Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 OSBPL2 Gene 0 83.79 84.77 52.67 69.79 70.77 103.78 44.48 77.06 68.87 73.34 64.28 66.40 63.64 72.84 73.29 75.28 65.82 84.32 59.47 54.42 63.16 56.53 55.96 2 313733 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 358053 Transcript 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 1.79 1.53 0.00 0.00 0.00 0.00 0.00 6.41 3.65 4.23 3.86 0.00 0.00 2.45 4.35 4 439951 Transcript 0 2.12 2.03 0.00 0.00 0.00 5.01 0.00 1.91 0.00 2.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.04 0.00 0.00 0.00 0.00 0.00 5 253000 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 448156 Transcript 0 2.40 0.93 1.53 1.70 1.76 3.17 2.59 1.61 5.04 5.02 1.25 6.37 0.48 5.19 3.84 2.93 4.75 4.47 1.05 3.32 7.45 1.94 2.08 7 471817 Transcript 0 0.54 0.46 2.42 0.27 0.30 2.93 1.49 3.03 2.86 3.46 3.20 1.37 4.56 1.76 6.99 5.42 2.93 2.41 1.35 3.04 1.43 0.18 0.27 8 ER1a ExonRegion 0 41.45 39.94 9.93 13.77 73.03 186.07 71.08 18.51 25.41 30.69 46.69 7.09 31.54 36.29 31.01 54.73 54.75 58.97 40.48 31.00 50.04 33.23 80.56 9 E1a_E2a KnownJunction 1 97.72 106.82 36.19 65.03 149.66 324.47 173.29 88.72 101.71 109.54 137.93 17.71 52.27 56.68 41.91 169.70 106.97 209.51 137.60 126.04 127.69 78.07 210.76 10 ER1b ExonRegion 1 73.55 81.72 27.19 38.42 113.89 270.03 124.20 62.87 72.64 80.57 112.83 15.69 70.06 57.25 51.50 137.28 87.27 143.20 107.31 92.55 98.34 71.49 177.85 11 ER2a ExonRegion 0 29.80 24.07 30.72 38.43 24.86 58.45 23.15 70.93 77.76 83.45 89.84 48.39 60.89 51.01 51.75 76.03 82.60 81.66 59.88 61.38 91.06 46.75 73.38 12 E2a_E3a KnownJunction 0 35.19 29.47 38.08 67.89 7.30 30.21 6.40 121.05 107.35 112.44 95.34 147.35 166.39 101.42 74.05 199.26 89.85 140.90 129.23 113.90 87.41 128.35 218.87 13 E2a_E3b KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 1.79 1.53 0.00 0.00 0.00 0.00 0.00 6.41 3.65 4.23 3.86 0.00 0.00 2.45 4.35 14 ER3a ExonRegion 1 42.73 31.60 43.42 67.81 53.15 67.31 27.30 119.08 107.49 109.64 84.58 122.86 169.22 91.83 65.63 189.81 80.65 192.92 123.88 87.69 93.69 72.53 167.47 15 E3_Ab KnownBoundary 0 89.94 42.82 50.41 73.75 145.84 175.30 65.14 128.27 100.26 108.52 85.81 140.45 171.90 93.71 53.90 206.61 83.40 210.13 159.63 79.51 110.64 49.23 131.37 16 ER3b ExonRegion 0 39.59 72.14 46.08 45.20 110.85 293.37 115.63 90.86 83.52 92.50 128.57 130.81 155.47 103.90 89.32 113.66 114.31 154.75 99.40 68.62 128.65 81.41 73.23 17 E3a_E4a KnownJunction 1 41.49 140.70 39.83 47.01 71.65 218.51 77.90 88.97 80.96 84.21 125.56 175.56 130.35 95.59 98.28 69.73 151.85 139.70 94.78 57.91 135.66 79.85 58.13 18 ER4a ExonRegion 0 39.46 65.98 39.73 41.07 60.52 180.92 48.19 77.76 83.27 68.51 122.84 121.74 126.38 102.62 71.92 93.07 98.33 106.05 57.80 62.79 134.92 62.97 55.29 19 E4a_E5a KnownJunction 0 63.42 60.32 38.35 40.02 61.71 109.26 20.54 77.30 90.94 78.57 139.14 100.68 156.48 129.38 82.21 112.71 96.12 108.40 82.45 81.75 149.13 74.58 72.05 20 I4_AR5 ActiveIntronRegion 0 20.59 0.00 3.68 6.81 2.68 1.83 6.92 3.46 4.94 1.15 0.00 0.00 0.00 0.74 2.64 2.84 10.50 7.39 10.14 0.00 5.61 0.00 5.47 21 ER5a ExonRegion 0 35.10 29.07 49.64 51.26 25.25 65.94 26.29 87.91 93.74 97.32 119.84 134.66 160.36 142.44 110.01 156.25 118.54 173.03 97.66 76.83 125.68 129.64 102.98 22 E5a_E6a KnownJunction 0 18.97 32.30 48.73 41.12 23.77 31.74 34.67 64.49 117.74 102.96 123.40 115.24 86.03 111.84 43.88 71.01 107.43 110.31 32.00 56.06 150.00 62.52 24.16 23 ER6a ExonRegion 0 35.07 44.57 29.62 40.09 41.45 77.09 36.75 68.13 76.04 87.55 85.92 99.27 100.40 111.85 69.84 90.62 74.03 122.67 66.70 61.83 82.53 65.10 68.92 24 E6_Da NovelBoundary 1 24.97 0.00 10.70 7.16 12.48 15.79 7.51 2.34 9.20 9.83 10.16 39.01 13.64 9.42 8.90 31.87 13.09 15.59 17.41 8.76 6.30 5.39 3.41 25 E6a_E7a KnownJunction 0 58.16 59.86 47.19 103.32 60.02 203.97 77.77 149.10 151.13 157.81 85.39 116.29 123.21 110.48 72.81 115.01 116.41 248.84 135.82 71.46 99.40 121.55 88.18 26 I6_AR2 ActiveIntronRegion 0 10.04 18.51 5.95 9.86 4.13 4.33 9.81 4.90 7.16 9.30 4.31 4.56 5.39 6.21 6.46 8.51 10.02 10.82 7.26 14.10 5.85 4.80 5.29 27 I6_SR3 SilentIntronRegion 0 9.75 20.73 1.44 7.31 6.25 4.91 9.58 8.97 7.46 7.31 7.42 10.28 4.97 5.38 3.07 6.98 12.44 11.30 10.66 13.11 6.47 4.57 7.79 28 I6_SR5 SilentIntronRegion 0 11.74 7.66 1.07 5.88 9.05 2.75 6.97 4.48 5.92 7.57 9.75 7.10 6.33 5.72 9.04 9.43 16.35 14.31 6.74 13.78 8.07 1.82 5.74 29 E7_Aa NovelBoundary 0 19.41 25.13 3.90 12.42 0.00 18.57 10.73 15.12 15.54 18.59 4.00 5.85 13.64 7.12 14.59 23.58 3.93 36.52 4.05 15.34 2.35 8.51 13.15 30 ER7a ExonRegion 0 76.29 81.72 42.51 58.99 63.76 152.66 60.17 85.71 92.76 101.54 115.96 116.09 145.31 137.14 95.01 143.86 129.17 151.34 121.90 69.96 113.70 103.47 104.61 31 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.64 5.00 0.00 6.82 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E7a_E9a KnownJunction 0 38.23 69.07 52.57 70.05 68.51 76.38 58.25 55.12 96.30 97.32 118.56 86.73 112.33 110.84 73.18 137.83 145.68 100.77 113.04 79.00 116.57 88.73 87.33 33 ER8a ExonRegion 0 8.47 1.09 0.72 2.61 4.66 6.04 3.56 0.24 5.88 5.54 2.13 3.66 3.48 6.61 4.85 0.00 7.63 7.45 3.02 7.89 9.04 3.99 2.18 34 E8_Da KnownBoundary 0 9.11 3.35 1.83 6.69 0.00 4.43 0.00 1.60 10.19 10.61 0.00 13.80 6.82 9.18 13.97 0.00 7.57 16.87 0.00 14.45 2.59 5.39 3.33 35 ER8b ExonRegion 0 2.40 0.93 1.53 1.70 1.76 3.17 2.59 1.61 5.04 5.02 1.25 6.37 0.48 5.19 3.84 2.93 4.75 4.47 1.05 3.32 7.45 1.94 2.08 36 ER9a ExonRegion 0 43.90 51.69 38.84 47.30 33.10 68.67 40.33 60.05 74.88 87.38 101.78 90.16 117.82 107.61 70.87 94.81 118.68 105.87 86.74 88.12 107.92 65.71 49.95 37 E9_Da NovelBoundary 0 27.63 3.29 6.03 4.73 3.65 27.48 1.72 17.29 9.06 24.82 17.69 0.00 13.64 19.31 9.89 31.70 16.64 34.53 20.33 14.57 14.21 17.76 24.24 38 E9a_E10a KnownJunction 0 32.75 57.62 33.03 47.91 43.89 90.69 47.03 77.84 72.40 79.19 108.19 145.55 116.06 126.55 88.88 98.26 90.51 76.73 56.85 59.25 88.28 59.15 41.74 39 I9 Intron 0 24.19 9.50 5.83 11.48 12.50 16.45 9.27 12.34 11.31 15.12 6.89 14.96 14.38 12.35 12.86 17.17 15.41 18.53 12.14 16.47 13.81 7.94 12.98 40 I9_SR1 SilentIntronRegion 0 27.45 10.96 6.92 13.61 14.43 17.90 10.22 14.64 13.41 17.93 8.17 17.74 15.36 13.87 13.45 19.92 17.80 21.70 13.92 18.60 15.72 9.11 14.97 41 E10_Aa NovelBoundary 0 43.42 18.35 8.96 4.73 22.41 33.84 21.55 20.99 17.88 14.85 2.68 24.31 6.82 6.95 13.35 21.96 7.29 4.23 0.00 5.18 7.04 2.63 36.11 42 ER10a ExonRegion 0 61.80 71.36 65.95 64.60 88.75 158.09 76.78 102.96 87.69 106.70 131.67 143.02 136.48 150.03 98.48 113.60 141.61 109.69 70.01 85.74 114.67 68.46 69.34 43 E10a_E11a KnownJunction 0 65.42 101.76 49.17 58.20 91.34 153.72 79.54 113.61 112.70 110.83 151.09 123.04 123.69 159.63 162.93 126.04 119.12 133.02 69.65 121.25 119.29 81.62 83.49 44 ER11a ExonRegion 0 61.14 74.41 71.80 66.02 76.95 146.28 61.21 101.77 109.06 117.87 134.69 152.40 162.15 127.74 117.10 120.87 127.30 135.91 83.54 88.68 114.50 85.53 68.70 45 E11_Da NovelBoundary 0 3.70 31.90 15.67 12.19 12.48 14.42 7.33 24.32 20.05 6.04 9.58 25.21 0.00 11.89 13.85 8.72 17.30 19.65 0.00 14.76 7.23 5.63 8.45 46 E11a_E12a KnownJunction 0 66.97 54.79 74.33 64.93 27.59 77.29 26.28 100.92 93.23 96.86 108.61 173.91 105.03 105.30 81.09 113.05 106.22 116.98 54.50 78.87 85.69 58.23 68.46 47 I11 Intron 0 15.29 17.59 11.99 21.17 16.08 14.72 9.89 15.66 14.58 10.27 8.80 10.11 12.11 9.89 10.09 9.81 9.06 12.84 9.96 11.24 11.33 12.88 12.96 48 I11_AR2 ActiveIntronRegion 0 22.45 24.01 16.35 30.54 20.60 19.62 14.49 21.01 20.29 13.18 10.27 16.79 18.35 11.68 10.67 10.54 10.96 10.61 13.29 12.34 9.75 17.77 14.74 49 I11_SR2 SilentIntronRegion 0 9.80 14.00 9.19 15.17 14.11 8.78 5.62 13.43 9.84 8.51 8.90 4.56 7.53 9.45 10.78 8.49 6.69 15.28 7.24 9.91 16.39 9.21 13.30 50 E12_Aa NovelBoundary 0 17.86 8.95 7.39 31.23 15.87 30.55 6.76 24.77 13.14 9.64 17.64 7.65 0.00 23.60 0.00 19.74 13.18 20.19 0.00 3.13 14.39 14.63 12.21 51 ER12a ExonRegion 0 58.33 51.67 64.51 59.52 38.70 99.07 38.41 107.07 106.80 99.06 99.72 131.36 85.87 105.37 112.50 109.65 93.81 141.16 55.21 70.46 111.40 80.93 67.02 52 E12a_E13a KnownJunction 0 73.72 55.45 62.21 69.29 78.78 141.68 70.70 91.60 89.41 68.42 50.54 91.38 91.71 132.38 131.90 93.39 93.60 107.53 65.32 62.13 94.77 51.56 63.42 53 E12a_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 8.18 0.00 2.09 0.00 4.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 54 ER13a ExonRegion 0 91.27 68.14 57.72 75.31 48.64 154.22 63.11 81.66 87.37 77.25 76.75 38.44 62.56 102.53 92.07 93.55 77.94 141.04 61.04 56.90 76.99 49.75 56.67 55 E13a_E14b KnownJunction 0 71.35 76.10 37.79 52.44 29.46 119.53 47.74 46.87 56.71 59.66 58.86 32.26 46.10 73.87 73.68 61.27 76.02 74.62 39.72 63.98 81.73 29.45 27.40 56 ER14a ExonRegion 0 0.54 0.46 2.42 0.27 0.30 2.93 1.49 3.03 2.86 3.46 3.20 1.37 4.56 1.76 6.99 5.42 2.93 2.41 1.35 3.04 1.43 0.18 0.27 57 E14_Ab KnownBoundary 0 3.11 0.00 1.69 0.00 0.00 2.27 4.02 8.38 1.79 0.00 0.00 0.00 0.00 7.06 5.56 4.36 0.00 2.24 0.00 9.65 0.00 0.00 0.00 58 ER14b ExonRegion 0 61.78 52.76 40.90 44.88 40.49 115.53 36.44 46.19 67.71 65.20 65.44 22.42 37.21 84.38 71.79 53.93 88.24 64.57 54.19 50.24 85.43 43.31 39.97 59 E14a_E15a KnownJunction 0 110.54 99.46 77.26 93.23 29.46 126.92 21.42 75.17 112.67 123.59 69.70 6.30 6.49 92.18 48.58 55.80 66.39 112.75 77.37 38.93 89.52 44.27 28.08 60 ER15a ExonRegion 0 115.18 115.50 64.22 91.14 91.39 102.32 45.88 85.67 67.66 73.04 48.56 55.54 42.53 61.61 75.74 64.96 51.12 69.76 55.76 52.31 45.52 53.42 51.24 61 ER15b ExonRegion 0 4.23 4.07 0.00 0.00 0.00 1.83 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00