Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SAMSN1 Gene 0 55.39 6.28 1.73 9.40 32.04 8.28 11.34 16.23 18.85 4.59 217.78 542.16 433.70 250.60 134.25 157.03 37.46 2.53 1.64 3.69 0.25 22.77 0.76 2 285670 Transcript 0 0.00 0.76 0.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.19 0.00 0.00 0.00 0.00 0.46 0.00 0.00 0.00 0.00 3 400566 Transcript 0 6.87 12.71 0.00 1.43 0.00 0.00 0.66 3.76 7.64 3.36 82.07 203.77 137.41 29.85 15.73 30.83 18.50 0.00 0.00 1.06 0.00 1.19 0.00 4 400564 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 493640 Transcript 0 0.00 0.28 0.00 0.00 4.31 0.00 0.00 0.00 0.50 0.47 1.42 1.54 3.18 3.93 0.32 0.41 0.00 1.01 0.00 0.29 0.00 0.00 0.00 6 389440 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.35 0.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 463807 Transcript 0 19.40 0.88 0.26 0.44 3.39 0.27 2.35 1.68 1.87 0.06 10.78 48.80 33.61 12.00 4.02 13.24 1.79 0.20 0.00 0.00 0.00 0.68 0.21 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.00 0.22 0.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.01 0.77 0.00 0.00 0.00 0.00 1.84 0.00 0.00 0.00 0.00 11 E2a_E7a KnownJunction 0 0.00 2.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E3_Ac NovelBoundary 1 50.97 9.21 0.00 0.00 42.36 14.20 22.21 4.11 3.39 3.98 281.07 11.70 20.29 149.57 101.98 256.94 60.68 0.00 0.00 5.62 0.00 4.78 0.00 13 ER3a ExonRegion 0 0.71 0.68 0.00 0.00 0.00 0.00 1.32 1.73 0.00 0.00 12.89 0.00 0.00 0.54 2.90 15.85 1.10 0.00 0.00 2.13 0.00 0.00 0.00 14 ER3b ExonRegion 1 15.87 4.14 0.00 0.00 10.89 5.63 9.22 2.28 1.50 1.06 137.86 1.24 8.04 62.88 43.42 122.49 19.22 0.00 0.00 2.13 0.00 1.34 0.00 15 ER3c ExonRegion 1 60.20 24.55 0.00 3.91 26.66 4.60 14.40 9.15 16.18 7.69 361.47 95.97 77.60 291.26 137.97 323.41 81.06 7.37 1.50 3.41 0.00 24.10 0.00 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 12.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E3a_E7a KnownJunction 0 13.04 24.73 0.00 2.86 0.00 0.00 0.00 5.79 15.28 6.72 151.25 407.53 274.82 59.16 28.56 45.80 35.90 0.00 0.00 0.00 0.00 2.39 0.00 18 E3a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER4a ExonRegion 0 0.00 0.84 0.00 0.00 0.78 0.00 0.00 0.00 1.51 1.41 4.26 4.61 9.53 3.90 0.96 1.22 0.00 0.46 0.00 0.88 0.00 0.00 0.00 20 E4a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.89 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.70 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER7a ExonRegion 0 19.52 13.16 0.00 4.84 0.60 0.00 0.11 12.73 22.18 8.40 541.57 432.86 319.11 151.71 79.99 99.78 128.73 2.04 0.00 0.48 0.72 5.91 0.00 24 E7_Da NovelBoundary 0 31.49 13.81 0.00 7.62 2.97 0.00 0.00 15.36 27.69 10.61 743.19 403.78 291.38 256.58 165.77 177.47 201.03 0.00 0.00 0.00 2.47 12.92 0.00 25 E7b_E8a KnownJunction 1 13.41 27.56 0.00 10.09 21.73 11.24 7.20 15.98 14.61 9.29 254.91 520.82 466.37 834.72 303.98 529.01 23.94 6.80 0.00 13.04 5.81 47.76 0.00 26 ER7b ExonRegion 0 18.40 18.57 0.00 8.65 9.54 6.06 2.24 15.11 20.08 10.42 550.71 472.48 432.71 550.29 212.42 404.47 130.89 5.22 0.00 8.23 4.22 29.53 0.00 27 E8_Aa NovelBoundary 0 17.71 0.00 0.00 3.56 0.00 0.00 1.77 1.68 4.37 0.00 4.90 31.36 19.97 19.90 5.93 7.43 16.92 0.00 0.00 0.00 0.00 0.00 0.00 28 ER8a ExonRegion 1 41.15 22.44 0.00 10.32 36.76 12.41 18.52 17.68 16.10 5.31 242.42 1124.59 720.30 410.08 203.24 324.64 39.24 4.61 5.65 8.89 1.37 27.18 1.00 29 E8a_E9a KnownJunction 1 122.54 47.43 0.00 13.15 24.87 9.99 4.11 25.55 21.87 1.67 358.09 1632.08 1001.23 547.36 271.71 264.20 85.65 6.43 14.68 17.51 0.00 28.66 0.00 30 E9_Aa NovelBoundary 0 27.71 0.00 1.69 2.06 0.00 0.00 4.50 4.35 5.32 1.37 13.74 67.22 82.95 35.85 10.63 8.63 0.00 0.00 0.00 3.26 0.00 3.12 0.00 31 ER9a ExonRegion 0 65.92 19.99 0.00 13.04 28.98 13.94 11.52 15.97 23.81 5.98 441.77 1177.65 889.48 550.89 222.66 322.13 89.99 7.35 2.94 11.87 0.00 33.91 0.00 32 E9a_E10a KnownJunction 0 73.72 15.92 0.00 12.35 62.39 22.15 7.95 19.92 37.56 2.77 528.77 720.68 485.20 674.62 239.32 360.93 120.15 8.58 17.13 8.82 0.00 30.92 0.00 33 ER10a ExonRegion 0 59.90 8.16 1.23 11.79 28.36 13.91 13.47 24.35 33.77 2.94 490.82 1074.73 900.39 736.86 282.39 418.27 100.24 10.19 8.26 9.99 0.00 36.34 0.00 34 E10a_E11a KnownJunction 1 75.57 2.89 0.00 21.04 41.43 13.63 10.60 15.03 43.49 2.71 540.56 967.82 1019.41 747.78 190.25 429.55 91.54 13.85 4.33 5.69 0.00 47.27 0.00 35 ER11a ExonRegion 0 107.57 10.73 2.34 21.54 62.39 25.55 17.72 28.81 40.50 3.31 626.60 935.70 1027.33 714.14 296.87 429.91 101.69 7.80 8.38 6.87 0.00 43.40 0.00 36 E11_Ab KnownBoundary 0 149.58 16.51 3.55 19.44 117.15 41.62 36.48 23.21 38.31 6.85 515.71 1186.89 981.27 668.02 344.52 332.82 81.81 2.57 0.00 5.31 0.00 37.78 0.00 37 ER11b ExonRegion 0 98.29 4.67 6.32 17.82 65.82 13.69 28.49 31.00 34.76 6.05 602.54 1100.19 835.13 579.79 236.85 366.61 105.71 3.48 3.60 3.73 0.00 39.91 0.00 38 E11a_E12a KnownJunction 0 93.28 8.42 10.76 20.44 50.08 13.40 40.19 28.34 25.98 5.88 606.26 1272.56 932.08 653.78 274.43 495.17 120.15 8.17 3.67 3.13 0.00 45.68 0.00 39 ER12a ExonRegion 0 81.41 3.61 6.00 19.10 72.62 22.18 21.83 24.10 32.75 8.45 520.86 1206.63 919.99 538.81 220.00 315.54 82.37 3.77 2.47 5.16 1.26 40.30 2.98 40 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E12a_E14a KnownJunction 0 108.69 6.05 4.08 16.68 107.73 15.22 30.30 24.15 42.68 12.03 450.06 1129.87 788.10 700.40 385.93 471.67 83.68 2.03 0.00 3.26 4.82 57.07 0.00 42 I12 Intron 0 12.82 0.42 0.06 0.98 4.26 0.38 3.39 1.07 2.04 0.12 22.54 130.23 126.20 25.03 5.78 29.61 4.45 0.19 0.00 0.29 0.00 1.87 0.20 43 I12_AR1 ActiveIntronRegion 0 9.22 0.30 0.27 0.30 9.11 0.54 3.34 0.38 2.80 0.14 23.69 178.53 142.80 22.43 5.41 26.47 7.16 0.00 0.00 0.32 0.00 1.93 0.44 44 I12_SR1 SilentIntronRegion 0 10.61 0.23 0.00 1.37 5.12 0.00 3.42 1.74 2.22 0.28 21.35 160.72 182.19 31.13 5.21 36.37 3.10 0.00 0.00 0.24 0.00 3.22 0.33 45 I12_AR3 ActiveIntronRegion 0 11.99 0.24 0.00 1.10 1.28 0.88 2.50 0.98 2.11 0.00 24.18 73.71 80.85 24.03 6.01 30.26 4.00 0.17 0.00 0.37 0.00 0.75 0.00 46 I12_SR2 SilentIntronRegion 0 23.42 1.26 0.00 1.04 1.10 0.00 4.98 0.97 0.54 0.00 20.46 105.64 79.62 19.39 6.98 20.67 4.00 0.84 0.00 0.24 0.00 1.29 0.00 47 ER13a ExonRegion 0 38.79 1.77 0.53 0.88 6.78 0.53 4.70 3.36 3.73 0.12 21.56 97.60 60.57 23.99 8.05 26.48 3.59 0.40 0.00 0.00 0.00 1.36 0.43 48 E13_Da NovelBoundary 0 155.43 0.00 3.67 3.53 40.15 0.00 8.52 5.09 5.03 3.33 30.06 151.55 101.94 62.92 14.34 53.23 4.77 0.00 0.00 0.00 0.00 2.94 0.00 49 I13_AR1 ActiveIntronRegion 0 13.58 0.00 0.00 0.00 10.11 0.00 2.00 1.95 1.39 1.94 12.41 84.63 61.87 10.30 2.62 6.74 4.99 0.00 0.00 0.00 0.00 1.57 0.00 50 I13_AR2 ActiveIntronRegion 0 4.55 0.00 0.00 0.52 3.43 0.00 1.36 0.68 1.42 0.00 14.10 119.44 79.07 24.24 4.72 4.53 2.06 0.00 0.00 1.09 0.00 1.60 0.00 51 I13_AR3 ActiveIntronRegion 0 3.85 0.22 0.00 1.52 1.83 1.37 2.56 0.00 3.29 0.42 22.90 47.78 31.17 30.21 2.14 34.44 3.20 0.00 0.00 0.47 0.00 2.77 0.00 52 E14_Aa NovelBoundary 0 22.45 0.00 0.00 9.89 4.33 2.38 17.09 5.83 8.04 8.89 27.48 86.58 35.39 52.98 51.80 19.48 0.00 0.00 0.00 0.00 0.00 5.33 0.00 53 ER14a ExonRegion 0 92.91 5.80 3.55 18.33 62.71 13.08 18.81 32.58 33.95 9.69 246.05 828.43 677.34 293.39 228.70 158.89 35.05 1.82 0.18 5.20 0.29 43.83 1.69