Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CXADR Gene 0 22.18 158.20 38.67 34.22 48.82 49.91 78.39 103.48 97.16 150.46 0.41 5.24 1.34 0.65 1.19 1.85 0.90 65.37 24.10 97.59 9.53 4.00 5.17 2 284878 Transcript 0 17.20 109.75 28.43 25.17 35.99 33.05 47.94 71.12 55.45 98.01 0.34 2.84 1.14 0.58 1.23 1.18 0.77 25.28 14.37 44.58 3.46 2.06 3.15 3 400166 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 356275 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 400165 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 400169 Transcript 0 1.27 3.63 2.34 1.57 7.56 3.23 4.55 4.24 0.33 3.56 0.00 1.03 0.69 0.16 0.00 0.35 0.00 1.12 0.95 1.52 1.59 2.73 2.71 7 400162 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 346439 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 306618 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ER1a ExonRegion 0 0.07 2.81 0.17 0.00 0.34 1.47 3.27 0.31 0.81 0.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 1.04 1.94 0.40 0.00 0.85 11 E1_Ab KnownBoundary 0 9.63 60.98 9.28 0.00 7.05 45.43 76.62 8.91 15.48 23.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 178.71 8.85 51.45 7.91 0.00 3.67 12 ER1b ExonRegion 0 2.75 37.33 4.99 0.19 14.43 43.75 45.05 7.24 9.28 24.41 0.00 0.00 0.00 0.17 0.00 0.00 0.00 57.94 14.56 43.62 11.20 2.53 0.98 13 E1_Ac KnownBoundary 0 3.78 9.80 1.42 3.43 4.24 5.28 15.63 6.78 13.83 23.21 0.00 0.00 0.00 2.30 0.00 0.00 0.00 29.43 3.95 7.73 7.72 0.00 7.60 14 ER1c ExonRegion 0 1.06 7.55 1.52 1.36 4.40 0.61 16.39 16.38 18.73 29.19 0.00 0.00 0.00 1.28 0.00 0.00 0.00 34.80 5.69 17.63 11.28 0.00 3.43 15 E1a_E4b KnownJunction 0 0.00 6.64 2.60 1.76 0.00 5.34 22.66 28.75 30.53 42.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46.97 8.47 40.91 8.59 0.00 3.84 16 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 0 0.00 2.54 2.14 0.34 1.34 0.00 5.30 6.48 7.10 10.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.86 2.39 7.98 3.86 0.00 0.73 19 ER4b ExonRegion 0 1.95 45.58 17.85 8.46 7.25 22.62 32.13 38.68 58.20 77.19 0.00 0.00 0.00 0.39 0.00 1.18 0.00 112.56 20.23 108.84 24.07 4.05 7.32 20 E4a_E5a KnownJunction 0 0.00 60.71 22.68 15.08 40.32 72.00 107.01 72.45 113.97 124.48 0.00 0.00 0.00 0.00 0.00 11.11 0.00 95.59 12.89 90.76 16.19 2.94 12.04 21 E4a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 I4_AR1 ActiveIntronRegion 0 0.91 2.87 0.99 1.16 1.52 0.70 5.66 1.48 1.81 3.01 0.00 0.00 0.00 0.00 0.00 0.56 0.00 14.69 0.60 6.44 0.42 0.00 0.00 23 ER5a ExonRegion 0 7.58 120.41 27.00 23.28 22.22 58.82 83.50 76.18 124.94 156.35 0.00 8.05 0.00 0.02 0.00 2.00 1.06 105.02 31.56 179.81 20.54 5.53 7.08 24 E5a_E6a KnownJunction 0 6.96 112.02 19.66 29.87 38.96 62.29 83.73 87.86 138.22 212.91 0.00 0.00 0.00 0.00 0.00 0.00 4.30 98.24 22.78 274.20 13.10 0.00 15.11 25 E5a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER6a ExonRegion 0 8.25 137.75 23.75 32.55 28.59 49.17 95.52 95.90 141.94 188.55 0.63 14.10 0.00 0.00 0.00 0.97 1.84 179.50 36.71 228.12 13.59 3.91 10.90 27 E6_Da NovelBoundary 0 0.00 0.00 1.83 2.06 0.00 0.00 5.96 13.72 4.80 8.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.70 0.00 5.62 0.00 0.00 0.00 28 E6a_E7a KnownJunction 0 21.19 123.86 24.10 36.39 40.07 64.57 100.60 95.37 129.92 184.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 164.03 39.91 219.81 8.53 9.06 4.10 29 E6a_E9a KnownJunction 0 0.00 9.01 0.00 3.20 8.23 2.90 5.70 6.90 3.62 8.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.80 0.00 33.94 2.66 0.00 0.00 30 ER7a ExonRegion 0 13.18 115.77 20.79 20.25 26.69 52.30 89.41 100.32 128.43 177.95 0.00 8.55 1.60 0.00 0.00 0.00 0.00 190.23 37.63 205.05 26.62 2.90 17.91 31 E7a_E8a KnownJunction 0 21.04 104.06 33.53 22.24 41.09 103.75 95.83 72.08 121.47 146.26 0.00 18.61 0.00 0.00 0.00 0.00 0.00 227.29 44.42 156.09 27.86 0.00 17.41 32 ER8a ExonRegion 0 6.82 119.64 24.90 21.78 27.76 47.06 77.97 98.32 134.04 163.29 0.00 7.16 0.00 0.00 0.00 4.21 0.66 323.08 57.54 190.11 37.97 2.79 12.61 33 E8a_E9a KnownJunction 0 10.74 155.76 29.33 20.64 40.49 96.59 86.43 133.33 167.01 215.73 0.00 18.46 0.00 0.00 0.00 0.00 4.77 301.49 110.59 310.57 63.32 9.06 12.04 34 ER9a ExonRegion 0 9.91 98.87 23.32 18.90 28.54 42.94 65.36 106.53 139.81 191.59 0.00 4.62 0.00 0.00 0.00 0.35 1.27 156.72 39.39 217.91 40.92 3.37 8.27 35 E9_Da KnownBoundary 0 12.89 84.66 29.39 21.68 27.50 32.71 63.86 83.67 114.93 158.03 0.00 6.30 0.00 0.00 0.00 0.00 0.00 147.53 12.71 170.85 25.95 5.88 3.41 36 ER9b ExonRegion 0 14.51 150.47 35.43 26.76 30.38 61.06 118.73 113.49 154.47 188.36 0.00 6.15 0.00 0.00 0.00 7.48 1.36 384.27 67.15 222.73 43.45 3.90 12.48 37 E9_Db KnownBoundary 0 15.56 96.30 16.00 18.05 6.96 60.99 62.27 61.32 96.06 102.88 0.00 0.00 0.00 0.00 0.00 11.79 0.00 246.69 66.83 143.05 18.84 4.90 3.50 38 E9b_E10a KnownJunction 0 0.00 0.00 1.48 0.00 10.78 2.27 3.75 1.68 0.00 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 2.59 0.00 3.93 39 E9_Dc KnownBoundary 0 6.89 73.74 11.12 5.03 7.56 19.36 34.14 26.45 44.76 75.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66.12 8.75 68.65 24.22 0.00 0.00 40 ER9c ExonRegion 0 14.82 148.45 25.73 22.49 16.72 71.06 99.63 82.97 134.94 198.13 0.00 0.00 0.00 0.00 0.00 8.92 0.00 328.90 66.89 215.96 40.22 6.25 2.94 41 ER9d ExonRegion 0 15.99 176.45 29.60 24.05 40.24 66.98 111.55 88.22 125.85 179.50 0.42 9.04 0.00 0.29 0.00 2.33 0.00 140.12 29.25 143.76 23.37 2.95 3.11 42 E9_Dd KnownBoundary 0 39.56 352.04 33.03 34.09 125.13 152.30 399.94 108.97 123.52 183.71 0.00 6.30 0.00 0.00 0.00 0.00 0.00 26.24 12.99 105.97 5.99 0.00 3.50 43 ER9e ExonRegion 0 25.07 201.02 43.91 39.17 60.58 57.05 110.83 126.83 140.51 176.12 0.36 6.69 0.90 0.33 0.19 1.67 0.31 51.22 23.42 142.66 8.31 6.19 4.54 44 E9_De KnownBoundary 0 9.93 83.54 11.38 9.92 54.84 44.24 99.06 22.47 27.26 40.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.00 8.75 61.10 0.00 4.65 0.00 45 ER9f ExonRegion 0 34.33 216.70 56.69 50.33 71.65 64.64 92.61 141.94 110.09 195.30 0.69 5.69 2.28 1.16 2.47 2.35 1.55 46.29 27.69 87.22 6.53 4.12 5.46 46 ER10a ExonRegion 0 2.54 7.27 3.21 3.14 4.34 4.19 5.35 6.79 0.66 4.39 0.00 2.06 1.38 0.32 0.00 0.71 0.00 0.12 1.90 3.04 0.58 5.45 1.50