Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SOD1 Gene 0 179.37 266.35 383.45 321.36 244.54 549.89 153.91 281.02 374.73 260.42 396.61 197.54 58.24 441.77 436.39 356.24 348.87 296.59 413.50 336.07 248.66 303.78 198.36 2 270142 Transcript 1 39.58 71.69 295.45 147.28 41.30 167.18 34.59 156.08 238.17 195.05 852.24 136.09 37.84 227.01 204.58 76.92 458.89 91.20 208.55 252.16 527.58 89.95 45.20 3 389995 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 476106 Transcript 0 0.80 1.16 1.70 0.58 1.25 2.90 0.61 0.24 1.05 0.63 0.63 4.73 1.41 1.85 1.20 2.74 0.96 0.76 2.40 3.21 2.08 1.17 2.73 5 470944 Transcript 0 8.37 18.05 13.80 9.77 14.94 20.58 8.73 3.71 11.43 3.27 2.32 3.52 1.33 8.51 5.05 8.91 7.65 3.81 3.01 4.79 5.39 5.64 5.76 6 ER1a ExonRegion 0 9.45 20.83 9.29 4.75 16.47 101.02 25.27 5.38 7.58 3.13 40.16 0.00 4.59 11.37 14.57 5.42 3.89 7.97 24.42 9.98 22.43 5.93 14.42 7 E1_Ab KnownBoundary 0 24.00 43.41 10.29 11.52 31.66 163.71 43.90 7.39 6.39 6.02 71.39 0.00 13.31 34.55 38.82 7.95 13.56 8.75 35.20 14.57 39.41 2.76 24.07 8 E1_Ac KnownBoundary 1 153.95 146.42 28.18 19.84 254.16 729.47 193.57 12.57 27.86 8.30 599.26 25.51 12.17 114.37 139.19 58.62 52.17 37.43 160.00 133.40 153.76 87.44 93.90 9 ER1b ExonRegion 1 111.94 154.33 75.70 41.04 256.48 790.03 205.07 54.73 63.54 48.51 536.92 1.92 21.89 112.67 126.26 65.94 71.27 118.12 195.13 143.81 216.21 106.72 136.28 10 E1_Ad KnownBoundary 1 699.31 737.04 341.56 239.23 1096.01 2720.99 680.99 191.53 291.11 174.90 929.87 6.30 38.80 1176.30 1129.74 832.26 688.92 629.76 907.51 662.37 771.78 529.00 534.03 11 ER1c ExonRegion 1 465.50 557.58 283.52 194.64 810.42 2349.10 550.69 159.23 249.34 143.51 1024.07 4.87 44.56 866.37 751.06 603.90 530.41 561.48 662.16 520.48 628.75 390.66 445.08 12 ER1d ExonRegion 1 1180.25 1389.67 848.58 685.82 1248.15 3922.40 956.98 469.84 770.00 433.38 1098.02 43.53 41.27 1790.02 1639.01 2107.83 1303.50 1735.33 1620.76 1175.71 993.46 894.25 1199.99 13 E1_Da KnownBoundary 1 307.61 216.87 671.74 562.03 138.71 350.93 121.09 378.91 545.39 329.25 244.90 70.52 28.73 137.44 257.49 391.78 151.75 849.42 372.72 199.36 121.08 81.13 164.41 14 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1e ExonRegion 1 115.29 119.16 480.84 309.47 68.87 226.39 56.00 250.17 370.36 286.48 828.20 133.68 119.55 242.88 308.55 239.39 404.74 393.54 316.64 254.87 483.85 103.23 105.51 16 E1_Db KnownBoundary 0 0.00 0.00 1.21 3.86 0.00 0.00 0.00 0.00 5.18 0.00 9.53 0.00 0.00 5.42 5.19 0.00 8.42 0.00 0.00 0.00 8.03 0.00 3.59 17 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E1b_E3a KnownJunction 1 69.72 122.54 581.62 289.81 66.13 233.33 43.90 306.78 468.77 386.97 1664.32 272.19 71.10 442.64 394.59 148.42 913.88 174.44 392.67 494.34 1032.73 173.96 75.97 19 E1b_E4a NovelJunction 0 0.00 3.09 11.21 2.76 3.48 0.00 0.00 0.00 5.09 7.36 21.90 0.00 0.00 10.07 14.09 4.02 13.74 4.52 4.05 3.26 14.64 0.00 0.00 20 ER1f ExonRegion 0 6.52 11.17 12.64 9.45 12.13 17.48 7.26 4.95 12.25 6.53 4.64 7.04 2.65 12.31 5.64 11.07 11.09 7.61 6.03 6.31 8.38 11.27 11.52 21 E1c_E3a KnownJunction 0 10.22 24.93 14.96 10.09 17.74 23.68 10.20 2.46 10.62 0.00 0.00 0.00 0.00 4.71 4.45 6.75 4.21 0.00 0.00 3.26 2.41 0.00 0.00 22 E2_Aa NovelBoundary 0 67.35 63.54 97.51 63.26 50.34 43.61 85.41 93.07 60.33 60.36 15.48 12.45 14.77 9.95 21.39 28.80 48.81 129.25 36.24 83.73 39.97 15.00 41.23 23 ER2a ExonRegion 0 2.41 3.47 5.11 1.73 3.75 8.71 1.84 0.73 3.15 1.88 1.88 14.18 4.24 5.54 3.59 8.23 2.89 2.29 7.21 9.62 6.24 3.52 8.18 24 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 I2_AR3 ActiveIntronRegion 0 16.69 12.28 23.94 10.48 27.94 14.39 8.10 7.51 11.99 1.28 7.10 14.90 15.24 16.49 10.10 5.72 4.00 4.62 10.35 4.13 1.19 11.06 5.70 26 I2_AR4 ActiveIntronRegion 0 14.82 3.78 20.13 6.81 8.03 2.10 6.62 5.19 4.94 2.29 4.14 0.00 18.76 4.87 6.22 3.82 3.30 0.00 3.64 2.13 0.00 6.85 5.87 27 I2_AR5 ActiveIntronRegion 0 12.09 2.76 18.29 6.23 6.12 2.23 5.39 4.57 2.12 2.29 2.62 0.00 15.75 6.50 10.78 13.16 3.07 0.79 6.37 3.50 0.00 7.74 10.70 28 ER3a ExonRegion 0 215.14 292.84 1049.57 758.78 239.47 381.64 121.29 719.25 1019.89 682.48 1642.51 415.27 114.01 1947.37 1835.30 1221.57 1559.21 1130.25 1549.56 1286.35 1138.73 1088.46 710.06 29 E3a_E4a KnownJunction 1 302.57 411.44 1574.57 1292.91 271.99 480.69 141.94 1003.32 1293.13 802.26 865.64 350.81 150.48 1993.36 2979.18 2860.19 635.44 2453.87 2326.28 1216.15 543.95 1498.02 1475.59 30 ER4a ExonRegion 1 262.09 428.30 1382.24 1073.91 1158.67 2082.99 346.14 912.57 1126.46 764.31 1152.09 577.98 209.85 1456.74 1683.43 1913.62 925.24 1759.90 1449.93 1087.23 782.41 763.91 1098.93 31 E4a_E5a KnownJunction 0 280.05 542.21 1246.88 949.43 2183.36 4312.57 776.16 909.91 1097.93 827.05 1352.03 565.83 131.32 1300.91 1477.60 747.67 1148.48 804.07 1070.62 1053.93 815.21 706.08 322.84 32 I4 Intron 0 70.13 54.99 48.87 43.68 51.55 33.14 26.53 33.74 25.40 29.94 15.85 26.11 11.19 13.10 17.60 11.87 10.17 13.34 21.87 29.81 8.02 22.04 13.17 33 I4_AR1 ActiveIntronRegion 0 70.32 55.14 49.00 43.80 51.69 33.23 26.60 33.84 25.47 30.02 15.89 26.18 11.21 13.13 17.65 11.89 10.20 13.37 21.93 29.89 8.04 22.10 13.21 34 E5_Aa NovelBoundary 0 77.87 102.02 70.90 62.26 111.38 73.54 35.20 42.72 54.22 61.19 28.06 30.91 26.78 29.37 24.97 0.00 8.13 26.78 25.32 35.79 8.83 25.96 7.85 35 ER5a ExonRegion 0 190.36 843.23 1132.14 888.76 1282.10 3434.14 1023.89 907.09 1136.20 819.87 1485.62 658.23 164.71 1191.85 1294.75 751.24 1198.78 663.67 1197.77 1043.18 833.40 867.22 334.04 36 E5_Da KnownBoundary 0 337.02 1795.93 1266.13 1033.40 417.32 1772.22 709.25 934.31 1200.54 904.23 1381.51 784.01 233.26 1370.25 1408.00 754.50 1181.86 624.04 1376.70 1088.38 847.65 959.65 372.10 37 ER5b ExonRegion 0 514.69 1429.73 1230.20 1028.82 340.69 1127.25 382.82 930.01 1194.83 872.46 1222.44 845.65 176.98 1440.93 1316.57 828.44 1142.60 629.81 1230.30 1017.46 838.51 904.49 421.75 38 E5b_E6a KnownJunction 0 996.55 1486.25 1416.36 1227.95 407.73 876.99 240.64 1014.04 1326.14 937.67 1050.06 884.39 148.04 1557.84 1384.64 969.57 1134.64 625.61 1300.56 1042.43 780.37 936.75 516.19 39 I5 Intron 0 40.37 84.45 33.87 39.88 60.32 46.76 40.87 38.81 30.64 43.30 9.22 21.85 11.19 8.71 7.90 6.52 6.45 12.83 28.56 51.14 3.88 25.35 11.76 40 I5_AR1 ActiveIntronRegion 0 48.03 84.49 33.14 41.16 66.07 41.67 39.02 29.55 27.95 39.26 9.73 14.38 6.84 6.73 7.21 6.62 6.66 11.91 22.55 43.15 3.47 22.56 10.99 41 I5_SR1 SilentIntronRegion 0 33.56 97.38 50.51 41.13 53.24 46.96 35.78 42.07 32.06 47.58 6.99 31.66 13.76 12.17 13.48 7.69 10.14 12.67 37.72 56.06 4.41 26.03 12.94 42 I5_AR2 ActiveIntronRegion 0 35.70 81.34 29.87 38.53 56.90 51.30 44.16 46.39 32.75 45.89 9.42 25.75 14.41 9.45 7.02 6.02 5.24 13.75 31.39 57.10 4.17 27.79 12.21 43 E6_Aa NovelBoundary 1 39.49 94.85 12.63 26.84 49.75 57.69 73.49 29.90 39.06 59.12 2.58 17.11 32.30 14.24 0.00 3.33 4.77 25.74 19.20 29.02 8.71 15.06 0.00 44 ER6a ExonRegion 0 384.75 487.11 713.09 668.96 305.26 462.67 170.58 580.76 751.90 540.03 494.19 464.84 124.68 595.97 584.67 392.58 449.56 253.11 601.90 504.97 240.53 559.45 202.41 45 IG11 Intergenic 0 9.48 22.38 7.71 14.18 25.18 26.44 22.01 17.46 23.79 29.44 6.65 14.08 8.35 7.86 3.16 5.79 7.43 13.22 13.54 50.06 6.24 20.72 7.95 46 IG11_AR1 ActiveIntergenicRegion 0 10.37 23.51 10.41 16.91 29.07 29.86 23.52 19.60 29.09 37.27 6.27 15.60 9.94 5.67 2.96 3.89 7.80 12.50 14.59 55.51 5.59 23.10 7.65 47 IG11_SR1 SilentIntergenicRegion 0 8.20 18.84 4.88 12.72 28.86 28.66 24.82 19.38 21.80 19.04 9.44 15.54 6.33 11.04 5.26 9.16 9.54 17.30 13.58 62.11 6.31 21.00 6.87 48 IG11_AR2 ActiveIntergenicRegion 0 7.92 21.29 2.50 8.30 14.32 17.35 17.21 11.56 12.00 15.26 6.37 9.83 5.45 11.77 2.76 8.91 5.66 13.23 11.05 31.86 7.80 14.93 9.17