Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PIGP Gene 0 29.00 29.13 21.38 17.10 22.65 17.79 12.26 16.36 17.51 19.85 13.35 23.15 20.25 18.25 30.70 16.49 16.49 11.51 25.02 32.65 6.54 16.29 8.64 2 399098 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.12 0.00 0.00 0.00 0.00 0.00 3.93 0.00 0.00 0.00 3 360525 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 399103 Transcript 0 0.71 2.71 0.00 0.00 0.00 3.67 0.00 0.58 0.00 0.38 0.00 0.00 0.00 2.17 0.00 0.00 0.00 0.00 3.19 0.00 0.00 0.00 0.00 5 430792 Transcript 0 2.07 3.37 1.40 0.00 3.01 5.66 0.84 1.52 0.00 1.79 2.30 0.00 1.65 4.46 2.84 2.56 1.60 5.51 7.98 2.99 2.71 0.00 0.16 6 399102 Transcript 0 0.00 0.00 0.00 5.86 0.00 0.00 0.00 0.00 0.00 0.00 4.79 0.00 0.00 2.41 0.00 0.00 0.00 3.40 12.71 0.00 0.00 2.33 0.00 7 464265 Transcript 0 6.80 7.78 6.49 8.16 10.87 9.63 5.86 7.27 12.08 13.78 1.13 6.89 5.62 2.50 3.56 1.54 0.91 5.29 5.53 15.71 0.92 4.29 2.55 8 479152 Transcript 0 6.82 4.98 2.97 2.77 8.73 2.63 1.40 0.46 0.33 1.73 0.85 9.83 5.02 1.74 1.56 0.00 0.00 1.32 1.15 3.29 0.60 1.12 1.11 9 329667 Transcript 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 5.07 4.36 0.00 0.00 4.14 0.00 0.00 0.00 0.00 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.12 0.00 0.00 0.00 0.00 0.00 3.93 0.00 0.00 0.00 11 ER1b ExonRegion 0 64.62 49.28 9.29 6.68 14.56 16.35 4.55 4.82 0.73 1.63 7.09 0.47 3.61 27.57 40.36 25.54 22.12 3.02 12.44 17.92 6.76 14.23 6.21 12 E1a_E1h KnownJunction 0 372.44 241.08 44.20 39.49 42.95 30.38 23.72 22.43 5.03 13.14 40.43 24.91 45.29 67.69 149.33 106.38 52.64 31.55 96.85 90.57 16.31 53.95 11.95 13 ER1c ExonRegion 0 251.29 189.49 37.76 28.99 34.78 38.84 18.66 14.93 4.60 13.14 28.82 27.16 35.81 63.78 132.93 85.92 49.51 22.84 78.48 77.95 16.43 35.99 11.75 14 ER1d ExonRegion 0 0.71 2.71 0.00 0.00 0.00 3.67 0.00 0.58 0.00 0.38 0.00 0.00 0.00 2.17 0.00 0.00 0.00 0.00 3.19 0.00 0.00 0.00 0.00 15 ER1e ExonRegion 0 2.12 6.44 0.61 0.00 0.00 3.67 0.00 1.73 0.62 2.29 1.61 0.00 0.00 4.87 0.48 2.97 0.00 3.08 9.56 3.90 1.84 0.00 0.00 16 ER1f ExonRegion 0 4.14 4.87 2.80 0.00 0.74 5.22 1.69 1.31 0.00 1.20 3.14 0.00 0.00 1.80 3.41 5.13 3.19 4.43 14.49 4.77 3.22 0.00 0.32 17 E1_Ae KnownBoundary 0 3.78 9.80 2.90 0.00 4.33 26.80 6.58 0.00 0.00 1.48 2.53 0.00 0.00 7.18 0.00 12.99 7.29 0.00 3.95 6.52 9.45 0.00 3.41 18 ER1g ExonRegion 0 0.81 5.98 0.75 1.86 4.73 13.86 2.24 1.03 0.00 1.99 1.26 0.00 0.00 8.15 0.39 2.91 3.94 0.78 11.76 3.19 3.39 0.28 2.32 19 E1_Dc KnownBoundary 0 0.00 3.16 0.00 0.00 8.15 5.79 0.00 2.55 0.00 1.67 0.00 0.00 0.00 2.47 4.45 0.00 0.00 2.07 0.00 3.26 2.47 2.88 0.00 20 E1c_E1h KnownJunction 0 0.00 0.00 0.00 5.86 0.00 0.00 0.00 0.00 0.00 0.00 4.79 0.00 0.00 2.41 0.00 0.00 0.00 3.40 12.71 0.00 0.00 2.33 0.00 21 ER1h ExonRegion 0 0.00 1.87 0.00 0.00 5.28 6.10 0.00 1.73 0.00 2.39 1.46 0.00 3.30 7.11 2.27 0.00 0.00 6.59 1.46 1.21 2.20 0.00 0.00 22 E1_Af KnownBoundary 0 0.00 0.00 0.00 0.00 4.33 5.34 0.00 0.00 0.00 2.69 2.68 0.00 6.66 4.59 0.00 0.00 0.00 8.71 0.00 0.00 0.00 0.00 0.00 23 ER1i ExonRegion 0 1.15 0.12 2.10 2.17 0.64 2.00 5.25 2.89 0.00 2.93 0.51 0.00 0.85 3.71 3.10 3.07 2.96 5.25 15.96 0.17 0.58 0.00 3.40 24 E1_Ag KnownBoundary 0 3.41 0.00 0.00 1.47 0.00 0.00 0.00 1.85 0.00 1.58 0.00 0.00 0.00 4.94 4.45 3.67 4.02 2.11 4.61 0.00 2.78 0.00 0.00 25 ER1j ExonRegion 0 15.48 53.93 14.03 5.53 10.50 12.86 1.39 2.78 6.30 8.24 4.03 1.14 0.23 9.40 10.25 4.94 7.51 6.94 9.81 15.58 5.76 5.39 2.26 26 E1_Ah KnownBoundary 0 47.79 110.64 44.00 19.34 14.60 34.64 2.25 4.56 13.28 21.92 11.42 0.00 0.00 16.54 13.97 3.76 22.16 12.64 43.20 20.58 8.28 8.21 3.93 27 ER1k ExonRegion 0 181.65 203.16 111.98 79.83 59.18 40.17 57.19 47.42 64.39 63.88 69.04 38.71 47.90 76.44 104.75 70.64 78.84 64.80 168.02 117.85 44.31 56.86 34.56 28 E1d_E2a KnownJunction 0 6.74 9.01 13.84 12.02 28.78 2.90 2.21 22.47 5.41 15.55 27.01 0.00 6.82 28.31 11.25 20.59 16.83 5.22 16.28 26.21 11.31 5.57 7.26 29 E1d_E3a KnownJunction 0 20.08 12.17 162.92 98.32 90.41 56.44 29.99 66.62 46.76 57.16 72.12 31.66 19.32 119.84 222.88 72.12 48.90 58.41 99.77 158.32 43.24 71.03 15.19 30 E1d_E4a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 5.07 4.36 0.00 0.00 4.14 0.00 0.00 0.00 0.00 31 I1 Intron 0 0.88 2.53 0.00 2.53 5.55 5.32 1.65 1.07 0.76 0.71 1.60 0.00 3.20 13.39 3.75 2.46 1.37 0.77 1.32 7.06 0.00 0.00 0.00 32 I1_AR1 ActiveIntronRegion 0 0.89 2.57 0.00 2.57 5.64 5.41 1.67 1.09 0.78 0.72 1.63 0.00 3.26 13.61 3.81 2.51 1.39 0.78 1.34 7.17 0.00 0.00 0.00 33 E2_Aa NovelBoundary 0 0.00 3.29 1.83 3.23 3.82 12.44 5.61 7.64 2.34 4.57 0.00 18.91 0.00 4.59 10.75 3.42 9.07 1.62 0.00 8.56 0.00 0.00 0.00 34 ER2a ExonRegion 0 20.07 18.28 9.26 13.16 22.08 19.06 12.01 17.53 9.55 16.94 22.43 22.43 13.17 28.96 28.72 36.63 22.23 12.12 25.37 31.41 7.87 11.89 10.74 35 E2_Da NovelBoundary 0 3.11 0.00 1.71 5.59 0.00 7.89 6.62 6.33 2.98 1.05 6.53 0.00 21.10 4.94 5.19 4.02 0.00 8.04 0.00 5.94 0.00 0.00 0.00 36 E2a_E3a KnownJunction 0 33.78 15.19 9.85 13.52 12.14 21.81 20.71 32.65 3.91 9.70 19.95 0.00 20.45 16.19 28.68 32.73 30.48 11.57 17.41 29.59 2.59 11.21 4.10 37 ER3a ExonRegion 0 35.57 99.12 129.03 79.79 147.17 115.76 60.25 73.19 56.97 74.20 66.06 81.01 70.86 108.62 201.10 105.21 88.04 66.92 168.26 165.55 27.35 81.11 23.53 38 E3_Da KnownBoundary 1 0.00 5.59 7.27 1.80 11.12 0.00 7.38 0.00 0.00 4.38 2.68 41.86 13.64 4.83 4.94 0.00 0.00 0.00 0.00 6.07 3.15 0.00 3.16 39 E3a_E4a KnownJunction 0 43.04 167.80 126.93 89.47 102.72 123.11 40.32 70.85 69.47 87.81 73.39 104.28 82.95 98.24 180.36 69.90 72.28 63.76 183.72 139.91 16.49 128.59 25.35 40 E3a_E5a NovelJunction 0 0.00 3.35 0.00 5.46 4.07 5.11 0.00 0.00 0.00 0.00 9.84 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 41 ER3b ExonRegion 0 6.82 4.98 2.97 2.77 8.73 2.63 1.40 0.46 0.33 1.73 0.85 9.83 5.02 1.74 1.56 0.00 0.00 1.32 1.15 3.29 0.60 1.12 1.11 42 E3_Db NovelBoundary 0 9.63 0.00 1.69 4.43 3.48 2.61 11.88 0.00 2.81 5.40 2.58 32.86 0.00 12.30 0.00 4.36 0.00 4.39 0.00 6.14 0.00 0.00 8.71 43 ER4a ExonRegion 0 90.26 209.71 151.12 86.19 87.27 59.38 40.58 93.35 74.62 81.70 97.64 109.26 122.57 107.16 214.11 102.23 114.59 57.26 145.08 128.46 23.22 89.66 39.02 44 E4a_E5a KnownJunction 0 208.04 223.58 135.42 78.98 51.87 42.08 75.92 87.28 78.38 76.56 106.34 101.88 98.53 88.53 154.77 70.75 145.11 35.65 113.23 135.44 25.64 69.19 39.86 45 ER5a ExonRegion 0 108.94 59.20 82.26 58.32 74.72 52.10 27.65 69.29 60.34 70.48 60.98 98.48 102.59 65.04 118.11 44.95 60.25 20.22 64.66 82.47 8.85 80.30 12.80 46 E5_Da KnownBoundary 1 7.11 8.95 2.96 5.29 13.07 14.25 1.94 7.89 16.44 14.18 2.11 66.32 6.33 9.95 4.45 7.86 3.74 2.07 4.61 14.00 2.84 6.25 0.00 47 ER5b ExonRegion 0 19.88 12.83 6.74 10.05 14.93 12.18 12.79 8.37 12.62 12.19 3.64 21.17 11.76 8.67 15.97 10.66 8.65 9.16 14.48 30.56 8.08 6.61 12.33 48 E5_Db KnownBoundary 0 7.56 9.08 9.99 6.89 16.13 8.46 5.87 3.53 7.35 11.58 0.00 16.81 6.17 0.00 0.00 3.67 0.00 2.24 21.74 30.10 3.15 8.27 8.62 49 ER5c ExonRegion 0 6.80 7.78 6.49 8.16 10.87 9.63 5.86 7.27 12.08 13.78 1.13 6.89 5.62 2.50 3.56 1.54 0.91 5.29 5.53 15.71 0.92 4.29 2.55 50 IG16_AR4 ActiveIntergenicRegion 0 7.85 4.91 3.56 5.48 7.77 6.49 0.00 8.60 15.21 9.20 5.23 2.85 0.00 1.82 2.34 0.00 0.00 4.06 5.13 9.50 0.00 1.27 1.36 51 IG16_AR3 ActiveIntergenicRegion 0 3.73 3.66 3.48 7.58 15.41 6.01 0.42 8.71 17.79 7.71 4.18 0.00 0.00 1.43 0.35 0.00 0.00 6.58 4.84 12.77 0.00 0.00 0.00