Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ITGB2 Gene 0 109.39 0.67 4.84 18.54 47.11 29.69 24.81 53.74 63.15 22.01 167.94 16.91 90.09 237.42 207.16 84.20 164.88 0.00 0.00 0.00 0.06 1.31 1.46 2 355153 Transcript 0 0.00 0.00 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.14 3 397850 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 302347 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 498666 Transcript 0 24.75 0.00 0.13 1.70 7.55 1.53 3.44 10.98 9.07 1.21 9.02 1.84 6.17 17.57 14.67 9.16 15.36 0.00 0.00 0.00 0.00 0.00 0.21 6 397846 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 397854 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 397857 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.77 0.00 0.00 0.00 0.00 0.00 0.40 0.61 0.03 0.99 0.00 0.00 0.00 0.00 0.00 0.00 9 397852 Transcript 0 3.98 0.00 0.15 0.32 0.89 1.44 0.50 0.78 1.29 0.52 6.03 0.31 0.56 1.82 7.87 2.19 3.62 0.00 0.00 0.00 0.00 0.00 0.00 10 479849 Transcript 0 4.61 0.00 0.00 0.80 2.51 0.00 0.68 2.51 2.02 0.88 11.60 0.00 4.25 29.42 17.80 6.38 26.06 0.00 0.00 0.00 0.00 0.00 0.00 11 320216 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 475170 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 479202 Transcript 0 2.80 0.01 0.09 0.20 1.07 0.35 0.28 1.15 0.59 0.20 1.35 0.11 0.65 3.28 2.78 1.32 1.95 0.00 0.00 0.00 0.00 0.00 0.01 14 ER1a ExonRegion 0 0.00 0.00 0.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 15 E1_Ab KnownBoundary 1 1471.00 0.00 0.00 6.06 39.05 11.41 36.79 51.34 14.96 1.53 31.27 5.40 13.64 82.76 39.31 11.36 65.83 0.00 4.80 0.00 0.00 0.00 7.85 16 ER1b ExonRegion 0 0.00 0.00 0.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.18 0.00 0.10 0.00 0.00 0.00 0.00 0.00 1.28 17 E1_Da NovelBoundary 1 317.54 3.35 0.00 9.49 27.33 6.02 7.91 4.85 20.40 1.50 51.12 0.00 32.30 109.78 40.30 21.45 61.15 0.00 0.00 0.00 0.00 0.00 3.93 18 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1a_E4b KnownJunction 0 0.00 0.00 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 Ix_SR1 SilentIntronRegion 0 86.88 0.00 0.00 0.00 11.07 0.00 1.65 1.07 0.00 0.00 10.42 0.00 0.00 13.51 2.90 13.56 2.74 0.00 0.00 0.88 0.00 0.00 2.44 21 ER2a ExonRegion 0 0.44 0.00 0.00 0.00 1.47 1.03 0.54 0.00 0.71 0.00 10.77 0.00 1.39 11.23 18.75 2.55 12.77 0.00 0.00 0.00 0.99 0.00 0.00 22 E2_Ab KnownBoundary 0 3.48 0.00 0.00 0.00 0.00 0.00 2.25 0.00 1.77 0.00 8.84 0.00 5.84 7.06 4.45 8.63 13.18 0.00 0.00 0.00 2.59 0.00 0.00 23 ER2b ExonRegion 1 38.46 0.00 0.13 0.38 13.25 14.15 13.07 5.32 6.95 1.90 93.11 0.00 0.66 183.25 142.16 57.40 72.83 0.00 0.00 0.00 0.34 0.10 1.10 24 E2_Ac KnownBoundary 1 143.73 0.00 0.00 0.00 64.52 71.15 32.15 11.01 13.80 4.65 153.35 5.55 13.31 348.46 273.57 132.79 161.76 0.00 0.00 0.00 0.00 0.00 4.35 25 ER2c ExonRegion 1 258.78 0.00 4.69 10.44 111.01 126.71 62.23 38.41 32.17 12.73 315.20 1.58 5.15 393.99 386.43 212.98 328.80 0.00 0.00 0.00 0.00 2.08 1.93 26 E2_Ad KnownBoundary 1 509.28 0.00 10.32 19.34 194.40 212.26 96.14 56.15 64.24 19.85 420.79 11.85 26.62 354.64 360.34 264.55 429.83 0.00 0.00 0.00 0.00 2.39 0.00 27 ER2d ExonRegion 1 261.39 0.00 6.52 14.51 78.93 122.16 47.55 45.24 55.83 21.86 298.01 7.64 20.83 172.87 263.50 144.06 264.95 0.00 0.00 0.00 0.00 0.43 0.00 28 E2a_E4b KnownJunction 1 191.66 0.00 7.33 17.01 48.81 66.50 25.97 42.10 63.60 28.29 208.84 31.96 26.62 79.17 173.06 89.46 151.29 0.00 0.00 0.00 0.00 0.00 0.00 29 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.79 1.55 0.00 0.00 0.00 0.00 0.00 0.80 1.23 0.07 1.98 0.00 0.00 0.00 0.00 0.00 0.00 30 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER4a ExonRegion 0 3.98 0.00 0.15 0.32 0.89 1.44 0.50 0.78 1.29 0.52 6.03 0.31 0.56 1.82 7.87 2.19 3.62 0.00 0.00 0.00 0.00 0.00 0.00 32 E4_Ab KnownBoundary 0 7.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER4b ExonRegion 1 55.56 0.00 3.79 6.41 16.36 21.59 8.97 20.86 43.17 12.93 152.26 22.63 27.07 95.12 126.60 65.12 126.26 0.00 0.00 0.00 0.00 0.00 0.00 34 E4_Ac NovelBoundary 0 18.30 0.00 2.81 2.73 3.65 2.27 0.00 9.36 16.23 3.71 79.07 12.00 6.82 61.04 50.31 23.41 67.51 0.00 0.00 0.00 0.00 0.00 0.00 35 E4a_E5a KnownJunction 1 3.41 0.00 2.90 9.62 0.00 4.71 0.00 18.77 38.71 6.53 241.43 24.76 67.53 246.28 194.94 40.93 248.53 0.00 0.00 0.00 0.00 0.00 7.34 36 ER4c ExonRegion 1 9.66 0.00 3.37 7.50 2.01 1.95 0.17 20.63 38.29 7.31 193.41 18.94 34.88 194.29 154.67 36.78 202.18 0.00 0.00 0.00 0.00 0.00 4.40 37 ER4d ExonRegion 0 4.61 0.00 0.00 0.80 2.51 0.00 0.68 2.51 2.02 0.88 11.60 0.00 4.25 29.42 17.80 6.38 26.06 0.00 0.00 0.00 0.00 0.00 0.00 38 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 1.67 22.48 0.00 6.66 12.24 15.95 11.79 8.60 0.00 0.00 0.00 0.00 0.00 0.00 39 ER4e ExonRegion 0 2.89 0.00 0.00 0.91 1.16 0.00 0.04 0.81 1.24 1.19 13.27 0.00 6.10 18.08 12.09 12.98 10.01 0.00 0.00 0.00 0.00 0.00 0.00 40 ER5a ExonRegion 1 26.63 0.00 8.41 11.71 12.69 3.73 4.52 38.16 61.23 29.95 355.61 13.57 44.00 439.10 385.18 139.52 358.57 0.00 0.00 0.00 0.00 1.19 9.30 41 E5a_E6a KnownJunction 0 0.00 0.00 8.87 0.00 0.00 0.00 0.00 0.00 0.00 9.32 0.00 0.00 0.00 0.00 0.00 35.97 23.38 0.00 0.00 0.00 0.00 0.00 0.00 42 E5a_E7a KnownJunction 0 61.49 0.00 3.16 18.18 24.45 14.88 25.35 68.18 83.82 29.36 249.54 11.55 67.85 551.07 573.21 237.54 232.82 0.00 0.00 0.00 0.00 0.00 0.00 43 ER6a ExonRegion 0 3.82 0.00 3.14 0.00 1.35 0.00 1.36 1.99 0.96 5.21 1.99 0.00 0.00 1.39 3.86 7.37 16.76 0.00 0.00 0.00 0.00 0.00 0.00 44 ER7a ExonRegion 0 51.93 0.49 3.51 23.17 108.46 78.45 45.76 73.24 94.93 39.97 313.71 27.22 108.80 414.53 438.27 159.12 297.96 0.00 0.00 0.00 0.00 1.11 0.60 45 E7a_E8a KnownJunction 0 125.87 2.50 4.38 43.92 69.19 75.81 64.96 132.96 141.84 60.33 362.51 36.76 216.71 532.46 548.86 228.57 475.36 0.00 0.00 0.00 0.00 2.27 3.84 46 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER8a ExonRegion 0 141.81 0.08 4.82 37.59 44.60 35.26 28.82 126.92 138.92 65.66 475.01 49.45 248.16 646.72 603.68 231.90 439.64 0.00 0.00 0.00 0.00 4.12 2.90 48 E8a_E9a KnownJunction 0 127.80 0.00 1.63 39.02 84.80 30.55 24.51 105.72 137.61 73.79 454.27 38.41 160.70 555.89 466.16 237.12 343.62 0.00 0.00 0.00 0.00 3.12 0.00 49 ER9a ExonRegion 0 159.39 2.08 6.33 34.35 91.57 68.58 44.26 112.51 140.88 59.76 499.70 54.44 357.41 682.00 623.12 230.06 428.91 0.00 0.00 0.00 0.50 3.29 2.45 50 E9a_E10a KnownJunction 0 105.65 2.50 1.15 36.03 92.02 48.15 46.81 77.88 150.32 50.18 371.25 30.01 244.46 518.16 448.48 140.56 335.67 0.00 0.00 0.00 0.00 0.00 0.00 51 ER10a ExonRegion 0 116.77 1.97 7.05 30.10 88.32 68.59 49.28 95.45 128.49 44.83 352.32 45.85 321.48 580.00 529.66 201.44 331.40 0.00 0.00 0.00 0.66 3.18 4.57 52 E10a_E11a KnownJunction 1 183.00 2.57 9.55 61.43 149.58 118.80 75.39 127.74 198.35 47.33 408.37 87.63 422.21 674.44 576.55 256.26 333.99 0.00 0.00 0.00 0.00 5.88 3.67 53 ER11a ExonRegion 0 192.85 0.19 9.74 57.45 130.64 109.03 78.73 129.94 194.05 51.52 559.39 68.01 392.25 794.18 604.46 290.31 450.13 0.00 0.00 0.00 0.00 8.31 5.48 54 E11a_E12a KnownJunction 0 239.52 0.00 6.48 74.78 160.27 112.83 80.42 139.49 187.06 51.82 531.13 49.82 391.21 796.52 721.80 395.11 535.30 0.00 0.00 0.00 0.00 15.12 12.04 55 ER12a ExonRegion 0 245.54 3.37 11.76 72.54 143.57 72.84 68.57 148.86 199.37 61.83 548.04 63.31 367.28 702.90 455.17 250.62 540.10 0.00 0.00 0.00 0.00 8.61 6.98 56 E12_Da KnownBoundary 0 66.23 0.00 0.00 0.00 8.15 4.88 10.42 10.10 16.78 2.98 13.74 0.00 13.80 21.84 13.35 11.11 35.06 0.00 0.00 0.00 0.00 0.00 0.00 57 E12a_E12c KnownJunction 0 345.76 0.00 14.58 67.69 192.53 84.38 73.18 173.91 218.11 66.54 629.74 106.38 287.97 831.07 414.98 325.47 638.43 0.00 0.00 0.00 0.00 14.21 11.78 58 ER12b ExonRegion 0 51.33 0.00 0.39 3.07 12.53 3.81 5.49 21.07 19.45 2.55 16.38 2.41 12.80 30.25 21.72 17.74 28.45 0.00 0.00 0.00 0.00 0.00 0.00 59 E12_Ab KnownBoundary 0 24.08 0.00 0.00 0.00 3.74 0.00 3.53 4.07 6.54 0.00 13.90 6.00 12.01 32.96 13.35 0.00 12.53 0.00 0.00 0.00 0.00 0.00 0.00 60 ER12c ExonRegion 1 49.67 0.00 0.22 3.65 17.36 6.69 5.51 17.12 17.96 2.44 15.85 6.28 27.90 32.77 22.50 18.42 24.55 0.00 0.00 0.00 0.00 0.03 0.02 61 E12_Ac KnownBoundary 0 96.39 0.00 0.00 9.32 25.30 5.00 3.89 16.68 25.09 8.06 7.74 0.00 32.95 18.89 28.80 20.76 24.68 0.00 0.00 0.00 0.00 0.00 0.00 62 ER12d ExonRegion 0 290.54 1.53 18.94 81.69 164.37 104.37 79.67 136.73 209.79 65.99 553.94 81.89 386.99 789.23 582.61 308.72 570.30 0.00 0.00 0.00 0.00 8.65 4.91 63 E12_Db KnownBoundary 0 13.41 0.00 0.00 3.50 3.82 0.00 0.00 7.15 6.48 0.00 9.53 0.00 19.80 8.95 14.09 15.47 8.42 0.00 0.00 0.00 0.00 0.00 0.00 64 E12b_E13a KnownJunction 0 175.81 0.00 12.98 59.53 105.09 82.96 82.76 120.10 171.61 73.39 421.11 37.06 245.44 559.13 382.72 191.83 468.35 0.00 0.00 0.00 0.00 0.00 0.00 65 ER12e ExonRegion 0 22.91 0.00 0.00 2.03 10.13 0.77 4.84 11.87 7.77 1.07 10.66 3.09 5.70 22.45 22.29 9.73 17.63 0.00 0.00 0.00 0.00 0.00 0.62 66 E12_Dc NovelBoundary 0 20.74 0.00 0.00 0.00 22.92 2.50 9.63 15.57 13.74 2.42 36.32 21.31 20.94 29.14 23.24 7.60 44.41 0.00 0.00 0.00 0.00 0.00 0.00 67 E12c_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 I12 Intron 0 35.12 0.00 0.00 0.88 10.69 0.96 4.72 11.64 9.12 0.15 10.58 0.93 8.53 22.23 16.80 10.07 19.50 0.00 0.00 0.00 0.00 0.00 0.26 69 I12_SR1 SilentIntronRegion 0 33.62 0.00 0.00 0.00 13.98 1.15 5.53 4.86 5.39 0.36 8.06 1.49 8.25 17.50 10.81 6.83 11.04 0.00 0.00 0.00 0.00 0.00 0.61 70 I12_AR3 ActiveIntronRegion 0 36.40 0.00 0.00 1.52 8.40 0.82 4.16 16.56 11.84 0.00 12.44 0.53 8.79 25.75 21.19 12.45 25.66 0.00 0.00 0.00 0.00 0.00 0.00 71 E13_Aa NovelBoundary 0 63.79 0.00 0.00 2.06 12.31 0.00 4.11 13.31 8.19 1.26 30.06 6.00 0.00 28.61 24.72 8.72 13.84 0.00 0.00 0.00 0.00 0.00 0.00 72 ER13a ExonRegion 0 203.84 1.65 8.57 48.48 128.55 75.44 75.36 108.80 162.67 61.03 439.86 49.77 260.27 614.26 458.34 178.44 430.61 0.00 0.00 0.00 0.00 5.09 4.69 73 E13a_E14a KnownJunction 0 335.17 0.00 11.44 62.73 154.33 93.98 72.96 165.32 176.91 62.13 487.39 30.31 206.32 547.89 515.48 150.73 464.33 0.00 0.00 0.00 0.00 0.00 0.00 74 ER14a ExonRegion 0 228.39 1.61 12.63 35.94 92.93 65.22 58.14 119.65 136.11 46.98 350.83 27.00 150.04 534.70 456.95 166.65 385.23 0.00 0.00 0.00 0.00 2.80 0.68 75 E14a_E15a KnownJunction 0 259.08 2.63 13.90 28.70 98.05 34.47 58.52 118.42 102.92 37.04 163.73 12.60 95.29 381.19 402.13 155.00 273.02 0.00 0.00 0.00 0.00 3.12 0.00 76 ER15a ExonRegion 0 252.65 0.71 14.72 28.79 91.62 54.25 51.02 114.68 114.11 35.04 286.33 20.58 107.72 450.26 414.34 138.78 266.82 0.00 0.00 0.00 0.00 0.75 2.02 77 E15a_E16b KnownJunction 0 357.17 3.09 27.44 52.41 139.64 86.48 72.69 150.74 127.14 44.46 336.03 41.11 94.15 475.60 490.27 173.12 342.40 0.00 0.00 0.00 0.00 0.00 0.00 78 ER16a ExonRegion 0 2.80 0.01 0.09 0.20 1.07 0.35 0.28 1.15 0.59 0.20 1.35 0.11 0.65 3.28 2.78 1.32 1.95 0.00 0.00 0.00 0.00 0.00 0.01 79 E16_Ab KnownBoundary 0 3.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 80 ER16b ExonRegion 0 302.54 4.34 21.43 49.86 127.39 68.69 57.11 138.04 148.20 56.11 352.60 20.32 104.69 520.13 481.34 147.41 315.63 0.00 0.00 0.00 0.00 0.53 4.83 81 E16a_E17a KnownJunction 0 406.37 2.70 19.40 72.25 166.30 113.51 90.84 196.38 179.16 63.77 395.52 29.11 112.33 440.58 523.03 142.61 389.53 0.00 0.00 0.00 0.00 0.00 7.94 82 ER17a ExonRegion 0 203.57 0.75 12.37 45.54 75.39 46.93 38.58 131.87 127.14 48.02 242.83 17.21 71.14 293.21 325.24 112.25 251.40 0.00 0.00 0.00 0.00 0.92 1.25 83 E17a_E18a KnownJunction 0 1045.37 0.00 19.75 130.29 277.25 102.27 98.39 289.94 241.29 86.93 527.08 75.92 306.31 728.42 731.57 320.43 561.20 0.00 0.00 0.00 0.00 5.45 0.00 84 E18_Aa NovelBoundary 0 62.01 0.00 0.00 3.93 0.00 0.00 0.00 6.33 2.40 0.00 4.69 5.40 0.00 4.94 4.45 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 85 ER18a ExonRegion 0 395.03 3.05 12.07 45.63 98.59 53.16 56.00 105.26 101.73 37.66 129.78 16.83 75.85 176.43 154.18 80.61 155.18 0.00 0.00 0.00 0.00 0.60 0.00 86 E18_Da KnownBoundary 0 294.35 2.43 2.78 13.42 97.54 28.62 40.06 58.94 62.44 28.55 61.91 17.56 50.81 9.83 26.82 16.24 64.05 0.00 0.00 0.00 0.00 0.00 0.00 87 ER18b ExonRegion 0 158.22 0.58 2.32 12.33 19.85 8.53 16.61 21.16 21.51 7.56 29.06 2.17 20.15 35.82 32.63 16.07 31.42 0.00 0.00 0.00 0.00 0.56 0.00 88 ER18c ExonRegion 1 21.87 0.00 0.00 1.36 14.27 0.61 2.65 2.30 1.24 0.00 7.73 0.00 28.14 10.83 10.64 1.98 3.30 0.00 0.00 0.00 0.00 0.00 0.00