Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	ZNF295	Gene	0	13.79	64.55	18.80	29.77	28.88	23.19	20.70	21.25	23.79	28.75	27.61	61.38	64.87	35.34	18.04	25.35	34.10	30.56	14.99	41.00	17.28	72.15	32.23
2	398511	Transcript	0	1.89	5.03	0.53	0.77	0.00	0.00	0.63	3.85	5.09	3.92	3.78	15.76	3.67	2.35	2.23	1.71	1.78	12.42	3.11	0.92	4.11	4.44	3.46
3	398497	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	398499	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.34	0.00	0.00	2.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00	0.00	0.00
5	449949	Transcript	0	0.00	0.00	0.00	0.26	0.00	0.00	0.00	0.33	1.15	0.00	0.73	0.00	0.00	1.08	0.00	0.00	0.44	0.00	0.00	0.00	0.00	1.02	1.42
6	310826	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	398505	Transcript	0	3.63	8.09	0.00	2.53	0.00	7.72	0.00	9.90	11.95	6.82	15.64	54.47	33.93	24.43	8.90	23.33	11.78	22.38	0.00	20.26	14.15	43.35	11.44
8	416434	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	465968	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	425521	Transcript	0	0.68	2.70	6.42	2.61	2.27	0.39	1.56	4.94	5.32	1.28	1.66	5.09	3.40	2.68	2.18	2.56	3.54	2.66	2.74	4.80	2.12	1.56	4.40
11	ER1a	ExonRegion	0	0.00	0.00	1.06	0.00	0.00	0.00	1.26	1.26	0.00	0.00	0.35	0.00	0.85	0.00	0.00	0.00	0.00	0.92	2.17	1.84	0.00	1.04	0.00
12	E1_Ad	KnownBoundary	0	0.00	0.00	1.80	4.13	0.00	0.00	2.21	2.38	0.00	1.45	2.42	6.30	6.82	0.00	0.00	0.00	4.02	9.78	4.80	6.39	0.00	5.57	0.00
13	ER1b	ExonRegion	0	1.65	0.00	1.23	0.00	2.08	0.00	3.38	1.73	0.00	0.00	3.65	0.00	4.69	4.33	0.64	0.00	6.97	1.85	6.37	4.26	3.43	10.19	5.22
14	E1_Ae	KnownBoundary	0	3.41	5.66	0.00	2.00	8.23	10.05	17.18	2.42	0.00	0.00	16.43	0.00	6.66	14.07	8.90	22.13	32.73	3.36	4.42	14.25	16.80	32.09	22.96
15	ER1c	ExonRegion	0	2.12	0.00	1.23	0.00	2.68	0.00	3.97	1.73	0.00	0.00	5.80	0.00	4.69	10.29	2.90	0.00	9.90	1.85	6.37	4.26	4.41	18.75	5.87
16	ER1d	ExonRegion	0	2.12	0.00	1.23	0.00	2.68	0.00	3.78	1.73	0.00	0.00	6.63	0.00	9.16	12.45	5.25	0.00	9.90	1.85	6.37	4.26	9.76	21.63	5.87
17	ER1e	ExonRegion	0	2.51	6.03	0.36	1.53	2.35	1.15	4.07	4.05	4.00	4.30	8.71	9.30	7.70	7.86	6.48	8.99	8.97	15.97	4.37	4.28	7.16	20.55	20.85
18	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.93
19	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	3.97	0.00	1.13	0.00	0.00	7.35	6.33	4.94	0.00	0.00	3.55	3.69	0.00	2.62	0.00	0.00	11.44
20	E1a_E6a	KnownJunction	0	3.78	10.06	0.00	1.53	0.00	0.00	0.00	6.45	10.19	7.84	7.21	31.51	6.49	4.71	4.45	3.42	3.55	23.92	4.05	0.00	8.22	7.84	6.91
21	ER2a	ExonRegion	0	0.00	0.00	0.00	0.79	0.00	0.00	0.00	0.99	2.14	0.00	2.20	0.00	0.00	0.77	0.00	0.00	1.31	0.00	0.00	0.00	0.00	0.68	0.34
22	E2_Da	NovelBoundary	0	3.63	0.00	4.88	1.66	0.00	0.00	4.33	4.31	7.06	1.02	4.95	0.00	0.00	11.95	10.01	12.56	0.00	4.44	0.00	0.00	5.62	2.63	25.44
23	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.39	0.00
24	I2	Intron	0	5.00	3.84	6.47	5.04	8.21	1.95	6.25	9.43	7.61	3.43	0.46	13.92	13.81	2.94	7.07	3.87	2.73	4.01	1.50	5.27	1.04	1.48	6.59
25	I2_SR1	SilentIntronRegion	0	5.47	4.20	7.07	5.51	8.98	2.13	6.84	10.31	8.32	3.75	0.50	15.22	15.10	3.22	7.73	4.23	2.98	4.39	1.65	5.77	1.14	1.61	7.20
26	E3_Aa	NovelBoundary	0	3.41	6.64	22.62	10.19	8.49	11.30	4.50	8.75	8.36	1.61	2.68	12.60	5.84	2.47	8.90	3.85	8.23	10.86	0.00	6.52	6.12	3.12	0.00
27	ER3a	ExonRegion	0	1.36	2.70	12.85	5.22	4.54	0.79	3.12	9.88	10.65	2.56	3.31	10.19	6.80	5.35	4.36	5.12	7.07	5.31	5.49	9.59	4.23	3.13	8.81
28	E3_Da	NovelBoundary	0	3.19	3.09	19.57	13.02	3.90	0.00	1.99	15.81	20.69	4.59	2.58	12.00	19.64	0.00	0.00	16.49	4.30	6.51	18.17	2.62	0.00	3.00	7.26
29	E3a_E6a	KnownJunction	0	0.00	2.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E4_Aa	NovelBoundary	0	0.00	2.43	16.06	10.32	0.00	2.90	0.00	8.63	9.87	7.52	0.00	6.30	12.99	4.94	0.00	4.10	22.63	1.95	9.04	5.69	5.68	14.08	11.95
31	ER4a	ExonRegion	0	4.53	2.03	0.15	0.00	2.10	0.00	1.94	0.69	3.61	0.99	7.82	13.06	15.44	8.62	4.55	7.27	20.21	5.43	0.83	3.11	3.66	1.06	11.93
32	E4_Da	NovelBoundary	0	3.48	3.29	18.12	3.23	3.23	0.00	4.33	23.41	7.67	8.03	2.05	0.00	12.99	7.65	4.45	3.25	4.30	5.89	4.42	8.69	7.85	3.12	7.26
33	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	5.37	0.00	6.82	0.00	0.00	10.42	4.58	1.91	0.00	0.00	0.00	0.00	7.94
34	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.34	0.00	0.00	2.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00	0.00	0.00
35	E4a_E6a	KnownJunction	1	3.33	6.58	1.15	0.00	0.00	0.00	0.00	0.00	4.40	3.17	9.27	6.30	0.00	8.83	0.00	0.00	26.55	2.49	4.14	2.49	0.00	5.27	4.35
36	E4a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	I4	Intron	0	2.27	3.74	12.58	6.22	6.15	0.56	1.22	8.28	11.84	6.54	4.14	6.47	16.35	6.45	2.33	9.10	4.55	8.58	8.78	5.87	3.71	4.79	11.24
38	I4_AR1	ActiveIntronRegion	0	2.62	3.98	13.93	6.82	4.90	0.45	1.38	9.22	13.47	7.64	4.55	6.21	17.32	7.26	2.80	9.46	4.64	9.48	9.25	5.99	4.34	5.74	12.94
39	E5_Aa	NovelBoundary	0	0.00	0.00	22.86	5.29	4.33	0.00	3.53	28.59	21.67	2.74	6.90	6.30	6.17	15.42	10.75	8.46	9.44	19.73	4.80	11.82	8.53	14.51	7.60
40	ER5a	ExonRegion	0	0.00	4.57	6.27	2.61	9.61	0.69	3.52	2.61	7.35	2.39	9.60	14.55	22.91	7.19	1.71	19.64	27.11	6.33	4.49	2.96	4.52	3.55	13.67
41	E5_Ab	KnownBoundary	0	0.00	11.58	16.14	7.59	12.05	2.90	10.02	8.34	16.38	9.00	7.74	0.00	13.47	7.06	0.00	21.53	9.07	10.82	8.09	6.01	8.59	8.70	15.88
42	ER5b	ExonRegion	0	2.12	6.25	11.08	6.40	1.26	0.97	2.21	11.66	15.42	3.88	5.85	11.06	35.31	6.90	2.73	23.76	20.09	11.90	9.04	11.93	7.59	8.39	21.69
43	E5_Da	NovelBoundary	0	6.89	2.76	23.77	5.16	0.00	4.83	0.00	13.76	4.72	1.13	0.00	6.30	6.82	0.00	5.07	0.00	7.29	2.57	0.00	2.75	0.00	3.12	12.21
44	E5a_E6a	KnownJunction	0	0.00	0.00	5.38	0.00	3.90	0.00	1.68	7.02	4.98	2.66	6.79	7.65	13.31	7.42	0.00	7.52	0.00	10.40	3.86	8.95	12.48	8.39	8.11
45	ER6a	ExonRegion	1	5.68	9.25	7.38	10.38	6.86	4.10	5.84	18.08	30.90	21.68	49.32	65.40	93.80	64.71	13.12	47.50	76.66	99.02	25.60	75.97	62.85	80.17	65.68
46	E6_Da	KnownBoundary	0	3.11	26.64	9.67	14.85	7.64	4.60	6.01	18.44	25.49	23.05	32.06	123.34	167.85	35.61	12.24	77.59	75.27	145.96	24.57	109.04	37.62	73.24	92.79
47	ER6b	ExonRegion	1	8.37	44.96	8.95	27.28	24.88	25.18	31.00	18.29	40.96	49.16	75.00	120.23	190.67	74.44	17.09	55.43	89.06	87.50	29.33	100.81	54.89	163.68	100.85
48	E6_Db	KnownBoundary	0	62.75	40.12	13.31	37.76	27.93	13.69	16.69	31.26	46.73	75.70	109.82	184.56	270.11	143.03	41.54	124.92	142.03	121.91	78.68	167.27	78.64	360.67	194.37
49	ER6c	ExonRegion	1	5.50	35.07	6.52	20.63	20.58	16.87	21.62	18.97	31.86	35.56	83.22	140.12	213.11	94.62	15.70	65.47	89.17	70.43	38.97	93.10	48.75	147.21	95.42
50	E6_Dc	KnownBoundary	1	6.96	19.08	7.48	21.28	39.56	13.51	43.19	22.22	34.26	35.67	55.96	136.24	174.50	70.58	9.27	74.77	93.60	57.58	38.78	109.55	25.27	160.37	87.33
51	ER6d	ExonRegion	1	5.50	35.84	13.81	20.72	14.89	27.49	22.67	20.12	31.12	30.51	63.89	97.90	96.91	83.85	15.18	61.81	85.40	104.26	31.08	80.16	59.77	109.13	84.88
52	E6_Dd	KnownBoundary	0	7.19	43.74	22.09	18.28	8.40	23.51	27.12	28.88	31.65	29.25	79.13	136.54	100.81	80.23	25.71	66.56	84.81	97.62	34.64	96.26	58.07	133.43	112.42
53	E6d_E6b	KnownJunction	0	3.63	8.09	0.00	2.53	0.00	7.72	0.00	9.90	11.95	6.82	15.64	54.47	33.93	24.43	8.90	23.33	11.78	22.38	0.00	20.26	14.15	43.35	11.44
54	ER6e	ExonRegion	0	9.98	45.32	16.32	10.73	13.80	25.00	19.16	16.53	30.11	32.95	51.46	103.16	88.54	56.95	15.01	53.29	77.20	62.62	21.35	47.18	46.08	102.02	54.85
55	E6_Ab	KnownBoundary	0	3.78	17.83	6.00	4.99	0.00	5.22	14.75	8.30	12.53	26.41	11.37	71.72	26.95	25.08	4.45	21.45	34.88	50.53	9.60	34.77	20.20	20.21	26.04
56	ER6f	ExonRegion	0	5.55	10.70	0.72	1.31	2.83	7.94	4.67	2.21	4.11	2.89	3.46	11.49	11.04	8.82	3.41	9.86	5.36	6.92	2.31	8.42	3.99	10.10	6.89
57	E6_De	KnownBoundary	0	0.00	11.51	2.81	0.00	0.00	7.33	0.00	0.00	7.41	3.87	16.48	0.00	0.00	0.00	0.00	6.32	12.72	37.35	0.00	8.50	4.76	2.82	0.00
58	ER6g	ExonRegion	0	10.83	67.27	19.50	34.63	33.95	26.66	23.67	22.81	23.44	27.76	17.71	59.10	57.49	24.65	21.85	14.25	19.30	8.85	9.21	32.55	3.08	72.32	15.65
59	E6_Df	KnownBoundary	0	14.30	53.81	22.44	38.16	56.54	38.39	24.38	21.11	24.97	34.17	16.64	27.01	55.03	26.78	4.45	3.85	3.93	8.00	0.00	18.34	0.00	47.33	4.35
60	ER6h	ExonRegion	0	34.21	135.03	35.80	56.06	55.26	31.94	27.90	33.69	26.55	43.28	14.44	45.75	40.84	21.55	26.00	12.73	13.58	13.57	14.21	35.77	3.17	62.21	16.38