Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SIK1 Gene 0 47.08 12.27 73.97 41.36 35.95 15.14 13.59 82.51 180.88 37.71 14.32 22.04 9.39 84.15 40.80 35.68 48.58 6.64 26.57 4.91 18.28 176.31 87.33 2 270162 Transcript 0 22.57 8.53 52.45 32.62 17.64 14.72 10.78 67.23 173.04 37.47 15.89 23.00 8.27 83.32 45.09 38.15 53.52 8.39 28.64 5.73 16.21 184.00 81.40 3 478426 Transcript 0 20.72 0.55 17.26 3.69 11.91 0.20 3.90 13.16 40.37 8.03 2.10 3.56 2.89 6.56 7.39 4.81 7.73 0.05 2.17 1.67 5.89 6.58 8.69 4 IG44 Intergenic 0 0.99 0.42 4.66 4.58 3.16 2.67 2.22 11.30 22.95 18.32 0.01 0.43 0.38 1.48 1.43 0.33 0.02 1.54 2.29 0.81 0.19 0.18 0.16 5 IG44_SR8 SilentIntergenicRegion 0 0.63 0.42 13.45 3.56 1.32 3.22 2.37 7.90 18.41 20.48 0.00 0.00 0.00 0.06 0.00 0.00 0.00 2.02 3.69 0.95 0.22 0.21 0.00 6 IG44_AR8 ActiveIntergenicRegion 0 0.60 0.38 9.86 3.74 1.90 2.27 1.95 11.24 22.33 23.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.16 2.13 0.98 0.00 0.00 0.00 7 IG44_AR7 ActiveIntergenicRegion 0 0.58 0.00 7.07 6.18 3.12 2.00 4.35 7.02 22.98 22.54 0.00 0.00 0.00 0.21 0.00 0.00 0.00 1.41 2.20 0.57 0.00 0.38 0.73 8 IG44_SR6 SilentIntergenicRegion 0 0.53 0.68 10.19 6.45 3.13 3.89 3.63 14.83 26.37 25.05 0.05 0.00 0.00 0.07 0.17 0.00 0.00 3.01 5.05 2.13 0.68 0.37 0.66 9 IG44_AR6 ActiveIntergenicRegion 0 0.82 3.62 16.54 17.18 10.17 8.61 8.42 26.68 46.83 45.59 0.00 0.00 0.00 0.40 0.20 0.00 0.00 5.60 5.63 2.03 0.21 0.34 0.00 10 IG44_SR5 SilentIntergenicRegion 0 1.87 0.13 1.52 2.31 2.07 1.28 1.60 7.68 16.08 11.77 0.00 0.71 0.31 2.49 2.46 0.43 0.00 0.58 1.58 0.27 0.00 0.11 0.05 11 IG44_AR5 ActiveIntergenicRegion 0 3.00 0.96 2.36 5.94 8.79 6.31 2.85 26.65 51.26 39.45 0.00 1.97 0.73 6.43 3.65 1.13 0.00 0.69 2.77 0.60 0.00 0.00 0.00 12 IG44_SR4 SilentIntergenicRegion 0 1.33 0.29 2.04 5.35 4.86 3.78 1.48 17.85 34.65 22.51 0.00 0.62 1.63 3.70 4.10 1.00 0.00 1.35 1.46 0.85 0.09 0.04 0.06 13 IG44_AR4 ActiveIntergenicRegion 0 0.21 0.42 1.86 4.89 1.40 1.64 1.71 13.93 31.12 15.50 0.00 0.00 0.00 0.26 0.60 0.00 0.00 2.15 2.62 0.51 0.00 0.00 0.00 14 IG44_SR3 SilentIntergenicRegion 0 0.62 0.41 0.40 8.51 7.18 1.60 2.90 8.99 26.37 16.69 0.00 0.00 0.00 0.13 0.00 0.58 0.64 0.27 1.41 0.53 0.19 0.40 0.00 15 ER1a ExonRegion 0 16.04 3.49 2.78 2.23 0.61 0.00 4.05 2.47 5.75 1.42 1.77 0.00 1.69 10.20 15.31 6.37 8.04 0.00 1.37 0.91 2.65 17.05 20.73 16 E1a_E2a KnownJunction 0 3.19 0.00 2.84 2.03 4.33 0.00 0.00 4.52 3.01 4.78 2.00 0.00 13.64 0.00 4.70 0.00 4.39 0.00 0.00 0.00 6.30 8.33 4.35 17 ER2a ExonRegion 0 13.12 7.06 23.72 19.53 11.06 7.85 4.56 34.01 85.67 20.21 6.62 3.95 6.73 40.05 35.21 30.68 29.84 5.29 24.28 4.00 8.78 113.17 74.69 18 E2a_E3a KnownJunction 0 20.45 17.30 24.36 30.67 15.37 32.42 9.01 49.21 151.07 45.02 19.53 17.56 20.45 60.57 33.25 35.72 31.23 9.66 8.75 6.01 11.06 203.54 85.53 19 I2_AR1 ActiveIntronRegion 0 4.80 0.00 10.95 3.27 2.68 0.00 3.80 19.36 45.37 6.73 0.00 8.66 0.00 3.25 2.51 4.16 6.82 3.20 7.64 0.00 0.00 5.97 8.81 20 I2_SR2 SilentIntronRegion 0 7.41 0.00 11.03 4.09 2.68 0.00 6.62 22.25 48.02 4.59 0.00 10.82 0.00 2.23 0.00 5.94 13.20 3.70 9.56 0.00 0.00 5.73 10.65 21 I2_AR2 ActiveIntronRegion 0 10.24 1.52 8.33 2.84 5.13 0.34 2.32 16.56 36.31 5.04 1.08 5.66 0.00 1.60 0.83 1.08 4.63 0.47 1.51 0.40 1.24 2.69 4.12 22 E3_Aa NovelBoundary 0 13.19 0.00 8.63 2.03 7.13 2.67 8.52 23.49 62.50 5.67 2.42 12.60 0.00 2.12 0.00 0.00 3.74 0.00 9.22 0.00 5.25 6.06 4.35 23 ER3a ExonRegion 0 37.79 23.48 59.12 49.73 39.82 19.73 21.91 82.58 240.32 55.99 20.37 49.10 22.33 81.46 47.29 45.98 71.01 7.08 37.41 7.78 9.30 279.67 108.40 24 E3_Da NovelBoundary 0 46.38 5.66 19.93 1.66 12.99 0.00 4.20 28.14 60.97 5.02 0.00 6.15 0.00 0.00 0.00 11.02 12.53 0.00 13.18 0.00 2.78 10.84 15.79 25 E3a_E4a KnownJunction 0 32.23 24.01 50.29 58.57 30.48 23.85 13.87 73.69 217.30 47.87 19.00 56.42 6.82 105.25 71.70 35.72 61.80 9.08 43.77 8.44 11.55 347.50 120.02 26 I3 Intron 0 20.66 2.04 21.66 6.99 15.42 0.86 7.45 29.40 70.27 8.59 1.21 7.50 4.15 3.88 7.27 4.91 11.36 1.48 8.75 0.81 3.89 12.75 16.27 27 I3_AR1 ActiveIntronRegion 1 9.18 4.58 12.15 4.20 4.13 3.44 4.91 24.25 57.30 4.86 0.00 17.54 2.45 3.06 6.57 5.97 11.58 0.00 6.37 0.80 0.83 10.86 6.87 28 I3_AR2 ActiveIntronRegion 0 18.06 0.00 24.59 2.82 7.85 0.00 4.68 32.38 87.45 12.00 0.00 5.48 2.50 3.46 9.28 11.89 17.60 0.00 9.34 0.00 0.00 17.36 20.56 29 I3_SR1 SilentIntronRegion 0 22.24 2.00 23.71 7.49 17.04 0.62 8.42 32.65 81.61 11.04 1.51 8.62 4.98 3.88 7.47 4.44 12.92 1.43 9.45 0.65 4.10 13.26 18.42 30 I3_AR3 ActiveIntronRegion 0 19.32 1.64 22.02 6.54 23.69 1.97 10.31 31.79 52.36 5.96 0.00 3.83 2.10 5.72 8.70 7.98 8.86 0.50 6.84 0.57 4.14 10.61 14.98 31 I3_AR5 ActiveIntronRegion 0 4.94 0.51 8.71 3.94 3.57 0.00 0.44 6.19 26.55 0.13 0.00 0.00 2.87 4.92 5.48 3.47 2.11 6.57 4.25 0.00 5.63 7.76 20.39 32 I3_SR2 SilentIntronRegion 0 22.93 1.76 20.65 6.91 10.65 0.56 4.82 20.60 45.17 2.67 0.94 2.57 2.87 2.83 7.18 4.94 8.01 2.58 8.70 1.35 3.61 12.32 12.87 33 E4_Aa NovelBoundary 0 24.67 0.00 32.32 3.36 19.69 0.00 5.96 35.73 71.76 5.72 2.21 0.00 6.01 4.71 15.33 14.27 8.60 2.45 13.93 0.00 3.15 8.21 8.19 34 ER4a ExonRegion 0 40.79 20.15 50.43 46.87 35.76 14.39 20.70 78.51 252.34 52.76 33.62 81.47 14.64 94.20 52.05 46.20 62.62 9.07 48.94 8.58 21.24 355.71 131.97 35 E4_Ab KnownBoundary 0 99.13 35.19 78.09 47.38 56.11 17.38 43.01 102.27 319.38 65.25 42.75 112.84 12.66 107.48 54.76 71.95 91.72 10.57 55.15 8.25 37.56 396.18 153.65 36 E4_Da KnownBoundary 0 34.60 0.00 17.24 5.69 29.37 0.00 4.15 13.60 53.47 7.58 2.68 5.85 13.64 2.12 10.26 0.00 17.39 0.00 0.00 3.20 2.78 9.00 20.06 37 E4a_E4c KnownJunction 1 115.65 26.05 66.94 53.87 49.58 30.83 34.67 131.48 325.55 67.91 31.59 102.78 20.45 132.50 62.18 59.56 122.39 9.41 60.80 5.94 20.82 378.79 132.06 38 ER4b ExonRegion 1 84.80 25.58 61.31 46.91 61.71 22.77 37.97 109.73 301.89 65.82 42.96 117.45 20.88 119.82 49.98 71.52 105.20 11.21 55.38 9.06 34.12 392.64 146.93 39 ER4c ExonRegion 0 20.72 0.55 17.26 3.69 11.91 0.20 3.90 13.16 40.37 8.03 2.10 3.56 2.89 6.56 7.39 4.81 7.73 0.05 2.17 1.67 5.89 6.58 8.69 40 E4_Ac KnownBoundary 0 30.30 3.29 36.90 4.73 17.32 0.00 0.00 8.91 34.66 7.01 2.00 0.00 0.00 7.00 4.45 0.00 8.42 0.00 0.00 0.00 13.78 8.39 15.96 41 ER4d ExonRegion 0 38.96 13.58 70.81 38.20 26.44 21.49 17.75 115.86 278.84 52.03 26.42 70.02 32.54 121.47 49.59 55.64 82.32 11.64 54.29 10.27 28.69 280.74 129.87 42 E4_Db NovelBoundary 0 21.49 0.00 13.01 7.79 15.96 0.00 10.16 17.29 57.84 10.42 0.00 0.00 13.64 10.24 9.89 14.61 4.11 0.00 3.86 0.00 11.37 13.84 28.00 43 E4b_E5a KnownJunction 0 7.41 27.56 57.01 13.12 31.58 15.39 18.68 122.56 245.11 53.05 42.12 81.33 20.78 111.60 59.46 48.36 93.13 7.96 42.35 12.02 23.04 270.59 112.51 44 ER5a ExonRegion 0 26.04 10.17 49.42 18.94 26.59 10.97 17.43 89.49 208.45 43.13 24.91 48.97 15.08 135.06 61.09 55.23 86.96 13.66 38.56 8.85 23.04 219.24 120.57 45 E5_Da NovelBoundary 0 14.82 0.00 25.52 5.13 12.22 0.00 2.25 8.71 50.61 5.02 2.05 5.85 0.00 2.47 4.45 11.88 4.21 0.00 0.00 0.00 6.30 17.88 23.90 46 E5a_E6a KnownJunction 0 29.26 3.35 77.29 32.66 11.97 5.22 9.45 100.63 238.25 55.66 39.64 69.92 20.29 84.41 41.41 42.81 89.11 18.53 77.18 0.00 11.18 183.58 129.07 47 E6_Aa NovelBoundary 0 7.33 0.00 12.57 1.70 3.57 0.00 0.00 20.09 43.84 5.59 0.00 0.00 0.00 2.47 0.00 0.00 17.77 0.00 4.52 0.00 8.40 8.76 11.87 48 ER6a ExonRegion 0 20.49 10.54 73.86 26.27 20.55 9.17 11.86 90.59 223.95 51.30 37.16 43.49 27.71 96.86 42.20 36.34 84.62 13.69 60.52 2.71 29.15 207.31 123.61 49 ER6b ExonRegion 0 19.42 7.52 63.61 21.63 8.45 15.35 9.76 73.21 173.22 49.04 15.77 11.04 14.58 112.22 47.81 36.22 58.90 7.75 36.88 7.84 25.04 159.08 95.01 50 E6_Db NovelBoundary 0 3.04 0.00 10.59 3.13 3.48 0.00 2.25 16.59 33.30 1.16 2.00 0.00 0.00 2.35 0.00 8.29 9.16 4.27 0.00 0.00 16.68 10.90 7.85 51 E6b_E7a KnownJunction 1 6.37 5.13 78.32 23.61 15.79 29.98 22.92 79.64 207.14 55.12 21.48 25.96 13.31 118.25 23.61 59.98 42.92 13.35 34.54 9.14 12.05 152.53 67.18 52 E7_Aa NovelBoundary 0 0.00 0.00 12.36 1.73 0.00 0.00 0.00 2.01 20.43 2.58 0.00 6.30 0.00 0.00 5.93 0.00 0.00 4.19 0.00 0.00 10.50 2.69 8.37 53 ER7a ExonRegion 0 23.40 4.63 57.28 28.10 13.81 17.54 9.86 59.82 179.10 41.98 16.06 15.46 9.88 86.06 51.26 42.25 46.79 12.49 31.98 5.78 17.64 172.43 86.55 54 E7_Da NovelBoundary 0 3.41 0.00 13.69 0.00 0.00 2.50 0.00 14.33 45.25 10.26 2.37 12.45 0.00 0.00 0.00 0.00 4.77 1.53 9.60 3.00 8.34 5.27 7.43 55 E7a_E8a KnownJunction 0 10.45 0.00 55.29 53.51 8.06 10.16 10.25 80.67 211.28 40.88 16.69 11.55 0.00 67.22 51.55 51.95 83.12 14.05 31.81 2.88 27.61 248.67 58.22 56 E7a_E9a NovelJunction 0 0.00 0.00 14.31 0.00 0.00 0.00 0.00 9.41 31.34 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.76 0.00 57 I7 Intron 0 4.26 0.00 8.58 0.45 4.19 0.00 0.89 14.40 34.17 8.03 1.30 0.00 0.00 3.31 4.31 1.33 10.34 1.03 3.56 0.48 10.35 5.13 11.17 58 I7_SR1 SilentIntronRegion 0 4.30 0.00 8.65 0.46 4.23 0.00 0.90 14.53 34.47 8.10 1.31 0.00 0.00 3.33 4.35 1.34 10.43 1.04 3.59 0.48 10.43 5.17 11.27 59 E8_Aa NovelBoundary 0 0.00 0.00 20.40 0.00 4.33 0.00 5.61 1.97 68.43 2.50 2.68 0.00 0.00 2.88 6.30 7.09 0.00 1.95 13.84 0.00 3.15 8.21 12.38 60 ER8a ExonRegion 0 17.39 3.58 52.83 36.96 9.32 10.17 5.76 67.52 175.29 39.81 16.96 14.37 6.86 81.91 46.30 41.12 73.52 9.44 16.14 4.95 24.41 204.09 78.83 61 E8_Da NovelBoundary 0 9.56 0.00 22.53 1.50 8.32 0.00 6.01 24.44 64.64 5.26 5.05 0.00 0.00 5.42 13.97 11.79 7.95 2.57 0.00 0.00 14.27 14.88 20.83 62 E8a_E9a KnownJunction 0 17.56 6.18 56.12 41.55 12.05 21.86 14.84 82.11 158.59 38.17 27.85 18.46 0.00 112.72 71.08 48.19 77.42 6.38 21.55 9.78 16.80 214.38 80.67 63 I8 Intron 0 6.25 0.00 15.44 1.90 1.44 0.98 1.42 11.75 40.26 4.36 3.37 1.64 0.00 7.99 6.39 8.78 12.85 2.59 6.41 0.57 12.72 13.99 13.40 64 I8_SR1 SilentIntronRegion 0 6.28 0.00 15.52 1.91 1.44 0.99 1.43 11.82 40.47 4.38 3.39 1.65 0.00 8.03 6.42 8.83 12.91 2.60 6.45 0.57 12.79 14.06 13.47 65 E9_Aa NovelBoundary 0 17.78 0.00 26.37 0.00 4.07 2.21 0.00 24.32 66.84 4.57 0.00 16.66 6.82 12.18 4.45 12.90 8.23 4.39 18.45 2.36 22.55 15.19 53.10 66 ER9a ExonRegion 0 13.09 3.23 63.03 36.15 14.16 9.23 6.50 76.75 175.62 35.29 15.97 16.84 6.85 90.76 53.49 47.20 56.22 10.35 24.98 7.89 20.73 189.50 104.37 67 E9_Da NovelBoundary 0 2.96 0.00 5.97 3.63 0.00 0.00 0.00 8.09 53.10 6.45 0.00 0.00 0.00 2.24 10.63 0.00 8.23 2.57 3.86 0.00 6.12 10.35 8.71 68 E9a_E10a KnownJunction 0 0.00 3.03 81.96 33.63 20.20 13.17 9.94 101.12 220.69 47.49 7.58 23.26 6.82 136.09 77.38 54.00 59.09 17.41 34.35 9.40 9.20 250.69 138.72 69 ER10a ExonRegion 0 12.93 4.12 51.51 21.91 9.63 9.15 6.33 56.78 160.87 44.24 15.85 10.85 3.37 89.46 37.02 29.32 50.24 11.50 33.66 3.35 19.57 132.11 79.63 70 E10_Da NovelBoundary 0 14.74 0.00 20.40 0.00 3.57 0.00 0.00 18.48 66.55 5.61 2.21 0.00 0.00 10.18 5.56 0.00 4.11 0.00 4.24 0.00 11.00 5.57 16.39 71 E10a_E11a KnownJunction 0 13.63 9.01 51.42 29.07 7.22 16.30 10.16 59.68 170.17 35.14 18.37 12.60 0.00 79.93 52.91 37.51 59.84 9.82 35.39 5.88 9.08 146.53 76.49 72 I10 Intron 0 7.66 0.87 23.14 3.89 2.28 1.56 1.55 17.00 48.01 10.92 2.88 1.46 0.82 9.35 9.72 7.91 13.71 2.74 5.77 0.68 16.19 13.75 18.45 73 I10_SR1 SilentIntronRegion 0 7.69 0.87 23.23 3.91 2.29 1.57 1.56 17.07 48.20 10.96 2.89 1.47 0.83 9.38 9.76 7.94 13.76 2.75 5.79 0.68 16.25 13.81 18.52 74 E11_Aa NovelBoundary 0 37.86 3.35 33.62 3.63 7.89 0.00 0.00 37.13 89.70 5.29 4.74 0.00 0.00 11.65 4.45 4.27 4.49 0.00 4.52 0.00 10.69 14.21 20.06 75 ER11a ExonRegion 0 8.38 2.63 52.56 24.44 12.21 8.69 5.91 63.81 158.49 26.60 14.89 13.50 4.26 84.94 34.91 28.05 53.41 7.08 26.30 3.37 21.08 113.14 65.95 76 E11_Da NovelBoundary 0 17.41 2.96 4.73 1.50 0.00 0.00 1.94 2.55 27.00 5.35 2.47 0.00 0.00 10.18 0.00 4.02 9.54 1.70 12.99 0.00 6.18 11.76 15.96 77 E11a_E12a KnownJunction 0 12.74 2.83 73.09 24.24 21.39 15.33 1.68 67.16 175.84 15.55 6.84 0.00 0.00 105.19 55.26 37.77 45.63 5.06 32.75 9.27 18.04 104.53 40.21 78 I11 Intron 0 2.89 0.43 8.06 1.49 1.41 0.58 2.23 4.60 20.52 5.57 1.63 1.12 0.00 4.58 3.12 4.38 5.90 0.97 4.35 0.22 8.34 7.45 12.98 79 I11_SR1 SilentIntronRegion 0 3.80 0.00 9.28 1.66 1.64 0.75 2.29 3.89 19.43 4.54 1.97 0.76 0.00 4.66 3.44 4.08 6.96 0.94 4.54 0.00 8.42 8.59 9.76 80 I11_AR2 ActiveIntronRegion 0 1.99 0.96 6.73 1.43 1.26 0.43 2.20 5.42 21.98 6.98 1.31 1.00 0.00 4.54 2.81 4.20 4.70 1.08 4.49 0.50 8.53 6.19 16.62 81 E12_Aa NovelBoundary 0 10.37 0.00 15.58 1.73 0.00 4.60 0.00 9.49 29.05 6.69 0.00 0.00 0.00 4.94 4.45 0.00 4.77 0.00 0.00 0.00 7.29 0.00 18.18 82 ER12a ExonRegion 0 9.56 2.17 43.42 21.56 8.11 8.21 2.94 49.60 130.38 28.06 8.26 9.33 8.77 73.67 32.68 25.99 42.16 4.40 17.00 2.54 21.60 110.76 55.88 83 E12_Da NovelBoundary 0 0.00 0.00 7.72 2.06 0.00 0.00 0.00 4.81 26.71 1.67 0.00 0.00 0.00 2.47 0.00 3.42 0.00 0.00 0.00 0.00 11.61 4.96 0.00 84 E12a_E13a KnownJunction 0 3.78 3.09 48.19 34.83 3.99 5.22 4.50 70.24 200.84 27.83 14.53 11.85 0.00 64.39 37.95 40.67 44.13 8.83 30.21 3.26 20.02 133.67 71.79 85 E13_Aa NovelBoundary 0 0.00 0.00 13.69 5.76 0.00 0.00 0.00 12.12 16.96 3.30 0.00 0.00 0.00 4.65 9.27 0.00 13.84 4.39 20.80 0.00 5.44 8.45 12.72 86 ER13a ExonRegion 0 71.10 17.47 97.30 55.63 54.29 19.05 17.72 101.80 201.40 40.61 13.83 22.59 8.84 89.29 42.08 36.98 46.20 5.53 25.90 4.81 18.28 196.02 94.92 87 IG43_AR5 ActiveIntergenicRegion 0 2.49 0.00 0.00 0.00 2.68 0.00 0.00 0.00 3.48 0.00 0.00 0.00 0.00 4.35 1.87 0.00 14.15 0.00 0.00 0.00 0.00 0.00 0.00