Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RPS21 Gene 0 82.69 374.79 1962.38 2347.96 936.34 933.96 335.33 614.66 290.83 1919.56 2751.70 175.62 178.45 865.75 2658.11 1024.21 1603.00 646.80 1474.95 1026.38 1335.77 650.83 389.95 2 370592 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 492356 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 317311 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 343986 Transcript 1 83.81 292.43 406.33 340.45 721.92 1030.96 530.64 105.44 57.56 434.22 1088.61 0.00 0.00 611.97 1801.68 388.16 691.87 108.28 396.26 471.06 808.32 140.43 158.58 6 422923 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 450116 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 370562 Transcript 1 12.91 22.82 63.82 68.18 60.98 66.81 28.15 28.28 16.10 65.17 119.77 15.41 8.69 43.04 96.25 46.70 70.36 32.61 41.14 33.84 62.09 20.34 11.61 9 337102 Transcript 0 0.00 0.00 412.05 559.20 0.00 0.00 0.00 84.35 33.03 140.82 1.13 0.00 0.00 0.00 0.00 0.00 0.00 136.13 0.00 0.00 0.00 1.47 0.00 10 IG4_SR3 SilentIntergenicRegion 0 1.61 2.35 7.37 5.17 3.50 3.73 1.81 4.63 5.07 15.24 0.29 1.20 0.59 1.55 3.92 3.01 2.09 6.84 5.55 6.43 2.41 0.51 2.05 11 IG4_AR6 ActiveIntergenicRegion 0 1.85 3.77 10.43 12.31 6.51 3.76 2.29 8.30 6.00 19.94 0.38 0.35 1.10 1.31 3.34 5.10 3.28 11.76 5.47 8.74 2.15 0.61 1.72 12 IG4_SR4 SilentIntergenicRegion 0 2.94 5.54 10.02 11.01 7.12 6.72 3.28 8.29 7.72 15.83 0.25 2.81 1.32 2.44 4.69 5.16 2.74 8.43 7.95 7.46 2.93 0.51 3.05 13 IG4_AR7 ActiveIntergenicRegion 0 5.10 7.65 10.63 16.91 12.30 18.14 12.60 7.00 13.23 25.61 2.46 9.37 11.30 2.21 9.16 11.13 4.36 11.77 12.22 14.75 0.42 2.92 4.48 14 IG4_SR5 SilentIntergenicRegion 0 12.16 16.89 10.11 16.30 9.26 8.76 7.42 12.65 15.03 32.28 2.81 5.85 5.29 3.56 12.36 9.05 8.91 14.37 11.24 12.51 7.32 1.87 7.52 15 IG4_AR8 ActiveIntergenicRegion 0 11.66 10.13 27.91 15.96 4.26 12.48 3.97 10.16 7.19 19.81 6.96 3.28 1.39 11.79 20.86 13.57 9.28 18.89 21.83 12.02 6.40 2.31 6.91 16 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.96 4.78 1.57 3.30 0.00 0.37 1.50 0.00 0.00 0.00 17 ER1b ExonRegion 0 16.05 85.58 71.45 54.37 181.00 275.80 140.45 19.70 16.73 75.53 296.42 0.00 0.00 232.96 718.97 175.42 163.94 32.53 163.52 83.91 281.06 52.09 71.34 18 E1_Da NovelBoundary 0 35.71 168.85 127.70 108.61 419.61 555.36 311.74 47.19 33.82 135.68 574.15 15.91 5.84 363.53 822.80 330.08 319.40 86.31 307.87 174.56 542.22 93.01 134.96 19 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.84 0.00 0.00 20 E1b_E2b KnownJunction 1 1356.68 5638.86 7630.60 9513.84 10821.74 10990.38 5007.43 2373.38 1025.25 7699.95 20628.07 46.97 104.38 6578.52 34514.09 6579.38 12843.65 2982.16 9224.27 7230.95 10578.51 3434.34 2575.66 21 ER1c ExonRegion 1 83.81 292.43 406.33 340.45 721.92 1030.96 530.64 105.44 57.56 434.22 1088.61 0.00 0.00 611.97 1801.68 388.16 691.87 108.28 396.26 471.06 808.32 140.43 158.58 22 ER1d ExonRegion 1 590.86 2637.78 4603.17 5326.23 5304.07 5749.57 2530.24 1303.83 630.87 4665.67 11631.86 6.25 43.51 3271.25 15188.86 3534.02 7015.14 1772.71 4999.78 3723.39 5950.26 2078.54 1372.55 23 ER2a ExonRegion 1 38.94 190.26 366.58 421.73 393.44 418.25 166.55 107.51 51.83 372.01 923.77 0.87 3.19 269.99 1116.98 289.72 544.12 147.45 407.22 295.32 452.73 193.52 113.35 24 E2_Ac KnownBoundary 1 1296.01 6253.03 11529.40 14074.00 12792.37 12449.59 5217.87 3378.79 1607.91 11378.02 26600.16 90.18 123.69 5048.06 10421.56 8818.46 16169.31 4228.87 12988.23 8831.05 12809.72 5965.06 3581.84 25 ER2b ExonRegion 1 966.66 4669.44 8977.95 10539.72 9704.34 10101.28 4069.12 2643.77 1285.48 9170.84 22319.50 43.78 100.84 6595.01 27107.21 7040.97 13338.74 3585.05 9977.62 7265.70 10986.47 4501.79 2794.05 26 ER2c ExonRegion 1 448.70 2338.28 9664.28 11617.04 5118.70 4811.29 1876.30 2954.39 1398.73 9662.25 11390.34 130.94 167.31 2473.30 7807.21 4094.68 6781.25 3464.49 5835.52 3876.58 5694.47 2290.00 1632.59 27 E2a_E3a KnownJunction 1 63.42 252.52 2667.35 3243.04 271.73 72.34 58.43 926.59 396.78 2127.63 617.16 789.56 827.38 444.88 1826.20 562.67 331.65 558.79 1054.81 399.87 356.15 131.41 206.83 28 ER3a ExonRegion 1 20.93 191.19 3421.27 2751.24 106.78 61.75 32.33 1101.75 622.83 4028.73 5000.68 554.71 464.97 1041.87 1945.24 854.30 3356.29 419.32 1533.16 923.07 3503.59 431.97 297.20 29 E3_Da KnownBoundary 0 0.00 9.08 34.86 21.31 11.71 2.90 1.85 6.65 14.32 16.41 32.38 0.00 13.47 7.12 10.26 7.95 31.04 19.94 21.18 5.56 16.99 6.25 0.00 30 E3a_E3b KnownJunction 1 55.86 220.49 7079.38 4068.81 57.39 25.78 37.32 2411.25 1415.44 9551.49 17715.33 668.17 430.65 2376.26 3369.07 1399.63 12497.13 490.77 2611.84 2642.66 11252.81 1216.83 395.57 31 E3a_E3c KnownJunction 0 0.00 0.00 4.58 0.00 0.00 0.00 0.00 2.26 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 32 E3a_E3d NovelJunction 0 0.00 6.12 176.10 64.79 0.00 2.56 0.00 29.53 23.67 182.77 46.33 6.30 0.00 0.00 4.45 3.67 50.40 2.28 12.89 47.87 52.88 6.06 0.00 33 ER3b ExonRegion 0 6.35 12.79 40.32 66.92 3.44 2.61 6.38 19.23 16.20 32.13 37.57 1.39 1.13 21.54 36.58 27.16 31.61 42.65 24.09 26.63 22.72 7.97 3.98 34 E3_Db KnownBoundary 0 26.38 15.19 60.02 122.20 8.15 5.17 11.00 33.31 23.67 40.16 14.48 6.30 0.00 25.02 78.13 52.89 22.25 93.39 33.79 26.46 17.98 5.20 8.19 35 ER3c ExonRegion 0 14.92 20.63 127.77 107.58 23.17 20.55 7.85 54.72 32.07 137.13 279.47 5.81 6.18 46.09 80.78 39.76 169.75 62.69 45.18 65.15 141.23 25.23 9.42 36 E3_Ab KnownBoundary 0 6.82 3.09 11.77 17.95 16.13 9.88 3.80 6.53 7.61 13.89 16.27 0.00 0.00 0.00 4.45 7.86 3.83 11.98 0.00 8.69 11.12 0.00 0.00 37 E3_Ac KnownBoundary 0 10.00 3.35 27.44 15.32 34.13 13.23 9.67 8.01 5.70 10.23 9.63 0.00 0.00 4.53 6.06 6.66 11.97 4.52 4.14 8.63 5.50 5.45 0.00 38 ER3d ExonRegion 1 33.86 205.39 6787.33 4196.32 88.30 71.52 46.34 2411.19 1315.40 8855.25 21377.86 424.29 304.85 2259.15 3522.12 1245.32 12625.93 611.61 2420.88 4414.88 11166.20 1487.63 343.59 39 ER3e ExonRegion 1 37.67 351.32 9686.68 9674.40 63.26 77.31 53.54 3375.47 1536.17 10535.78 17618.90 526.22 398.45 5106.90 12806.01 3975.90 9574.20 2340.84 7349.13 7060.70 7173.55 4212.58 1410.68 40 E3_Dc KnownBoundary 0 69.35 71.70 95.77 122.79 32.43 68.71 26.23 20.50 21.85 56.49 59.59 13.65 6.82 41.44 193.21 100.40 25.25 83.74 66.45 40.78 15.38 55.23 16.13 41 E3c_E3d KnownJunction 1 25.71 554.90 9492.86 14115.59 52.38 20.16 11.66 2913.79 1100.28 7652.16 1780.24 1414.06 1380.92 6801.26 28951.18 8955.77 1122.67 3961.00 11610.22 4263.47 927.71 6614.56 3048.23 42 ER3f ExonRegion 0 77.12 48.53 63.51 83.07 13.16 28.79 21.21 26.90 25.33 50.42 59.05 4.88 1.51 40.40 92.34 81.48 39.99 65.61 49.46 41.79 22.04 17.29 17.52 43 E3_Dd KnownBoundary 0 73.42 33.02 43.14 52.44 4.33 27.20 5.56 29.82 21.47 38.49 37.22 6.00 0.00 31.02 39.43 39.31 22.72 35.32 26.17 34.83 23.54 5.51 12.38 44 ER3g ExonRegion 0 50.02 58.99 39.23 45.48 7.42 23.36 16.65 15.39 15.51 31.42 36.86 3.87 4.20 35.86 68.54 42.99 24.73 32.04 23.19 25.44 18.17 13.14 13.63 45 E3_De KnownBoundary 0 110.61 113.07 51.57 60.50 18.93 11.75 13.07 30.72 22.02 48.00 58.28 0.00 13.64 63.04 112.86 102.11 60.12 58.74 58.92 22.95 21.50 19.29 11.52 46 ER3h ExonRegion 0 23.81 25.46 62.46 92.85 9.93 13.02 13.05 28.38 16.22 57.23 35.38 10.11 5.83 68.42 161.56 67.65 18.22 35.14 65.50 34.23 20.81 35.78 22.48 47 E3_Ad KnownBoundary 0 14.37 17.04 18.33 12.99 7.05 5.28 18.59 12.90 7.18 15.04 23.48 0.00 0.00 28.90 0.00 23.33 4.30 10.57 12.24 6.33 16.93 2.57 11.78 48 ER3i ExonRegion 1 46.50 536.64 6604.92 10223.46 250.93 109.47 32.55 1910.66 772.43 4878.23 1249.19 1080.56 1149.45 2635.49 12461.04 6548.75 737.75 3426.65 6507.08 2372.51 735.43 2856.10 2354.94 49 E3_Df KnownBoundary 1 50.38 522.47 4015.62 6801.63 327.76 129.02 38.42 969.63 426.62 2222.26 722.39 781.90 867.80 446.23 1937.95 3666.22 430.29 2106.41 2787.47 1026.13 499.84 410.75 1558.64 50 E3f_E3e KnownJunction 0 0.00 0.00 819.52 1118.41 0.00 0.00 0.00 166.43 66.06 281.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 272.27 0.00 0.00 0.00 0.00 0.00 51 E3_Dg KnownBoundary 0 3.33 22.36 34.71 157.26 47.20 9.94 16.91 63.09 15.80 149.51 159.83 25.21 6.17 35.67 77.38 37.85 38.90 21.68 41.70 42.82 57.70 168.58 19.72 52 E3g_E3f KnownJunction 1 43.86 860.50 4059.94 7075.22 1860.78 854.11 112.70 862.97 383.97 2177.83 1086.01 1567.86 1681.38 1067.87 2502.39 1405.61 863.30 1502.10 2459.18 722.71 757.33 194.23 804.55 53 ER3j ExonRegion 1 48.68 591.36 4831.39 7712.29 899.05 409.30 65.14 1221.67 508.37 2978.51 1080.88 1310.10 1498.93 857.86 2817.70 3716.94 722.24 2457.88 3457.39 1151.91 770.42 517.96 1549.96 54 ER3k ExonRegion 1 46.41 615.01 4468.58 8023.69 1118.27 572.93 82.65 1068.93 464.49 2570.70 1127.43 1324.51 1539.00 874.01 2282.04 2406.15 749.07 2077.66 2525.31 836.78 716.99 419.38 1165.64 55 ER3l ExonRegion 1 13.86 49.92 107.71 228.88 156.72 116.69 128.99 72.50 22.52 172.50 151.81 35.66 50.08 57.30 124.22 40.91 62.61 47.33 60.93 38.55 66.89 83.45 28.58 56 E3_Af KnownBoundary 0 31.71 170.43 74.15 201.11 208.91 275.01 365.89 54.96 22.42 160.74 107.13 37.21 46.10 86.94 112.62 23.41 23.00 34.07 67.67 34.52 49.92 22.53 31.07 57 ER3m ExonRegion 0 186.17 1058.96 2333.31 4314.33 6977.59 7068.33 1861.31 506.57 226.96 1324.78 1558.43 727.11 872.88 957.77 1665.32 886.14 923.25 856.62 1712.76 570.73 659.53 260.83 435.34 58 ER3n ExonRegion 1 156.15 521.50 917.67 2017.52 5146.35 5490.19 1613.76 175.53 82.20 516.74 809.03 225.13 220.43 375.89 667.29 440.87 452.22 238.98 929.06 212.06 284.03 124.78 194.80 59 ER3o ExonRegion 0 0.00 22.37 1.23 4.09 149.84 166.88 63.55 1.73 0.00 1.15 44.46 30.31 14.07 14.62 46.42 32.69 23.11 0.00 12.74 2.13 24.24 0.00 2.94