Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RWDD2B Gene 0 51.78 46.12 23.03 25.13 35.61 36.11 27.73 35.09 34.80 37.99 45.93 68.68 70.33 70.77 70.96 62.68 61.09 32.69 58.94 49.15 29.50 31.96 29.99 2 493196 Transcript 0 7.29 6.75 3.61 3.84 7.73 3.04 5.08 6.94 7.30 4.73 3.86 9.42 6.49 4.19 8.02 5.86 4.38 3.80 4.42 7.42 2.14 2.63 4.42 3 471269 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 5.42 6.30 3.85 4.39 0.00 8.47 0.00 0.00 0.00 0.00 4 472184 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 286777 Transcript 0 6.22 57.62 7.95 30.90 20.20 49.18 61.03 4.39 22.68 17.35 36.75 5.85 6.82 21.01 17.80 28.20 19.92 27.82 47.15 38.54 10.13 11.08 11.69 6 486719 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 481411 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 466746 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 IG14_AR2 ActiveIntergenicRegion 0 0.00 1.50 0.82 0.00 0.15 0.00 0.00 0.00 0.00 1.05 2.28 15.15 0.00 0.09 2.14 2.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 IG14_AR1 ActiveIntergenicRegion 0 3.36 2.49 0.32 5.39 3.26 1.30 1.88 3.19 1.30 3.31 2.38 20.28 0.00 4.60 2.09 1.58 1.17 0.98 0.56 2.26 0.00 0.00 0.00 11 ER1a ExonRegion 0 0.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Af KnownBoundary 0 3.70 0.00 0.00 1.73 0.00 7.95 0.00 4.39 0.00 0.00 0.00 0.00 13.64 4.59 0.00 0.00 0.00 0.00 3.95 2.30 0.00 0.00 3.33 13 ER1b ExonRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1c ExonRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.67 0.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1d ExonRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.04 1.62 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 16 ER1e ExonRegion 0 2.75 3.05 1.23 1.64 0.00 8.80 2.65 1.21 3.83 4.59 1.55 0.00 9.38 6.82 11.02 0.89 3.63 0.00 5.10 15.74 0.66 0.63 3.52 17 ER1f ExonRegion 1 48.31 41.63 11.14 15.39 23.92 79.82 31.35 18.45 17.91 32.25 42.81 5.09 16.42 72.80 90.79 60.23 58.06 17.12 46.75 121.71 32.86 24.94 29.37 18 E1_Ag KnownBoundary 1 140.25 101.56 24.10 29.40 83.36 167.06 84.62 35.65 32.09 52.35 100.34 13.95 18.99 123.79 106.19 131.76 136.33 32.21 100.24 229.08 81.18 62.70 59.16 19 ER1g ExonRegion 1 95.00 62.16 19.62 24.36 48.11 89.91 52.62 33.00 38.39 59.02 75.06 16.73 25.87 75.97 70.88 122.11 105.66 81.01 78.63 73.01 63.35 26.01 36.85 20 E1a_E2a KnownJunction 0 0.00 2.70 1.12 4.10 0.00 0.00 0.00 0.00 0.00 3.09 0.00 0.00 0.00 2.47 0.00 0.00 16.74 2.16 0.00 0.00 2.47 0.00 0.00 21 E1a_E3a KnownJunction 0 19.48 23.61 10.44 6.03 0.00 5.79 1.68 14.79 26.33 16.01 59.86 19.66 19.48 30.90 14.34 14.53 49.84 26.90 4.33 35.47 66.16 24.86 0.00 22 ER2a ExonRegion 1 20.04 32.20 13.22 13.67 25.10 38.23 31.49 13.46 9.84 10.25 7.18 19.35 11.87 9.20 48.75 36.57 43.81 21.25 43.05 40.91 32.92 12.85 49.83 23 E2_Da KnownBoundary 1 1846.18 1538.87 1760.02 2007.27 1375.64 1012.88 1546.09 1678.45 1644.60 1363.08 487.33 189.66 299.17 226.44 632.67 1719.81 900.79 2526.04 1558.92 1651.11 724.71 913.11 2025.92 24 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 5.42 6.30 3.85 4.39 0.00 8.47 0.00 0.00 0.00 0.00 25 ER2b ExonRegion 0 7.74 10.17 16.35 14.35 12.63 5.44 21.02 12.37 7.41 11.86 6.22 18.26 2.49 14.06 7.25 43.28 18.46 18.82 49.57 15.56 4.34 11.72 37.90 26 E2_Db NovelBoundary 1 1668.59 1842.76 3472.67 4013.38 2022.41 1107.20 2209.64 4163.14 3717.15 3023.37 701.28 240.68 440.07 318.97 867.55 1973.50 1243.38 4295.57 1575.57 2099.49 960.64 955.79 1740.47 27 E2b_E3a KnownJunction 0 0.00 0.00 7.33 7.96 11.38 2.16 4.50 1.97 0.00 6.21 0.00 19.21 6.01 14.54 10.26 46.06 12.44 15.30 51.77 0.00 0.00 11.70 12.04 28 ER3a ExonRegion 0 26.91 58.11 32.73 41.91 60.85 75.55 42.52 44.06 62.52 71.44 110.19 83.04 93.39 127.55 125.06 132.95 131.67 89.33 93.29 117.39 71.09 68.50 53.23 29 E3_Da KnownBoundary 0 7.11 19.34 4.29 17.41 12.48 40.09 42.09 13.60 22.89 26.35 7.16 18.46 32.79 40.91 14.09 15.55 34.41 12.64 26.45 52.54 8.83 20.76 11.95 30 E3a_E3b KnownJunction 0 45.71 63.48 35.98 30.53 68.85 141.06 77.68 40.13 56.22 44.16 82.97 120.19 82.79 99.89 146.86 127.66 111.92 30.26 73.70 43.59 39.35 69.93 34.40 31 E3a_E3c KnownJunction 0 6.22 57.62 7.95 30.90 20.20 49.18 61.03 4.39 22.68 17.35 36.75 5.85 6.82 21.01 17.80 28.20 19.92 27.82 47.15 38.54 10.13 11.08 11.69 32 ER3b ExonRegion 0 32.13 18.95 11.72 20.86 18.40 19.13 19.27 18.78 20.31 28.23 16.19 31.00 16.57 20.25 19.35 17.56 23.56 18.12 25.16 40.21 6.94 21.05 9.08 33 E3_Ab KnownBoundary 0 54.45 22.63 15.26 22.18 31.49 20.22 16.16 18.40 25.09 31.19 11.58 36.91 13.31 24.49 19.66 12.30 24.87 16.66 30.87 39.88 6.05 13.96 0.00 34 ER3c ExonRegion 0 75.56 77.97 47.62 52.40 57.19 69.77 41.66 46.38 62.12 84.02 102.50 159.41 91.14 160.69 147.05 161.87 134.70 44.59 90.09 81.07 56.18 74.23 54.17 35 E3_Db KnownBoundary 0 9.93 18.68 1.18 12.42 0.00 8.97 14.71 7.23 9.32 3.81 6.58 24.16 6.33 12.30 9.64 7.26 7.57 5.80 4.80 18.60 9.14 6.25 4.35 36 E3b_E3c KnownJunction 1 80.53 88.87 75.37 61.90 47.71 55.25 11.13 35.78 57.23 101.35 115.87 158.90 52.59 204.13 179.37 115.18 124.45 43.86 87.81 105.72 67.15 68.95 44.13 37 ER3d ExonRegion 0 18.05 9.79 3.91 12.35 14.22 8.64 12.47 9.59 8.91 11.68 12.67 15.99 8.86 11.76 15.40 15.52 11.68 7.34 9.72 14.20 5.74 5.97 4.97 38 E3_Ac KnownBoundary 1 6.96 0.00 0.00 15.62 8.32 0.00 8.66 4.68 5.30 10.26 12.21 66.92 13.31 17.48 13.35 8.29 12.44 11.11 8.19 7.99 3.15 11.02 14.77 39 ER3e ExonRegion 0 100.44 123.91 71.65 73.32 68.93 48.58 62.63 70.05 85.58 109.48 164.13 203.56 131.72 244.11 164.93 189.36 171.59 90.73 185.67 147.46 75.34 99.73 72.27 40 E3_Dc KnownBoundary 0 115.80 105.64 68.95 50.74 89.05 59.00 73.13 83.50 87.24 89.72 148.46 211.72 166.39 223.32 174.55 207.89 209.16 84.44 213.94 144.64 95.01 97.06 59.67 41 ER3f ExonRegion 0 95.67 81.91 58.95 57.14 65.52 76.77 49.82 59.04 85.09 94.02 122.20 203.80 138.81 213.62 152.92 172.17 178.51 88.65 168.63 124.62 76.93 68.38 72.41 42 E3_Dd KnownBoundary 0 89.72 79.53 44.76 34.63 113.67 61.33 70.66 46.45 58.16 90.34 111.13 187.26 121.10 224.50 184.56 163.03 119.40 44.65 111.81 116.33 57.82 76.79 56.00 43 E3_De KnownBoundary 0 114.69 116.03 53.46 31.90 109.76 86.43 76.45 67.44 73.18 89.07 124.29 179.01 149.18 299.14 206.19 168.25 158.67 66.49 172.43 120.04 57.95 88.91 81.78 44 ER3g ExonRegion 0 101.06 98.63 63.97 44.46 122.08 79.92 76.18 80.16 82.75 116.70 144.24 188.51 128.98 276.44 178.31 189.47 145.10 60.82 181.43 127.30 66.48 95.58 81.61 45 ER3h ExonRegion 0 116.11 119.54 54.82 62.02 101.00 83.22 69.72 87.52 87.83 104.57 131.84 239.06 157.91 247.06 179.93 179.96 172.36 89.40 161.57 114.28 73.12 92.45 79.52 46 E3f_E4a KnownJunction 0 146.03 116.89 44.79 68.99 97.88 88.70 62.53 76.27 56.02 110.75 120.35 151.85 113.95 180.82 146.98 99.80 166.81 55.22 144.66 77.34 51.95 87.20 70.51 47 I3 Intron 0 9.71 2.80 2.65 4.19 7.57 2.66 3.95 2.36 1.97 6.01 6.21 16.40 8.10 7.48 7.45 7.95 8.83 2.61 2.44 6.83 0.84 2.87 3.59 48 I3_SR1 SilentIntronRegion 0 9.74 2.81 2.66 4.21 7.59 2.67 3.96 2.37 1.98 6.03 6.23 16.45 8.12 7.50 7.47 7.98 8.86 2.61 2.44 6.85 0.85 2.88 3.60 49 E4_Aa NovelBoundary 0 12.74 3.35 7.69 5.59 16.21 0.00 18.64 2.55 1.16 8.00 7.42 18.46 6.82 2.47 4.45 7.18 4.02 2.11 0.00 3.26 0.00 2.51 0.00 50 ER4a ExonRegion 0 101.58 78.53 34.46 36.22 46.90 54.58 38.07 59.68 45.47 51.22 59.26 103.11 151.55 101.41 116.40 78.59 83.73 36.86 92.14 55.33 40.95 48.84 40.64 51 E4_Da KnownBoundary 0 3.78 11.18 8.43 4.03 6.96 4.32 17.67 9.57 27.57 11.82 12.21 20.11 12.66 7.06 4.45 3.76 4.77 11.57 13.93 9.08 11.37 5.63 3.50 52 ER4b ExonRegion 0 14.03 13.49 7.22 7.69 15.47 6.07 10.17 13.88 14.61 9.47 7.72 18.84 12.98 8.38 16.04 11.72 8.76 7.59 8.84 14.84 4.28 5.27 8.84 53 IG13_AR1 ActiveIntergenicRegion 0 28.03 21.56 15.18 33.24 11.04 31.65 7.55 12.05 19.14 18.94 8.47 6.30 1.04 5.38 5.23 8.00 8.01 18.31 25.12 16.90 14.11 7.53 8.31 54 IG13_SR1 SilentIntergenicRegion 0 14.57 13.16 6.77 17.27 16.70 35.97 9.11 6.11 10.00 8.59 4.71 6.30 4.16 4.30 5.16 3.82 3.15 6.76 12.42 12.06 3.40 5.28 3.46