Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL844908.1 Gene 0 430.14 0.22 0.97 7.05 41.07 7.75 13.44 39.71 12.70 3.14 58.31 5.51 28.24 82.13 39.62 45.42 83.96 0.06 0.21 0.24 0.00 1.15 1.75 2 441379 Transcript 0 154.67 0.03 0.50 1.68 16.45 4.24 7.65 12.74 5.68 0.71 21.35 1.26 7.78 44.16 14.43 14.90 26.30 0.00 0.05 0.04 0.00 1.28 0.34 3 429132 Transcript 0 1.85 0.00 0.00 0.00 5.56 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 38.74 0.00 0.00 0.38 12.86 2.37 2.94 2.79 4.38 0.00 5.36 0.00 1.73 19.72 3.33 2.20 7.32 0.00 0.00 0.00 0.00 0.00 0.00 5 E1a_E2a KnownJunction 0 9.85 0.00 0.00 0.00 0.00 0.00 0.00 3.57 1.16 0.00 0.00 0.00 0.00 10.42 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 6.35 0.00 0.00 0.00 0.00 0.00 0.00 3.46 1.24 0.00 0.00 0.00 0.00 6.50 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 18.38 1.51 0.00 0.00 9.53 2.03 0.00 1.63 2.32 0.00 6.74 0.00 1.44 9.34 3.18 0.00 3.76 0.00 0.00 0.00 0.00 0.78 0.00 9 E2a_E3a KnownJunction 0 23.19 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 2.21 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E2a_E4a KnownJunction 0 3.70 0.00 0.00 0.00 11.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 68.17 0.00 0.40 0.00 9.33 2.86 4.83 5.39 4.25 0.13 15.19 0.00 0.00 28.63 5.53 6.91 15.35 0.00 0.00 0.00 0.00 1.21 0.14 12 E3a_E4a KnownJunction 0 216.19 0.00 1.33 0.00 24.19 10.68 20.93 8.83 7.99 0.00 31.06 0.00 6.17 99.89 21.01 20.68 27.21 0.00 0.00 0.00 0.00 5.14 0.00 13 Ix_SR1 SilentIntronRegion 0 86.88 0.00 0.00 0.00 11.07 0.00 1.65 1.07 0.00 0.00 10.42 0.00 0.00 13.51 2.90 13.56 2.74 0.00 0.00 0.88 0.00 0.00 2.44 14 E4_Aa NovelBoundary 0 222.48 0.00 0.00 3.40 24.02 8.29 8.92 18.52 3.21 0.00 9.27 0.00 0.00 19.31 0.00 10.17 8.51 0.00 0.00 0.00 0.00 0.00 0.00 15 ER4a ExonRegion 1 183.70 0.00 0.97 0.83 17.72 5.96 8.93 13.35 3.56 2.56 50.72 1.53 2.79 54.46 20.33 31.27 70.79 0.80 0.00 0.62 0.00 1.52 5.00 16 E4_Da KnownBoundary 1 52.97 0.00 0.00 2.06 16.81 6.64 3.58 25.38 1.24 4.06 44.12 6.15 6.82 90.59 13.35 42.98 67.79 0.00 0.00 0.00 0.00 0.00 3.16 17 ER4b ExonRegion 0 571.88 0.19 1.24 9.70 52.33 9.55 17.22 53.33 16.34 4.11 74.26 7.54 38.76 104.18 52.25 59.62 107.90 0.00 0.30 0.26 0.00 1.35 1.92 18 IG29 Intergenic 0 1.04 0.66 1.71 1.66 1.69 1.38 3.27 4.57 3.90 2.72 12.61 0.67 1.91 19.71 10.26 9.03 15.68 1.44 1.23 4.51 1.93 1.70 3.23 19 IG29_SR2 SilentIntergenicRegion 0 1.96 1.13 1.38 2.07 3.23 1.92 6.26 6.83 4.89 3.35 29.40 1.21 2.50 47.85 15.77 26.43 38.39 1.20 0.09 5.36 2.70 3.02 7.85 20 IG29_AR3 ActiveIntergenicRegion 0 0.61 0.30 0.79 0.00 0.99 1.42 5.70 4.07 2.05 1.91 35.81 0.34 13.51 48.07 22.65 16.95 40.92 1.84 1.56 6.40 2.40 3.58 9.48 21 IG29_SR3 SilentIntergenicRegion 0 0.00 0.28 0.39 0.37 0.00 0.34 0.38 1.94 0.63 1.15 10.81 0.40 1.15 18.11 5.01 4.17 11.34 1.01 0.59 1.46 1.01 0.62 1.89