Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CBR1 Gene 0 81.54 49.11 108.03 41.69 51.31 97.11 42.70 57.68 51.38 63.28 43.84 30.08 38.75 197.29 202.37 48.28 87.31 106.04 78.11 76.09 140.61 209.28 144.46 2 290349 Transcript 0 119.93 42.16 117.44 43.70 71.43 81.17 41.13 53.96 57.19 77.70 45.83 26.19 39.41 250.39 231.56 57.91 101.60 111.57 103.60 67.99 152.17 242.12 175.77 3 439427 Transcript 0 4.28 16.88 9.22 4.59 2.73 14.18 6.38 5.24 8.64 3.04 1.18 0.00 1.46 5.67 4.49 1.21 0.67 6.44 1.92 8.21 0.45 2.94 1.80 4 466328 Transcript 0 14.24 12.23 11.57 5.81 7.17 13.25 8.97 13.89 9.82 8.86 1.91 1.96 14.24 9.42 4.80 2.12 3.69 22.06 5.61 24.01 0.76 8.53 2.59 5 399191 Transcript 0 11.56 21.45 21.45 15.42 10.10 35.92 9.26 16.56 9.47 8.88 1.72 2.54 3.06 4.62 3.43 1.30 3.48 14.18 13.02 15.91 0.73 3.25 2.72 6 ER1a ExonRegion 0 2.75 0.00 1.33 0.03 1.48 2.42 0.62 0.00 0.00 0.59 1.11 0.00 0.00 3.21 3.27 2.02 0.00 0.24 1.90 0.54 3.38 2.66 1.56 7 E1_Ab KnownBoundary 0 7.33 0.00 1.83 0.00 4.33 7.38 1.77 0.00 0.00 1.40 2.37 0.00 0.00 13.71 13.35 3.85 0.00 0.00 4.42 0.00 5.62 6.00 4.35 8 E1_Ac KnownBoundary 1 36.01 16.51 10.47 1.86 24.96 60.48 21.42 0.00 0.00 5.78 15.37 5.55 6.49 66.93 172.45 46.23 40.02 31.79 56.57 30.55 54.67 23.70 108.33 9 ER1b ExonRegion 1 19.96 9.66 6.43 3.21 17.97 34.19 13.52 2.41 3.71 8.11 16.36 0.00 0.00 43.68 106.10 31.84 24.17 32.27 34.02 16.03 41.71 17.04 49.71 10 E1_Ad KnownBoundary 0 46.53 9.80 9.85 9.19 12.65 108.97 38.51 17.70 13.05 16.71 28.06 0.00 0.00 65.63 83.69 27.26 34.97 70.47 18.54 20.84 84.14 20.88 62.66 11 ER1c ExonRegion 1 41.27 18.20 9.25 6.20 30.50 104.53 37.20 9.77 6.67 13.19 31.02 0.00 0.00 92.66 154.35 41.31 46.87 53.95 44.91 33.51 90.24 28.54 98.67 12 ER1d ExonRegion 0 33.46 20.73 77.92 20.84 23.48 108.93 36.45 36.85 34.03 45.83 43.24 7.79 14.07 168.06 192.69 37.68 86.66 106.78 62.64 58.57 175.44 121.53 136.35 13 E1_Da NovelBoundary 0 3.78 20.13 16.00 1.30 0.00 2.33 2.25 7.11 4.22 4.54 0.00 0.00 0.00 4.59 0.00 4.27 4.11 2.28 21.27 13.55 2.59 11.21 0.00 14 E1a_E2a KnownJunction 1 61.79 80.71 193.72 40.32 55.35 494.94 184.56 94.80 92.77 102.56 140.40 31.36 70.13 398.20 396.07 83.82 263.30 188.24 165.56 116.01 402.29 360.60 266.08 15 E2_Aa NovelBoundary 0 23.34 20.26 17.53 3.73 21.82 58.77 24.95 17.13 8.07 12.11 2.32 6.30 13.64 2.59 9.64 4.02 3.93 9.66 25.51 5.69 3.09 5.39 3.24 16 ER2a ExonRegion 0 167.71 73.00 177.28 70.39 74.35 169.56 87.81 105.45 112.86 109.04 98.92 50.27 96.62 457.75 349.14 110.90 172.93 221.17 127.95 134.93 281.48 333.92 266.61 17 E2_Da KnownBoundary 0 13.63 15.39 26.67 9.16 7.81 9.26 16.08 27.68 12.15 12.76 2.63 6.60 19.80 19.66 9.77 3.42 3.74 40.29 23.62 32.98 3.15 8.51 6.66 18 E2a_E3a KnownJunction 0 0.00 9.01 1.83 2.00 0.00 0.00 2.25 2.46 5.03 1.40 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2a_E4a KnownJunction 0 0.00 0.00 1.69 4.59 0.00 17.04 0.00 4.35 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 4.05 0.00 0.00 0.00 0.00 20 E2a_E4b KnownJunction 0 219.15 51.18 172.67 61.10 119.27 114.82 59.13 66.01 89.44 125.12 70.54 17.86 45.78 433.28 352.80 93.05 168.40 175.10 177.61 86.10 253.97 312.96 293.05 21 ER2b ExonRegion 0 14.24 12.23 11.57 5.81 7.17 13.25 8.97 13.89 9.82 8.86 1.91 1.96 14.24 9.42 4.80 2.12 3.69 22.06 5.61 24.01 0.76 8.53 2.59 22 E2_Db NovelBoundary 0 20.52 29.07 15.85 6.63 4.33 15.56 8.30 12.20 20.63 7.28 9.53 12.30 14.93 22.31 10.26 12.22 7.67 30.39 15.06 42.44 0.00 5.14 8.54 23 Ix Intron 0 9.78 26.04 18.54 7.85 15.61 32.24 13.64 18.15 13.39 12.69 3.37 7.14 19.61 11.24 6.18 5.86 6.50 34.03 16.90 34.83 2.84 10.58 6.23 24 Ix_AR1 ActiveIntronRegion 0 9.81 26.12 18.60 7.87 15.66 32.33 13.69 18.21 13.43 12.73 3.38 7.16 19.67 11.27 6.20 5.88 6.52 34.13 16.95 34.93 2.84 10.60 6.25 25 E3_Aa NovelBoundary 0 13.34 19.80 20.73 13.32 25.30 35.04 34.89 8.38 5.90 4.32 0.00 0.00 6.82 9.89 10.26 0.00 0.00 20.02 0.00 37.84 0.00 12.19 3.16 26 ER3a ExonRegion 0 8.57 24.74 16.61 7.19 5.46 28.36 10.52 8.01 12.24 4.68 2.37 0.00 2.93 8.86 8.98 2.43 1.35 12.88 3.85 16.43 0.90 5.88 3.59 27 E3_Da NovelBoundary 0 10.45 26.31 38.79 6.59 16.64 37.99 22.17 23.12 16.84 3.25 2.68 0.00 0.00 11.89 4.45 0.00 13.37 32.87 11.86 34.39 2.47 5.02 4.01 28 Ix Intron 0 7.84 23.49 31.44 11.51 16.92 35.57 19.62 21.89 12.44 9.31 5.06 3.89 3.37 10.56 7.25 2.59 3.60 15.82 13.88 23.19 0.48 5.00 3.84 29 Ix_AR1 ActiveIntronRegion 0 7.91 23.68 31.71 11.60 17.07 35.88 19.78 22.08 12.54 9.39 5.10 3.92 3.40 10.65 7.32 2.61 3.63 15.95 14.00 23.39 0.48 5.04 3.87 30 E4_Aa NovelBoundary 0 16.67 54.00 48.96 20.14 27.76 53.26 14.18 15.81 18.92 16.41 4.84 6.30 0.00 3.00 14.09 0.00 9.54 30.14 4.80 26.65 0.00 5.02 7.68 31 ER4a ExonRegion 0 23.13 42.89 41.22 26.25 20.20 54.81 18.53 28.78 17.39 17.77 3.44 5.07 6.12 9.24 6.87 2.60 6.96 26.58 21.99 31.83 1.47 6.49 5.43 32 E4_Ab KnownBoundary 0 22.45 44.14 63.92 25.47 19.35 77.85 23.36 32.00 7.00 17.54 2.16 6.00 6.82 7.77 9.77 0.00 8.32 23.92 13.18 32.92 2.53 5.69 3.59 33 ER4b ExonRegion 0 193.11 85.62 185.68 64.37 81.96 127.10 49.09 73.19 81.29 102.27 79.80 58.47 46.31 364.34 301.86 80.04 159.58 129.02 110.68 122.25 281.85 298.42 278.88 34 E4_Da KnownBoundary 0 204.33 122.22 164.48 51.38 102.46 110.05 57.15 98.99 89.64 118.68 93.08 105.48 87.33 420.69 351.94 75.28 166.90 140.07 108.52 135.31 262.99 293.06 318.75 35 ER4c ExonRegion 0 137.90 75.32 178.30 69.98 93.55 126.26 63.63 95.87 82.14 107.40 65.83 60.70 72.45 314.69 338.59 78.66 136.42 159.37 131.30 117.32 199.16 410.74 232.71