Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PCMTD2 Gene 0 292.57 731.49 183.37 453.46 423.36 1240.03 216.71 247.24 328.39 265.90 98.58 109.58 83.29 90.38 65.72 68.30 67.64 153.36 124.00 187.33 87.58 145.00 68.14 2 369758 Transcript 0 5.95 23.91 2.71 15.44 12.64 63.11 10.55 13.05 9.56 13.44 3.34 3.15 0.00 12.62 0.39 6.14 9.16 18.22 4.86 14.49 5.98 2.07 6.03 3 308824 Transcript 0 147.31 380.89 80.96 223.22 188.34 953.45 117.34 161.56 256.64 188.18 90.44 100.92 122.28 105.39 54.81 90.59 83.95 236.27 157.38 171.33 145.03 136.45 86.18 4 266078 Transcript 0 0.00 0.15 0.04 0.00 0.00 29.30 0.00 0.03 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.06 0.00 0.00 0.00 0.00 0.00 5 IG6 Intergenic 0 0.94 3.12 7.70 9.03 6.33 14.66 8.13 8.73 21.22 8.49 0.06 0.03 0.00 0.00 0.00 0.02 0.00 5.43 5.05 6.16 0.02 0.02 0.00 6 IG6_SR1 SilentIntergenicRegion 0 0.96 3.24 7.96 9.42 6.56 15.20 8.45 9.10 21.99 8.80 0.06 0.03 0.00 0.00 0.00 0.02 0.00 5.58 5.26 6.39 0.02 0.02 0.00 7 ER1a ExonRegion 0 0.94 5.06 0.40 0.06 1.59 13.60 1.54 0.14 1.00 1.81 1.41 0.00 0.00 2.11 0.78 0.48 1.03 0.62 0.13 2.70 1.28 1.01 0.71 8 E1_Ab KnownBoundary 0 5.63 34.66 4.49 0.00 11.46 108.57 11.75 0.00 4.08 7.28 11.37 0.00 0.00 14.19 4.45 3.42 7.39 14.30 8.09 12.53 5.56 7.41 3.59 9 ER1b ExonRegion 0 19.75 83.40 3.58 9.49 24.58 256.01 23.47 11.15 23.12 35.72 9.10 4.41 0.28 13.33 8.62 8.36 21.07 13.73 14.02 61.56 27.63 20.96 14.45 10 E1a_E2a KnownJunction 0 0.00 22.89 4.64 10.65 4.07 12.49 4.33 7.27 17.22 17.14 2.11 5.85 5.84 2.47 5.19 3.76 0.00 5.93 7.53 9.40 17.73 3.00 0.00 11 I1 Intron 1 33.94 129.17 23.23 69.79 71.40 229.91 59.15 48.68 96.14 64.22 39.41 55.25 55.64 52.69 12.58 32.62 35.61 69.39 31.63 74.98 41.10 35.77 36.16 12 I1_AR1 ActiveIntronRegion 1 33.96 129.26 23.25 69.84 71.45 230.07 59.18 48.71 96.21 64.26 39.44 55.29 55.68 52.73 12.58 32.64 35.63 69.44 31.65 75.03 41.13 35.79 36.18 13 E2_Aa NovelBoundary 1 103.87 281.79 50.44 138.78 136.59 395.28 65.45 83.30 97.74 79.38 36.11 12.30 41.72 59.63 9.89 22.73 35.25 45.10 38.87 76.13 27.06 47.09 36.62 14 ER2a ExonRegion 1 126.91 461.78 102.68 343.34 211.90 914.72 155.54 196.14 321.59 238.07 141.83 108.33 77.92 124.08 38.58 105.91 89.83 297.53 158.97 245.37 167.93 134.33 98.72 15 E2a_E3a KnownJunction 0 161.14 632.45 104.73 321.74 301.19 1011.35 179.83 203.44 330.67 254.22 155.72 156.80 120.93 143.98 52.66 91.17 95.28 289.80 173.65 211.57 203.00 152.23 103.03 16 I2_SR3 SilentIntronRegion 0 5.10 21.04 16.28 29.08 14.31 21.32 5.86 15.30 18.61 16.19 5.33 4.76 7.49 4.38 1.48 3.98 9.79 23.01 8.86 24.00 16.16 11.35 18.25 17 I2_AR5 ActiveIntronRegion 0 18.08 32.32 14.00 20.27 14.06 39.21 5.71 16.92 25.23 20.54 6.31 2.57 7.27 4.67 3.26 3.23 11.37 25.59 6.29 21.12 24.78 4.91 14.39 18 I2_SR4 SilentIntronRegion 0 10.40 15.75 12.48 20.02 10.99 37.71 8.98 16.06 17.65 20.92 4.59 2.40 5.42 2.50 5.14 2.11 8.67 36.40 2.92 23.66 15.98 4.77 11.15 19 I2_AR6 ActiveIntronRegion 0 6.67 16.35 7.26 16.42 11.62 31.77 4.58 10.93 13.74 13.27 6.97 1.01 1.88 4.94 4.11 5.89 6.79 20.81 9.29 15.92 10.68 4.94 15.56 20 ER3a ExonRegion 1 177.89 668.83 119.04 397.59 306.93 1114.26 159.33 228.27 385.26 301.09 164.93 130.39 143.71 145.71 47.86 125.00 119.02 384.31 214.87 312.23 167.57 196.74 134.00 21 E3a_E4a KnownJunction 0 246.93 705.14 117.20 464.98 373.34 1182.56 181.16 294.75 438.57 347.46 205.42 136.84 205.51 154.57 57.36 159.45 169.71 390.08 228.34 331.03 223.33 223.93 155.45 22 ER4a ExonRegion 0 186.16 547.07 132.26 380.92 243.87 1176.96 194.91 252.22 381.16 296.33 148.11 122.11 124.75 144.94 51.85 131.98 144.03 370.01 187.21 274.86 188.16 186.21 109.71 23 E4a_E5a KnownJunction 0 267.01 596.74 111.85 357.40 304.67 1355.30 193.48 254.25 399.59 278.13 131.09 144.05 167.03 158.28 95.31 132.36 115.10 377.06 240.20 289.16 219.74 231.40 137.69 24 E4a_E5b KnownJunction 0 10.96 42.76 5.03 30.83 23.68 112.61 19.56 25.96 18.11 25.06 5.26 6.30 0.00 23.13 0.00 11.79 17.30 35.82 9.60 26.27 10.69 3.12 11.35 25 I4_AR2 ActiveIntronRegion 0 21.76 75.05 15.76 40.43 35.08 79.31 18.93 20.30 38.82 24.51 8.75 17.75 22.40 7.57 6.34 12.64 6.22 26.31 19.49 26.00 8.47 11.35 13.43 26 I4_SR3 SilentIntronRegion 0 28.65 56.88 11.95 33.04 28.22 87.11 23.08 25.58 41.34 25.83 5.43 10.05 16.98 5.36 5.87 7.31 4.56 18.29 13.72 18.88 2.86 10.12 4.65 27 I4_AR3 ActiveIntronRegion 0 8.25 13.83 3.06 6.27 6.02 38.97 11.39 6.05 8.03 0.75 3.00 0.00 16.88 1.06 0.58 0.00 5.94 1.29 1.91 0.85 0.77 0.00 1.32 28 ER5a ExonRegion 0 159.67 496.32 126.87 304.64 249.11 1474.60 151.14 228.35 367.85 283.43 140.23 150.05 196.07 156.59 67.97 139.40 136.75 331.74 227.48 223.97 215.35 177.94 119.69 29 E5_Ab KnownBoundary 1 164.18 501.95 178.79 330.39 271.82 1810.49 214.01 270.43 352.46 317.45 118.03 130.84 202.75 159.40 55.01 72.20 112.20 265.96 163.30 210.73 191.39 112.42 108.50 30 ER5b ExonRegion 0 119.23 462.01 154.31 319.92 208.33 1342.95 145.26 262.64 371.15 289.21 146.49 141.64 135.56 141.61 49.18 110.18 128.73 263.00 147.66 238.20 178.34 130.37 97.33 31 E5a_E7a KnownJunction 0 106.76 397.69 140.92 343.45 171.73 1127.42 136.20 257.70 418.72 270.04 102.24 109.99 132.13 101.60 51.92 118.69 125.67 369.43 116.24 245.06 172.17 181.74 78.88 32 ER6a ExonRegion 0 0.00 0.30 0.07 0.00 0.00 11.87 0.00 0.05 0.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 0.00 0.00 0.00 33 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 46.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.97 0.00 0.00 0.00 0.00 0.00 34 ER7a ExonRegion 0 347.10 833.38 212.32 509.70 498.07 1355.46 244.11 270.83 345.17 282.98 93.61 114.41 81.57 85.08 74.68 60.64 60.42 121.22 118.65 181.18 70.78 150.99 62.68 35 ER7b ExonRegion 0 15.24 49.62 4.17 7.63 11.24 30.44 7.41 2.07 2.47 2.98 0.00 8.66 3.75 1.30 1.16 0.00 0.00 0.00 4.46 0.85 0.00 0.00 1.17