26.86 5.38 5.43 1.26 7.61 7.58 0.00 0.05 4.42 0.75 7.09 3.84 9.13 18.20 14.72 0.02 0.73 0.92 4 E1_Da NovelBoundary 0 6.52 0.00 4.82 6.46 0.00 13.00 9.01 14.66 17.53 27.72 23.06 0.00 0.00 2.41 0.00 4.10 13.37 2.24 8.85 6.01 0.00 0.00 3.41 5 E1a_E2a KnownJunction 0 0.00 0.00 5.47 11.15 0.00 5.34 0.00 9.24 4.34 11.42 2.58 0.00 0.00 6.95 4.45 4.27 0.00 12.68 17.51 16.68 0.00 5.20 0.00 6 Ix Intron 0 3.42 2.52 3.30 6.76 5.60 9.07 6.80 10.78 11.56 11.06 7.72 3.00 2.60 9.05 5.47 8.48 5.97 14.16 8.49 13.77 8.60 5.55 9.50 7 Ix_SR1 SilentIntronRegion 0 3.87 2.78 1.70 4.68 6.94 10.04 5.73 7.67 8.83 8.98 3.08 6.38 1.63 11.80 4.93 7.55 3.02 15.95 5.80 14.75 8.53 6.22 10.70 8 Ix Intron 0 9.69 13.45 4.88 16.79 10.89 19.12 11.79 12.45 14.51 13.48 7.87 9.56 14.28 10.97 11.26 12.86 14.69 35.17 9.32 14.88 16.24 9.80 17.93 9 Ix_SR1 SilentIntronRegion 0 10.29 13.94 5.31 18.03 11.18 20.19 12.25 13.49 15.42 14.50 8.36 9.73 14.44 11.31 11.66 13.85 15.92 37.79 9.97 15.59 17.08 10.48 18.27 10 Ix_AR1 ActiveIntronRegion 0 3.07 8.46 0.00 3.03 8.11 7.69 6.92 0.89 4.58 2.15 2.56 8.10 13.16 7.65 7.30 1.92 0.96 6.26 2.16 7.48 7.32 2.42 14.97 11 Ix Intron 0 8.45 15.56 6.68 12.16 16.32 18.70 12.77 20.56 16.33 16.67 15.00 6.64 12.69 25.23 12.19 19.11 11.35 38.08 9.54 21.23 19.78 13.40 31.26 12 Ix_SR1 SilentIntronRegion 0 9.39 19.50 7.93 13.95 13.52 16.79 11.94 25.68 15.87 18.88 15.61 8.78 10.82 27.43 12.09 17.95 15.00 36.36 11.77 25.13 22.06 13.82 33.73 13 Ix_AR1 ActiveIntronRegion 0 7.57 11.88 5.52 10.49 18.92 20.49 13.55 15.79 16.75 14.62 14.43 4.64 14.44 23.17 12.28 20.19 7.93 39.70 7.47 17.59 17.66 13.01 28.95 14 Ix Intron 0 11.95 16.38 8.20 20.43 25.02 27.95 23.42 17.31 16.61 16.81 9.35 19.48 29.71 16.02 14.11 16.54 13.76 16.30 9.61 16.66 10.07 13.54 18.72 15 Ix_AR1 ActiveIntronRegion 0 1.54 18.49 4.73 7.37 7.05 10.25 8.91 3.69 3.87 2.35 4.66 10.43 18.55 4.58 3.30 4.73 0.00 4.96 2.46 4.26 1.70 4.45 4.81 16 Ix_SR1 SilentIntronRegion 0 8.74 20.01 4.99 20.42 26.50 33.04 18.89 20.98 21.37 19.63 10.33 16.34 18.39 17.24 9.81 18.90 9.93 19.88 7.44 16.52 13.73 12.48 18.25 17 Ix_AR2 ActiveIntronRegion 0 11.39 22.13 10.91 22.29 24.34 24.01 19.83 21.02 19.99 16.58 12.04 12.47 29.84 19.78 20.62 25.34 18.94 35.16 13.76 20.40 24.53 14.83 31.56 18 Ix_SR2 SilentIntronRegion 0 13.68 20.98 5.43 13.99 36.38 30.67 24.56 18.61 17.25 16.54 6.19 20.02 36.69 11.46 16.98 8.31 10.48 6.16 10.05 7.20 2.77 16.03 13.81 19 Ix_AR3 ActiveIntronRegion 0 4.97 4.66 9.43 17.97 32.03 19.31 25.72 17.38 11.83 16.58 7.27 17.07 31.81 13.57 22.12 19.86 9.57 11.14 4.71 14.60 6.71 11.87 10.90 20 Ix_SR3 SilentIntronRegion 0 8.82 6.97 5.98 22.29 15.24 22.06 15.40 8.30 10.13 16.69 8.12 16.01 19.33 9.36 14.17 5.10 5.82 3.58 4.29 9.59 1.60 8.66 6.19 21 Ix_AR4 ActiveIntronRegion 0 4.91 5.55 6.72 14.12 16.05 30.76 22.21 13.00 11.04 11.65 6.06 19.90 20.47 14.62 7.77 11.35 10.80 16.29 11.73 14.51 9.61 9.09 13.21 22 Ix_SR4 SilentIntronRegion 0 1.85 12.63 8.12 5.00 5.24 22.39 9.10 0.94 7.46 7.17 1.69 14.43 35.76 6.83 5.20 2.97 1.79 0.38 0.00 12.32 0.00 3.56 0.37 23 Ix_AR5 ActiveIntronRegion 0 21.20 21.46 11.27 27.08 28.46 30.11 32.59 19.70 19.43 19.72 12.04 28.05 42.21 20.12 13.44 21.68 21.14 14.24 10.50 24.41 7.26 17.89 24.42 24 E2_Aa NovelBoundary 0 6.74 21.64 13.10 25.37 28.10 55.54 70.88 17.91 26.71 30.84 19.85 57.02 45.94 28.25 32.88 20.42 17.30 20.48 18.82 30.49 33.11 10.16 29.11 25 ER2a ExonRegion 0 19.63 45.91 16.81 30.83 32.77 39.93 36.38 15.26 23.01 23.36 23.48 34.58 41.69 23.39 18.01 15.39 17.73 27.37 24.27 38.10 14.48 14.57 24.99